65-71-4 | Thymine

Packsize	Purity	Availability	Price	Discounted Price
1g	97%	in stock	$15.00	$10.00
5g	97%	in stock	$16.00	$11.00
25g	97%	in stock	$20.00	$14.00
100g	97%	in stock	$26.00	$18.00
500g	97%	in stock	$100.00	$70.00
1kg	97%	in stock	$198.00	$138.00
5kg	97%	in stock	$583.00	$408.00
10kg	97%	in stock	$1,062.00	$743.00

Description

• Catalog Number: AB79695
• Chemical Name: Thymine
• CAS Number: 65-71-4
• Molecular Formula: C5H6N2O2
• Molecular Weight: 126.1133
• MDL Number: MFCD00006026
• SMILES: Cc1c[nH]c(=O)[nH]c1=O
• NSC Number: 14705

Computed Properties

• Complexity: 195
• Covalently-Bonded Unit Count: 1
• Heavy Atom Count: 9
• Hydrogen Bond Acceptor Count: 2
• Hydrogen Bond Donor Count: 2
• XLogP3: -0.6

Literature

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  Investigational new drugs 20170101

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• Discovery of a novel non-steroidal GR antagonist with in vivo efficacy in the olanzapine-induced weight gain model in the rat.

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  Langmuir : the ACS journal of surfaces and colloids 20120227

• Suppression of mesoscopic order by complementary interactions in supramolecular polymers.

  Journal of the American Chemical Society 20120227

• DNA sequence context conceals α-anomeric lesions.

  Journal of molecular biology 20120224

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  Analytical chemistry 20120221

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  Analytical chemistry 20120221

• Sequence context effect on strand slippage in natural DNA primer-templates.

  The journal of physical chemistry. B 20120216

• Interaction and protection mechanism between Li@C(60) and nucleic acid bases (NABs): performance of PM6-DH2 on noncovalent interaction of NABs-Li@C60.

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  Biosensors & bioelectronics 20120215

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  Journal of the American Chemical Society 20120215

• Patterned polymeric multilayered assemblies through hydrogen bonding and metal coordination.

  Langmuir : the ACS journal of surfaces and colloids 20120214

• Structural studies of the spinosyn rhamnosyltransferase, SpnG.

  Biochemistry 20120214

• Excess-electron injection and transfer in terthiophene-modified DNA: terthiophene as a photosensitizing electron donor for thymine, cytosine, and adenine.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20120213

• Protein detection by nanopores equipped with aptamers.

  Journal of the American Chemical Society 20120208

• Biochemical characterization of recombinant β-glucosyltransferase and analysis of global 5-hydroxymethylcytosine in unique genomes.

  Biochemistry 20120207

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  The Journal of biological chemistry 20120203

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  The Journal of investigative dermatology 20120201

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  Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life 20120201

• Mycobacterium tuberculosis thymidylate synthase gene thyX is essential and potentially bifunctional, while thyA deletion confers resistance to p-aminosalicylic acid.

  Microbiology (Reading, England) 20120201

• DNA glycosylases: in DNA repair and beyond.

  Chromosoma 20120201

• Testing a portable Raman instrument: the detection of biomarkers in gypsum powdered matrix under gypsum crystals.

  Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy 20120201

• Light-regulated and cell-specific methylation of the maize PEPC promoter.

  Journal of experimental botany 20120201

• B-SOLANA: an approach for the analysis of two-base encoding bisulfite sequencing data.

  Bioinformatics (Oxford, England) 20120201

• Identification of cis-acting promoter elements in cold- and dehydration-induced transcriptional pathways in Arabidopsis, rice, and soybean.

  DNA research : an international journal for rapid publication of reports on genes and genomes 20120201

• Two novel CYP11B1 mutations in congenital adrenal hyperplasia due to steroid 11β hydroxylase deficiency in a Tunisian family.

  General and comparative endocrinology 20120201

• A reassessment of risk associated with dietary intake of ochratoxin A based on a lifetime exposure model.

  Critical reviews in toxicology 20120201

• Genotype and haplotype analysis of WNT genes in non-syndromic cleft lip with or without cleft palate.

  European journal of oral sciences 20120201

• Comparison of insertional RNA editing in Myxomycetes.

  PLoS computational biology 20120201

• Back to BAC: the use of infectious clone technologies for viral mutagenesis.

  Viruses 20120201

• Nano-engineered optimal templates for surface-plasmon enhanced Raman scattering.

  Journal of nanoscience and nanotechnology 20120201

• Improved synthesis of 2'-deoxyadenosine and 5-methyluridine by Escherichia coli using an auto-induction system.

  World journal of microbiology & biotechnology 20120201

• Structural studies of AntD: an N-Acyltransferase involved in the biosynthesis of D-Anthrose.

  Biochemistry 20120131

• Synthesis and oligomerization of Fmoc/Boc-protected PNA monomers of 2,6-diaminopurine, 2-aminopurine and thymine.

  Organic & biomolecular chemistry 20120128

• Dynamics and mechanism of DNA repair in a biomimetic system: flavin-thymine dimer adduct.

  Journal of the American Chemical Society 20120125

• A fishnet electrochemical Hg2+ sensing strategy based on gold nanoparticle-bioconjugate and thymine-Hg(2+)-thymine coordination chemistry.

  The Analyst 20120121

• Can cytosine, thymine and uracil be formed in interstellar regions? A theoretical study.

  Organic & biomolecular chemistry 20120121

• Discrete assembly of synthetic peptide-DNA triplex structures from polyvalent melamine-thymine bifacial recognition.

  Journal of the American Chemical Society 20120118

• Electrochemical oxidation of purine and pyrimidine bases based on the boron-doped nanotubes modified electrode.

  Biosensors & bioelectronics 20120115

• A DNA aptamer sensor for 8-oxo-7,8-dihydroguanine.

  Bioorganic & medicinal chemistry letters 20120115

• Thymine dimer photoreversal in purine-containing trinucleotides.

  The journal of physical chemistry. B 20120112

• Nonradiative deactivation mechanisms of uracil, thymine, and 5-fluorouracil: a comparative ab initio study.

  The journal of physical chemistry. A 20120112

• DNA-templated assembly of naphthalenediimide arrays.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20120102

• Enzymology of the branched-chain amino acid oxidation disorders: the valine pathway.

  Journal of inherited metabolic disease 20120101

• Measurement of inelastic cross sections for low-energy electron scattering from DNA bases.

  International journal of radiation biology 20120101

• Molecular electrostatic potentials of DNA base-base pairing and mispairing.

  Journal of molecular modeling 20120101

• Theoretical ionization and capture cross sections for DNA nucleobases impacted by light ions.

  International journal of radiation biology 20120101

• De novo design, synthesis and spectroscopic characterization of chiral benzimidazole-derived amino acid Zn(II) complexes: Development of tryptophan-derived specific hydrolytic DNA artificial nuclease agent.

  Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy 20120101

• Kinetic and in silico analysis of the slow-binding inhibition of human poly(A)-specific ribonuclease (PARN) by novel nucleoside analogues.

  Biochimie 20120101

• Development of a multiplex DNA-based traceability tool for crop plant materials.

  Analytical and bioanalytical chemistry 20120101

• An AT mutational bias in the tiny GC-rich endosymbiont genome of Hodgkinia.

  Genome biology and evolution 20120101

• RNA single strands bind to a conserved surface of the major cold shock protein in crystals and solution.

  RNA (New York, N.Y.) 20120101

• Effect of inter-renal aortic coarctation-induced hypertension on function and expression of vascular α(1A)- and α(1D)-adrenoceptors.

  Canadian journal of physiology and pharmacology 20120101

• Detection of methicillin-resistant Staphylococcus aureus (MRSA) from nasal samples by multiplex real-time PCR based on dual priming AT-rich primers.

  Folia microbiologica 20120101

• Embryonic lethality in mice lacking mismatch-specific thymine DNA glycosylase is partially prevented by DOPS, a precursor of noradrenaline.

  The Tohoku journal of experimental medicine 20120101

• Alternative DNA base pairing through metal coordination.

  Metal ions in life sciences 20120101

• Metal-mediated base pairs in nucleic acids with purine- and pyrimidine-derived nucleosides.

  Metal ions in life sciences 20120101

• Improved synthesis strategy for peptide nucleic acids (PNA) appropriate for cell-specific fluorescence imaging.

  International journal of medical sciences 20120101

• The complete mitochondrial genome of the damsel bug Alloeorhynchus bakeri (Hemiptera: Nabidae).

  International journal of biological sciences 20120101

• The (α-4) photoconjugates of 5-methylcytosine, 1,5-dimethylcytosine, 1-methylthymine and thymidine.

  Photochemistry and photobiology 20120101

• Assessment of thymidine phosphorylase function: measurement of plasma thymidine (and deoxyuridine) and thymidine phosphorylase activity.

  Methods in molecular biology (Clifton, N.J.) 20120101

• High-dose clevudine impairs mitochondrial function and glucose-stimulated insulin secretion in INS-1E cells.

  BMC gastroenterology 20120101

• Inhibition of microRNA function by antimiR oligonucleotides.

  Silence 20120101

• A negative screen for mutations in calstabin 1 and 2 genes in patients with dilated cardiomyopathy.

  Journal of negative results in biomedicine 20120101

• Removal of uracil by uracil DNA glycosylase limits pemetrexed cytotoxicity: overriding the limit with methoxyamine to inhibit base excision repair.

  Cell death & disease 20120101

• Colour patterns do not diagnose species: quantitative evaluation of a DNA barcoded cryptic bumblebee complex.

  PloS one 20120101

• Identifying and characterizing alternative molecular markers for the symbiotic and free-living dinoflagellate genus Symbiodinium.

  PloS one 20120101

• Generation of long insert pairs using a Cre-LoxP Inverse PCR approach.

  PloS one 20120101

• Locked nucleic acid flow cytometry-fluorescence in situ hybridization (LNA flow-FISH): a method for bacterial small RNA detection.

  Journal of visualized experiments : JoVE 20120101

• α-Adducin Gly460Trp gene mutation and essential hypertension in a Chinese population: a meta-analysis including 10,960 subjects.

  PloS one 20120101

• HIV-1 polymerase inhibition by nucleoside analogs: cellular- and kinetic parameters of efficacy, susceptibility and resistance selection.

  PLoS computational biology 20120101

• High-resolution analysis of cytosine methylation in ancient DNA.

  PloS one 20120101

• Bisulfite sequencing reveals that Aspergillus flavus holds a hollow in DNA methylation.

  PloS one 20120101

• Highlight: tiny bacterial genome opens a huge mystery: AT mutational bias in Hodgkinia.

  Genome biology and evolution 20120101

• A transcriptional-switch model for Slr1738-controlled gene expression in the cyanobacterium Synechocystis.

  BMC structural biology 20120101

• The viral and cellular microRNA targetome in lymphoblastoid cell lines.

  PLoS pathogens 20120101

• Genomic and epigenomic responses to chronic stress involve miRNA-mediated programming.

  PloS one 20120101

• Genomic and SNP analyses demonstrate a distant separation of the hospital and community-associated clades of Enterococcus faecium.

  PloS one 20120101

• Genetic and epigenetic alterations of the NF2 gene in sporadic vestibular schwannomas.

  PloS one 20120101

• Analysis of cell cycle position in mammalian cells.

  Journal of visualized experiments : JoVE 20120101

• Biological conversion assay using Clostridium phytofermentans to estimate plant feedstock quality.

  Biotechnology for biofuels 20120101

• The application of methylation specific electrophoresis (MSE) to DNA methylation analysis of the 5' CpG island of mucin in cancer cells.

  BMC cancer 20120101

• Duplication and diversification of the LEAFY HULL STERILE1 and Oryza sativa MADS5 SEPALLATA lineages in graminoid Poales.

  EvoDevo 20120101

• An easy-to-use simulation program demonstrates variations in bacterial cell cycle parameters depending on medium and temperature.

  PloS one 20120101

• Regulation of the let-7a-3 promoter by NF-κB.

  PloS one 20120101

• Sesbania mosaic virus (SeMV) infectious clone: possible mechanism of 3' and 5' end repair and role of polyprotein processing in viral replication.

  PloS one 20120101

• Winnowing DNA for rare sequences: highly specific sequence and methylation based enrichment.

  PloS one 20120101

• Primer extension mutagenesis powered by selective rolling circle amplification.

  PloS one 20120101

• Syntheses of 1-[2-(Phosphonomethoxy)Alkyl] thymine monophosphates and an evaluation of their inhibitory activity toward human thymidine phosphorylase.

  Nucleosides, nucleotides & nucleic acids 20120101

• New thymine-based derivative of nitrogen mustards.

  Nucleosides, nucleotides & nucleic acids 20120101

• Small fragment homologous replacement: evaluation of factors influencing modification efficiency in an eukaryotic assay system.

  PloS one 20120101

• Human polyomaviruses identification by logic mining techniques.

  Virology journal 20120101

• CpGPAP: CpG island predictor analysis platform.

  BMC genetics 20120101

• On docking, scoring and assessing protein-DNA complexes in a rigid-body framework.

  PloS one 20120101

• Bead array direct rRNA capture assay (rCapA) for amplification free speciation of Mycobacterium cultures.

  PloS one 20120101

• Aloe vera induced biomimetic assemblage of nucleobase into nanosized particles.

  PloS one 20120101

• Characterization of magnesium requirement of human 5'-tyrosyl DNA phosphodiesterase mediated reaction.

  BMC research notes 20120101

• Pseudoscorpion mitochondria show rearranged genes and genome-wide reductions of RNA gene sizes and inferred structures, yet typical nucleotide composition bias.

  BMC evolutionary biology 20120101

• DNA repair in human pluripotent stem cells is distinct from that in non-pluripotent human cells.

  PloS one 20120101

• Phylo: a citizen science approach for improving multiple sequence alignment.

  PloS one 20120101

• Dichotomy in the definition of prescriptive information suggests both prescribed data and prescribed algorithms: biosemiotics applications in genomic systems.

  Theoretical biology & medical modelling 20120101

• Human cryptochrome-1 confers light independent biological activity in transgenic Drosophila correlated with flavin radical stability.

  PloS one 20120101

• Disinfection of ocular cells and tissues by atmospheric-pressure cold plasma.

  PloS one 20120101

• Synonymous codon ordering: a subtle but prevalent strategy of bacteria to improve translational efficiency.

  PloS one 20120101

• Codon Deviation Coefficient: a novel measure for estimating codon usage bias and its statistical significance.

  BMC bioinformatics 20120101

• High resolution genetic mapping by genome sequencing reveals genome duplication and tetraploid genetic structure of the diploid Miscanthus sinensis.

  PloS one 20120101

• Genetic basis of rifampicin resistance in methicillin-resistant Staphylococcus aureus suggests clonal expansion in hospitals in Cape Town, South Africa.

  BMC microbiology 20120101

• High recovery of cell-free methylated DNA based on a rapid bisulfite-treatment protocol.

  BMC molecular biology 20120101

• Low molecular weight chitosan nanoparticulate system at low N:P ratio for nontoxic polynucleotide delivery.

  International journal of nanomedicine 20120101

• Phylogenetic position of a copper age sheep (Ovis aries) mitochondrial DNA.

  PloS one 20120101

• Description and molecular diagnosis of a new species of Brunfelsia (Solanaceae) from the Bolivian and Argentinean Andes.

  PhytoKeys 20120101

• Flexible programming of cell-free protein synthesis using magnetic bead-immobilized plasmids.

  PloS one 20120101

• Modulating Anti-MicroRNA-21 Activity and Specificity Using Oligonucleotide Derivatives and Length Optimization.

  ISRN pharmaceutics 20120101

• The chromatin remodeling factor SMARCB1 forms a complex with human cytomegalovirus proteins UL114 and UL44.

  PloS one 20120101

• Temporal patterns of nucleotide misincorporations and DNA fragmentation in ancient DNA.

  PloS one 20120101

• Mutations increased overexpression of Notch1 in T-cell acute lymphoblastic leukemia.

  Cancer cell international 20120101

• On the existence of wavelet symmetries in archaea DNA.

  Computational and mathematical methods in medicine 20120101

• Conformational changes in DNA upon ligand binding monitored by circular dichroism.

  International journal of molecular sciences 20120101

• A reinvestigation of somatic hypermethylation at the PTEN CpG island in cancer cell lines.

  Biological procedures online 20120101

• Dysregulation of ion homeostasis by antifungal agents.

  Frontiers in microbiology 20120101

• A family-wide RT-PCR assay for detection of paramyxoviruses and application to a large-scale surveillance study.

  PloS one 20120101

• Rational incorporation of selenium into temozolomide elicits superior antitumor activity associated with both apoptotic and autophagic cell death.

  PloS one 20120101

• Molecular monitoring of Plasmodium falciparum drug susceptibility at the time of the introduction of artemisinin-based combination therapy in Yaoundé, Cameroon: implications for the future.

  Malaria journal 20120101

• Computer-based annotation of putative AraC/XylS-family transcription factors of known structure but unknown function.

  Journal of biomedicine & biotechnology 20120101

• Free radicals and extrinsic skin aging.

  Dermatology research and practice 20120101

• Validation of bacterial replication termination models using simulation of genomic mutations.

  PloS one 20120101

• Analysis of microsatellite polymorphism in inbred knockout mice.

  PloS one 20120101

• Determinants of bacteriophage 933W repressor DNA binding specificity.

  PloS one 20120101

• Micro-Raman spectroscopy of silver nanoparticle induced stress on optically-trapped stem cells.

  PloS one 20120101

• Apolipoprotein E gene polymorphism: effects on plasma lipids and risk of type 2 diabetes and coronary artery disease.

  Cardiovascular diabetology 20120101

• MsDpo4-a DinB Homolog from Mycobacterium smegmatis-Is an Error-Prone DNA Polymerase That Can Promote G:T and T:G Mismatches.

  Journal of nucleic acids 20120101

• Plastics and carcinogenesis: The example of vinyl chloride.

  Journal of carcinogenesis 20120101

• Genetic Diversity of Toll-Like Receptors and Immunity to M. leprae Infection.

  Journal of tropical medicine 20120101

• Symbiodinium transcriptomes: genome insights into the dinoflagellate symbionts of reef-building corals.

  PloS one 20120101

• The distribution of a germline methylation marker suggests a regional mechanism of LINE-1 silencing by the piRNA-PIWI system.

  BMC genetics 20120101

• Transmission and selection of macrolide resistant Mycoplasma genitalium infections detected by rapid high resolution melt analysis.

  PloS one 20120101

• The DNA glycosylases Ogg1 and Nth1 do not contribute to Ig class switching in activated mouse splenic B cells.

  PloS one 20120101

• Study of a US cohort supports the role of ZNF644 and high-grade myopia susceptibility.

  Molecular vision 20120101

• PIAS1 is a GATA4 SUMO ligase that regulates GATA4-dependent intestinal promoters independent of SUMO ligase activity and GATA4 sumoylation.

  PloS one 20120101

• Orangutan Alu quiescence reveals possible source element: support for ancient backseat drivers.

  Mobile DNA 20120101

• Antagonist effect of triptolide on AKT activation by truncated retinoid X receptor-alpha.

  PloS one 20120101

• How does viral DNA find the nucleus of an infected cell?

  GMS Krankenhaushygiene interdisziplinar 20120101

• Efficient reverse transcription using locked nucleic acid nucleotides towards the evolution of nuclease resistant RNA aptamers.

  PloS one 20120101

• Evidence for a Rad18-independent frameshift mutagenesis pathway in human cell-free extracts.

  PloS one 20120101

• Allele specific locked nucleic acid quantitative PCR (ASLNAqPCR): an accurate and cost-effective assay to diagnose and quantify KRAS and BRAF mutation.

  PloS one 20120101

• The impact of the organism on its descendants.

  Genetics research international 20120101

• Environmental heterogeneity and phenotypic divergence: can heritable epigenetic variation aid speciation?

  Genetics research international 20120101

• Zinc finger nucleases for targeted mutagenesis and repair of the sickle-cell disease mutation: An in-silico study.

  BMC blood disorders 20120101

• A DNA network as an information processing system.

  International journal of molecular sciences 20120101

• Comparable ages for the independent origins of electrogenesis in African and South American weakly electric fishes.

  PloS one 20120101

• Electrospray ionization mass spectrometry: a technique to access the information beyond the molecular weight of the analyte.

  International journal of analytical chemistry 20120101

• Stable gene targeting in human cells using single-strand oligonucleotides with modified bases.

  PloS one 20120101

• Crystal structure of a complex of DNA with one AT-hook of HMGA1.

  PloS one 20120101

• SUMOylation of paraflagellar rod protein, PFR1, and its stage-specific localization in Trypanosoma cruzi.

  PloS one 20120101

• Thermoregulation of capsule production by Streptococcus pyogenes.

  PloS one 20120101

• Numerical characterization of DNA sequence based on dinucleotides.

  TheScientificWorldJournal 20120101

• Highly sensitive and selective photoelectrochemical DNA sensor for the detection of Hg²⁺ in aqueous solutions.

  Biosensors & bioelectronics 20120101

• Is a genome a codeword of an error-correcting code?

  PloS one 20120101

• Chemical constituents and biological activities of the genus Subergorgia.

  Pharmacognosy reviews 20120101

• Metal Ion Chelates as Surrogates of Nucleobases for the Recognition of Nucleic Acid Sequences: The Pd(2+) Complex of 2,6-Bis(3,5-dimethylpyrazol-1-yl)purine Riboside.

  Journal of nucleic acids 20120101

• Tumour cell generation of inducible regulatory T-cells in multiple myeloma is contact-dependent and antigen-presenting cell-independent.

  PloS one 20120101

• The integrative taxonomic approach reveals host specific species in an encyrtid parasitoid species complex.

  PloS one 20120101

• Thermodynamic Control of Small RNA-Mediated Gene Silencing.

  Frontiers in genetics 20120101

• The cadmium-mercaptoacetic acid complex contributes to the genotoxicity of mercaptoacetic acid-coated CdSe-core quantum dots.

  International journal of nanomedicine 20120101

• (α,α-dimethyl)glycyl (dmg) PNAs: achiral PNA analogs that form stronger hybrids with cDNA relative to isosequential RNA.

  Artificial DNA, PNA & XNA 20120101

• Enzymatic synthesis of DNA strands containing α-L-LNA (α-L-configured locked nucleic acid) thymine nucleotides.

  Artificial DNA, PNA & XNA 20120101

• Probing Retroviral and Retrotransposon Genome Structures: The 'SHAPE' of Things to Come.

  Molecular biology international 20120101

• Experimental murine myopia induces collagen type Iα1 (COL1A1) DNA methylation and altered COL1A1 messenger RNA expression in sclera.

  Molecular vision 20120101

• Energy and redox homeostasis in tumor cells.

  International journal of cell biology 20120101

• Clinical and functional characterization of a patient carrying a compound heterozygous pericentrin mutation and a heterozygous IGF1 receptor mutation.

  PloS one 20120101

• Improved efficiency and robustness in qPCR and multiplex end-point PCR by twisted intercalating nucleic acid modified primers.

  PloS one 20120101

• A suggested new bacteriophage genus: 'Viunalikevirus'.

  Archives of virology 20120101

• The Genetic Diversity and Structure of Linkage Disequilibrium of the MTHFR Gene in Populations of Northern Eurasia.

  Acta naturae 20120101

• Structural and functional properties of CiNTH, an endonuclease III homologue of the ascidian Ciona intestinalis: critical role of N-terminal region.

  Genes & genetic systems 20120101

• Thiamine responsive megaloblastic anemia syndrome associated with patent ductus arteriosus: First case report from Kashmir Valley of the Indian subcontinent.

  Indian journal of endocrinology and metabolism 20120101

• [Model of cytosine-, thymine-containing olygodeoxyribonucleotide protonation in solution].

  Biofizika 20120101

• Curcumin Protects against UVB-Induced Skin Cancers in SKH-1 Hairless Mouse: Analysis of Early Molecular Markers in Carcinogenesis.

  Evidence-based complementary and alternative medicine : eCAM 20120101

• The largely normal response to Toll-like receptor 7 and 9 stimulation and the enhanced expression of SIGIRR by B cells in systemic lupus erythematosus.

  PloS one 20120101

• Updating our view of organelle genome nucleotide landscape.

  Frontiers in genetics 20120101

• The essential role of the 3' terminal template base in the first steps of protein-primed DNA replication.

  PloS one 20120101

• Electron donor-acceptor interactions with flanking purines influence the efficiency of thymine photodimerization.

  Journal of the American Chemical Society 20111228

• A fluorescence turn-on sensor for iodide based on a thymine-Hg(II)-thymine complex.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20111223

• Formation of N-N cross-links in DNA by reaction of radiation-produced DNA base pair diradicals: a DFT study.

  The journal of physical chemistry. B 20111222

• An electrochemical sensor based on single-stranded DNA-poly(sulfosalicylic acid) composite film for simultaneous determination of adenine, guanine, and thymine.

  Analytical biochemistry 20111215

• C(5) modified uracil derivatives showing antiproliferative and erythroid differentiation inducing activities on human chronic myelogenous leukemia K562 cells.

  European journal of pharmacology 20111215

• Determination of pyrimidine and purine bases by reversed-phase capillary liquid chromatography with at-line surface-enhanced Raman spectroscopic detection employing a novel SERS substrate based on ZnS/CdSe silver-quantum dots.

  Analytical chemistry 20111215

• 'Turn-on' chemiluminescence sensor for the highly selective and ultrasensitive detection of Hg2+ ions based on interstrand cooperative coordination and catalytic formation of gold nanoparticles.

  Analytical chemistry 20111215

• Preferential base pairing modes of T·T mismatches.

  FEBS letters 20111215

• Order-disorder transition in supramolecular polymers.

  Journal of the American Chemical Society 20111214

• DNA-binding small-ligand-immobilized surface plasmon resonance biosensor for detecting thymine-related single-nucleotide polymorphisms.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20111209

• Label-free DNA hybridization detection and single base-mismatch discrimination using CE-ICP-MS assay.

  The Analyst 20111207

• Single oligoarray-based detection of specific M918T mutation in RET oncogene in multiple endocrine neoplasia type 2B.

  Clinical and experimental medicine 20111201

• Quantum-chemical study of interactions of trans-resveratrol with guanine-thymine dinucleotide and DNA-nucleobases.

  Journal of molecular modeling 20111201

• Pharmacokinetics of orally administered uracil in healthy volunteers and in DPD-deficient patients, a possible tool for screening of DPD deficiency.

  Cancer chemotherapy and pharmacology 20111201

• Binding of metal ions by pyrimidine base pairs in DNA duplexes.

  Chemical Society reviews 20111201

• Chimeric aptamers in cancer cell-targeted drug delivery.

  Critical reviews in biochemistry and molecular biology 20111201

• Stabilization of DNA duplex by 2-substituted adenine as a minor groove modifier.

  Bioorganic & medicinal chemistry letters 20111201

• Altering the electrostatic potential in the major groove: thermodynamic and structural characterization of 7-deaza-2'-deoxyadenosine:dT base pairing in DNA.

  The journal of physical chemistry. B 20111201

• How flexible are DNA constituents? The quantum-mechanical study.

  Journal of biomolecular structure & dynamics 20111201

• Generation and replication-dependent dilution of 5fC and 5caC during mouse preimplantation development.

  Cell research 20111201

• 15N and 13C{14N} NMR investigation of the major nitrogen-containing segment in an aquatic fulvic acid: evidence for a hydantoin derivative.

  Magnetic resonance in chemistry : MRC 20111201

• Structural insights into the inhibition of cytosolic 5'-nucleotidase II (cN-II) by ribonucleoside 5'-monophosphate analogues.

  PLoS computational biology 20111201

• Methods, challenges, and promise of next-generation sequencing in cancer biology.

  The Yale journal of biology and medicine 20111201

• [Thymine on silver island films: surface-enhanced Raman scattering and surface-enhanced infrared absorption studies].

  Guang pu xue yu guang pu fen xi = Guang pu 20111201

• Natural product chemistry of gorgonian corals of genus Junceella--part II.

  Marine drugs 20111201

• Opposing role of condensin hinge against replication protein A in mitosis and interphase through promoting DNA annealing.

  Open biology 20111201

• Importance of steric effects on the efficiency and fidelity of transcription by T7 RNA polymerase.

  Biochemistry 20111129

• A simple 'molecular beacon'-based fluorescent sensing strategy for sensitive and selective detection of mercury (II).

  Chemical communications (Cambridge, England) 20111128

• Investigating Mithramycin deoxysugar biosynthesis: enzymatic total synthesis of TDP-D-olivose.

  Chembiochem : a European journal of chemical biology 20111125

• Inactivation of the von Hippel-Lindau tumor suppressor leads to selective expression of a human endogenous retrovirus in kidney cancer.

  Oncogene 20111124

• Low-energy electron-induced damage in a trinucleotide containing 5-bromouracil.

  The journal of physical chemistry. B 20111124

• S0 and S1 state structure, methyl torsional barrier heights, and fast intersystem crossing dynamics of 5-methyl-2-hydroxypyrimidine.

  The journal of physical chemistry. A 20111124

• N-1-(2-mercaptoethyl)thymine modification of gold nanoparticles: a highly selective and sensitive colorimetric chemosensor for Hg2+.

  The Analyst 20111121

• Chemically-modified graphenes for oxidation of DNA bases: analytical parameters.

  The Analyst 20111121

• Theoretical studies on interactions between low energy electrons and protein-DNA fragments: valence anions of AT-amino acids side chain complexes.

  Physical chemistry chemical physics : PCCP 20111121

• Principles of dimer-specific gene regulation revealed by a comprehensive characterization of NF-κB family DNA binding.

  Nature immunology 20111120

• Opposite effects of HIF-1α and HIF-2α on the regulation of IL-8 expression in endothelial cells.

  Free radical biology & medicine 20111115

• Decelerated water dynamics and vibrational couplings of hydrated DNA mapped by two-dimensional infrared spectroscopy.

  The journal of physical chemistry. B 20111110

• Fluorescence light-up recognition of DNA nucleotide based on selective abasic site binding of an excited-state intramolecular proton transfer probe.

  The Analyst 20111107

• HIV-1 restriction factor SAMHD1 is a deoxynucleoside triphosphate triphosphohydrolase.

  Nature 20111106

• Desorption dynamics, internal energies, and imaging of organic molecules from surfaces with laser desorption and vacuum ultraviolet (VUV) photoionization.

  Chemistry, an Asian journal 20111104

• Analysis of the association of IL1B(C-511T) polymorphism with dental implant loss and the clusterization phenomenon.

  Clinical oral implants research 20111101

• Adsorption mechanism of single guanine and thymine on single-walled carbon nanotubes.

  Journal of molecular modeling 20111101

• Seasonal variation in TP53 R249S-mutated serum DNA with aflatoxin exposure and hepatitis B virus infection.

  Environmental health perspectives 20111101

• Pyrimidine degradation influences germination seedling growth and production of Arabidopsis seeds.

  Journal of experimental botany 20111101

• TILLING: a shortcut in functional genomics.

  Journal of applied genetics 20111101

• Branched-chain C-cyano pyranonucleosides: synthesis of 3'-C-cyano & 3'-C-cyano-3'-deoxy pyrimidine pyranonucleosides as novel cytotoxic agents.

  European journal of medicinal chemistry 20111101

• Epigenetic regulation of polymerase II transcription initiation in Trypanosoma cruzi: modulation of nucleosome abundance, histone modification, and polymerase occupancy by O-linked thymine DNA glucosylation.

  Eukaryotic cell 20111101

• An NMR strategy for fragment-based ligand screening utilizing a paramagnetic lanthanide probe.

  Journal of biomolecular NMR 20111101

• Stability and mismatch discrimination of locked nucleic acid-DNA duplexes.

  Biochemistry 20111101

• The mitochondrial transcription and packaging factor Tfam imposes a U-turn on mitochondrial DNA.

  Nature structural & molecular biology 20111101

• Molecular structure of the core-modified siRNA duplexes containing diastereomeric pair of [C6'(R)-OH]- versus [C6'(S)-OH]-carba-LNAs suggests a model for RNAi action.

  Nucleosides, nucleotides & nucleic acids 20111101

• Double-Strand Break Repair and Holliday Junction Processing Are Required for Chromosome Processing in Stationary-Phase Escherichia coli Cells.

  G3 (Bethesda, Md.) 20111101

• Assessment of cyclobutane pyrimidine dimers by digital photography in human skin.

  Journal of immunological methods 20111028

• Tandem GA residues on opposite sides of the loop in molecular beacon-like DNA hairpins compact the loop and increase hairpin stability.

  Biochemistry 20111025

• A scalable pipeline for highly effective genetic modification of a malaria parasite.

  Nature methods 20111023

• 4-Aminobenzimidazole-1-methylthymine: a model for investigating Hoogsteen base-pairing between adenine and thymine.

  The journal of physical chemistry. A 20111020

• Functionally significant nicotine acetylcholine receptor subunit α5 promoter haplotypes are associated with susceptibility to lung cancer in Chinese.

  Cancer 20111015

• Method for detection of Hg2+ based on the specific thymine-Hg2+-thymine interaction in the DNA hybridization on the surface of quartz crystal microbalance.

  Colloids and surfaces. B, Biointerfaces 20111015

• A new N-methyl thymine derivative comprising a dihydroxyisobutenyl unit as ligand for thymidine kinase of herpes simplex virus type 1 (HSV-1 TK).

  Bioorganic & medicinal chemistry letters 20111015

• Thymine DNA glycosylase can rapidly excise 5-formylcytosine and 5-carboxylcytosine: potential implications for active demethylation of CpG sites.

  The Journal of biological chemistry 20111014

• An ultrasensitive electrochemical sensor for the mercuric ion via controlled assembly of SWCNTs.

  Chemical communications (Cambridge, England) 20111014

• Self-replication of information-bearing nanoscale patterns.

  Nature 20111013

• Identification of complex vertebral malformation carriers in Holstein cattle in south China.

  Genetics and molecular research : GMR 20111013

• Formation of a N2-dG:N2-dG carbinolamine DNA cross-link by the trans-4-hydroxynonenal-derived (6S,8R,11S) 1,N2-dG adduct.

  Journal of the American Chemical Society 20111012

• Asymmetric synthesis of cyclohexene nucleoside analogues.

  The Journal of organic chemistry 20111007

• ATP-induced helicase slippage reveals highly coordinated subunits.

  Nature 20111006

• Direct measurement of the dynamics of excess electron transfer through consecutive thymine sequence in DNA.

  Journal of the American Chemical Society 20111005

• Design, synthesis, and polymerase-catalyzed incorporation of click-modified boronic acid-TTP analogues.

  Chemistry, an Asian journal 20111004

• Selective inhibition of Human Immunodeficiency Virus type 1 (HIV-1) by a novel family of tricyclic nucleosides.

  Antiviral research 20111001

• Thiated derivatives of 2',3'-dideoxy-3'-fluorothymidine: synthesis, in vitro anti-HIV-1 activity and interaction with recombinant drug resistant HIV-1 reverse transcriptase forms.

  Antiviral research 20111001

• Rapid evaluation of the binding energies between peptide amide and DNA base.

  Journal of computational chemistry 20111001

• Adsorption of adenine, cytosine, thymine, and uracil on sulfide-modified montmorillonite: FT-IR, Mössbauer and EPR spectroscopy and X-ray diffractometry studies.

  Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life 20111001

• NAT2 slow acetylation haplotypes are associated with the increased risk of betel quid-related oral and pharyngeal squamous cell carcinoma.

  Oral surgery, oral medicine, oral pathology, oral radiology, and endodontics 20111001

• Functional splicing assay of DSPP mutations in hereditary dentin defects.

  Oral diseases 20111001

• Functional variants of IL4 and IL6 genes and risk of tobacco-related oral carcinoma in high-risk Asian Indians.

  Oral diseases 20111001

• Profile-statistical periodicity of DNA coding regions.

  DNA research : an international journal for rapid publication of reports on genes and genomes 20111001

• Metal-free cleavage efficiency toward DNA by a novel PNA analog-bridged macrocyclic polyamine.

  Bioorganic & medicinal chemistry letters 20111001

• Unrepairable DNA double-strand breaks initiate cytotoxicity with HSV-TK/ganciclovir.

  Cancer gene therapy 20111001

• Functional expression of parasite drug targets and their human orthologs in yeast.

  PLoS neglected tropical diseases 20111001

• High-precision, in vitro validation of the sequestration mechanism for generating ultrasensitive dose-response curves in regulatory networks.

  PLoS computational biology 20111001

• Identification of compound heterozygous mutation in a Korean patient with alpha 1-antitrypsin deficiency.

  The Korean journal of laboratory medicine 20111001

• Von Hippel-Lindau (VHL) inactivation in sporadic clear cell renal cancer: associations with germline VHL polymorphisms and etiologic risk factors.

  PLoS genetics 20111001

• Distinct single amino acid replacements in the control of virulence regulator protein differentially impact streptococcal pathogenesis.

  PLoS pathogens 20111001

• Coupling dTTP hydrolysis with DNA unwinding by the DNA helicase of bacteriophage T7.

  The Journal of biological chemistry 20110930

• Molecular characterization and prevalence of cystic echinococcosis in slaughtered water buffaloes in Turkey.

  Veterinary parasitology 20110927

• Keto-fluorothiopyranosyl nucleosides: a convenient synthesis of 2- and 4-keto-3-fluoro-5-thioxylopyranosyl thymine analogs.

  Carbohydrate research 20110927

• Supramolecular nanofibers and hydrogels of nucleopeptides.

  Angewandte Chemie (International ed. in English) 20110926

• Influence of temperature on thymine-to-solvent vibrational energy transfer.

  The Journal of chemical physics 20110921

• Mining endonuclease cleavage determinants in genomic sequence data.

  The Journal of biological chemistry 20110916

• Nucleobase transport by human equilibrative nucleoside transporter 1 (hENT1).

  The Journal of biological chemistry 20110916

• Solvation of nucleobases in 1,3-dialkylimidazolium acetate ionic liquids: NMR spectroscopy insights into the dissolution mechanism.

  The journal of physical chemistry. B 20110915

• Identification and quantification of nucleosides and nucleobases in Geosaurus and Leech by hydrophilic-interaction chromatography.

  Talanta 20110915

• Hybridization in ssDNA films--a multi-technique spectroscopy study.

  Physical chemistry chemical physics : PCCP 20110914

• Electron transfer-induced fragmentation of thymine and uracil in atom-molecule collisions.

  Physical chemistry chemical physics : PCCP 20110914

• A crystallographic study of the role of sequence context in thymine glycol bypass by a replicative DNA polymerase serendipitously sheds light on the exonuclease complex.

  Journal of molecular biology 20110909

• Model calculations for the misincorporation of nucleotides opposite five-membered exocyclic DNA adduct: N(2),3-ethenoguanine.

  The journal of physical chemistry. B 20110908

• Photodimerisation of glycothymidines in solution and in micelles.

  Chemical communications (Cambridge, England) 20110907

• Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA.

  Science (New York, N.Y.) 20110902

• Crystal structure of the mismatch-specific thymine glycosylase domain of human methyl-CpG-binding protein MBD4.

  Biochemical and biophysical research communications 20110902

• Molecular biology. Demystifying DNA demethylation.

  Science (New York, N.Y.) 20110902

• Quantification of thermal ring flexibilities of aromatic and heteroaromatic compounds.

  Journal of molecular modeling 20110901

• Base-calling for next-generation sequencing platforms.

  Briefings in bioinformatics 20110901

• Noncovalent interactions in paired DNA nucleobases investigated by terahertz spectroscopy and solid-state density functional theory.

  The journal of physical chemistry. A 20110901

• Optimization of pyrosequencing reads by superior successive incorporation efficiency of improved 2'-deoxyadenosine-5'-triphosphate analogs.

  Analytical biochemistry 20110901

• Specific photodynamics in thymine clusters: the role of hydrogen bonding.

  The journal of physical chemistry. A 20110901

• Pathways of resistance to thymineless death in Escherichia coli and the function of UvrD.

  Genetics 20110901

• Effect of growth under selection on appearance of chromosomal mutations in Salmonella enterica.

  Genetics 20110901

• Rapid cell division contributes to efficient induction of A/T mutations during Ig gene hypermutation.

  Molecular immunology 20110901

• The dgt gene of Escherichia coli facilitates thymine utilization in thymine-requiring strains.

  Molecular microbiology 20110901

• Structural and functional studies on the interaction of GspC and GspD in the type II secretion system.

  PLoS pathogens 20110901

• N-Cyclo-propyl-N-[2-(2,4-difluoro-phen-yl)-2-hy-droxy-1-(1H-1,2,4-triazol-1-yl)prop-yl]-2-(5-methyl-2,4-dioxo-1,2,3,4-tetra-hydro-pyrimidin-1-yl)acetamide dichloro-methane 0.62-solvate.

  Acta crystallographica. Section E, Structure reports online 20110901

• Association of MMP-8 polymorphisms with tendinopathy of the primary posterior tibial tendon: a pilot study.

  Clinics (Sao Paulo, Brazil) 20110901

• The role of methylenetetrahydrofolate reductase C677T polymorphism on the peripheral blood natural killer cell proportion in women with unexplained recurrent miscarriages.

  Clinical and experimental reproductive medicine 20110901

• Theoretical studies of the base pair fidelity of selenium-modified DNA.

  The journal of physical chemistry. B 20110825

• Chemical synthesis, crystal structure and enzymatic evaluation of a dinucleotide spore photoproduct analogue containing a formacetal linker.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20110822

• Janus-type AT nucleosides: synthesis, solid and solution state structures.

  Organic & biomolecular chemistry 20110821

• Recognition of thymine in DNA bulges by a Zn(II) macrocyclic complex.

  Chemical communications (Cambridge, England) 20110814

• A theoretical rationale for why azetidine has a faster rate of formation than oxetane in TC(6-4) photoproducts.

  The journal of physical chemistry. B 20110811

• Magic-angle spinning NMR of a class I filamentous bacteriophage virus.

  The journal of physical chemistry. B 20110811

• Chemical investigation of light induced DNA bipyrimidine damage and repair.

  Chemical Society reviews 20110801

• Modeling the impact of mitochondrial DNA damage in forebrain neurons and beyond.

  Mechanisms of ageing and development 20110801

• Loop residues of thrombin-binding DNA aptamer impact G-quadruplex stability and thrombin binding.

  Biochimie 20110801

• Molecular mechanisms underlying chemopreventive activities of glycyrrhizic acid against UVB-radiation-induced carcinogenesis in SKH-1 hairless mouse epidermis.

  Radiation research 20110801

• Mechanism and dynamics of intramolecular triplet state decay of 1-propyl-4-thiouracil and its α-methyl-substituted derivatives studied in perfluoro-1,3-dimethylcyclohexane.

  Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 20110801

• Palindromic-nucleotide substitutions (PNS) of hepatitis C virus genotypes 1 and 5a from South Africa.

  Journal of virological methods 20110801

• A quantitative measure of chirality inside nucleic acid databank.

  Chirality 20110801

• Screening nucleotide binding to amino acid-coated supports by surface plasmon resonance and nuclear magnetic resonance.

  Analytical and bioanalytical chemistry 20110801

• Mutagenicity associated with O6-methylguanine-DNA damage and mechanism of nucleotide flipping by AGT during repair.

  Physical biology 20110801

• SH3BP2-encoding exons involved in cherubism are not associated with central giant cell granuloma.

  International journal of oral and maxillofacial surgery 20110801

• Interaction of minor groove ligands with G-quadruplexes: thermodynamic contributions of the number of quartets, T-U substitutions, and conformation.

  Biochimie 20110801

• Intramolecular CH···O hydrogen bonds in the AI and BI DNA-like conformers of canonical nucleosides and their Watson-Crick pairs. Quantum chemical and AIM analysis.

  Journal of biomolecular structure & dynamics 20110801

• Molecular recognition patterns of 2-aminopurine versus adenine: a view through ternary copper(II) complexes.

  Journal of inorganic biochemistry 20110801

• Two novel mutations in the gene EDAR causing autosomal recessive hypohidrotic ectodermal dysplasia.

  Orthodontics & craniofacial research 20110801

• Chemical constituents from the roots of Xanthium sibiricum.

  Natural product research 20110801

• Epigenetic regulation of mucin genes in human cancers.

  Clinical epigenetics 20110801

• Generation of guanine-thymidine cross-links in DNA by peroxynitrite/carbon dioxide.

  Chemical research in toxicology 20110718

• 1,N2-Etheno-2'-deoxyguanosine adopts the syn conformation about the glycosyl bond when mismatched with deoxyadenosine.

  Chemical research in toxicology 20110718

• Tissue-specific distribution and dynamic changes of 5-hydroxymethylcytosine in mammalian genomes.

  The Journal of biological chemistry 20110715

• Visual detection of Hg²⁺ in aqueous solution using gold nanoparticles and thymine-rich hairpin DNA probes.

  Biosensors & bioelectronics 20110715

• Simultaneous detection and removal of mercury ions in aqueous solution with fluorescent conjugated polymer-based sensor ensemble.

  Macromolecular rapid communications 20110715

• Suppression of TLR9 immunostimulatory motifs in the genome of a gammaherpesvirus.

  Journal of immunology (Baltimore, Md. : 1950) 20110715

• Adsorption of DNA/RNA nucleobases on hexagonal boron nitride sheet: an ab initio study.

  Physical chemistry chemical physics : PCCP 20110714

• Probing the reaction mechanism of spore photoproduct lyase (SPL) via diastereoselectively labeled dinucleotide SP TpT substrates.

  Journal of the American Chemical Society 20110713

• On the nature of the long-lived 'dark' state of isolated 1-methylthymine.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20110711

• The interplay between ππ*/nπ* excited states in gas-phase thymine: a quantum dynamical study.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20110711

• Femtosecond decay dynamics of intact adenine and thymine base pairs in a supersonic jet.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20110711

• Thymine DNA glycosylase is essential for active DNA demethylation by linked deamination-base excision repair.

  Cell 20110708

• Hydrogen-bonding capability of a templating difluorotoluene nucleotide residue in an RB69 DNA polymerase ternary complex.

  Journal of the American Chemical Society 20110706

• Affinity clusters: an adenine-coated gold cluster binds to thymine loops in DNA.

  Chemistry, an Asian journal 20110704

• Triostin A derived hybrid for simultaneous DNA binding and metal coordination.

  Amino acids 20110701

• PAX6 polymorphisms in 20 Chinese children with supernumerary teeth in the maxillary incisor area.

  International journal of paediatric dentistry 20110701

• Leveraging structure determination with fragment screening for infectious disease drug targets: MECP synthase from Burkholderia pseudomallei.

  Journal of structural and functional genomics 20110701

• Targeted deletion of GSNOR in hepatocytes of mice causes nitrosative inactivation of O6-alkylguanine-DNA alkyltransferase and increased sensitivity to genotoxic diethylnitrosamine.

  Carcinogenesis 20110701

• Mode of action of trifluorothymidine (TFT) against DNA replication and repair enzymes.

  International journal of oncology 20110701

• The glutamate switch of bacteriophage T7 DNA helicase: role in coupling nucleotide triphosphate (NTP) and DNA binding to NTP hydrolysis.

  The Journal of biological chemistry 20110701

• A new route to dTDP-6-deoxy-l-talose and dTDP-L-rhamnose: dTDP-L-rhamnose 4-epimerase in Burkholderia thailandensis.

  Bioorganic & medicinal chemistry letters 20110701

• Molecular layer-by-layer self-assembly and mercury sensing characteristics of novel brush polymers bearing thymine moieties.

  ACS applied materials & interfaces 20110701

• Synthesis of enantiomerically pure D- and L-bicyclo[3.1.0]hexenyl carbanucleosides and their antiviral evaluation.

  Bioorganic & medicinal chemistry 20110701

• Stacking interactions in denaturation of DNA fragments.

  The European physical journal. E, Soft matter 20110701

• In silico evidence for gluconeogenesis from fatty acids in humans.

  PLoS computational biology 20110701

• An epigenetic switch involving overlapping fur and DNA methylation optimizes expression of a type VI secretion gene cluster.

  PLoS genetics 20110701

• Dimethyl hydrazine-1,2-dicarboxyl-ate-triphenyl-phosphine oxide (1/1).

  Acta crystallographica. Section E, Structure reports online 20110701

• Alcohol consumption and oxidative DNA damage.

  International journal of environmental research and public health 20110701

• Activity of psoralen-functionalized nanoscintillators against cancer cells upon X-ray excitation.

  ACS nano 20110628

• On the role of London dispersion forces in biomolecular structure determination.

  The journal of physical chemistry. B 20110623

• EPR detection of an electron scavenging contaminant in irradiated deoxyoligonucleotides: one-electron reduced benzoyl.

  The journal of physical chemistry. B 20110623

• A novel clustering method via nucleotide-based Fourier power spectrum analysis.

  Journal of theoretical biology 20110621

• The solvation, partitioning, hydrogen bonding, and dimerization of nucleotide bases: a multifaceted challenge for quantum chemistry.

  Physical chemistry chemical physics : PCCP 20110621

• Effect of solvation on the vertical ionization energy of thymine: from microhydration to bulk.

  The journal of physical chemistry. A 20110616

• Coordination of DNA-PK activation and nuclease processing of DNA termini in NHEJ.

  Antioxidants & redox signaling 20110615

• A257T linker region mutant of T7 helicase-primase protein is defective in DNA loading and rescued by T7 DNA polymerase.

  The Journal of biological chemistry 20110610

• Excess electron localization in solvated DNA bases.

  Physical review letters 20110610

• Metal-induced aggregation of mononucleotides-stabilized gold nanoparticles: an efficient approach for simple and rapid colorimetric detection of Hg(II).

  Chemical communications (Cambridge, England) 20110607

• A simple and label-free sensor for mercury(II) detection in aqueous solution by malachite green based on a resonance scattering spectral assay.

  Chemical communications (Cambridge, England) 20110607

• Delayed repair of radiation induced clustered DNA damage: friend or foe?

  Mutation research 20110603

• [2+2] Photocycloaddition reaction dynamics of triplet pyrimidines.

  The journal of physical chemistry. A 20110602

• Functional analysis of the conserved hydrophobic gate region of the magnesium transporter CorA.

  Biochimica et biophysica acta 20110601

• A mild phenotype of dihydropyrimidine dehydrogenase deficiency and developmental retardation associated with a missense mutation affecting cofactor binding.

  Clinical biochemistry 20110601

• Synthesis and anti-HIV-1 activity of new fluoro-HEPT analogues: an investigation on fluoro versus hydroxy substituents.

  Archiv der Pharmazie 20110601

• Diallyl sulfide protects against ultraviolet B-induced skin cancers in SKH-1 hairless mouse: analysis of early molecular events in carcinogenesis.

  Photodermatology, photoimmunology & photomedicine 20110601

• Novel mutation in the homeobox domain of transcription factor POU3F4 associated with profound sensorineural hearing loss.

  Otology & neurotology : official publication of the American Otological Society, American Neurotology Society [and] European Academy of Otology and Neurotology 20110601

• Impact of DNA-surface interactions on the stability of DNA hybrids.

  Analytical chemistry 20110601

• Thymine quintets and their higher order assemblies studied by electrospray ionization mass spectrometry and theoretical calculation.

  Journal of mass spectrometry : JMS 20110601

• Phylogenetics of the phlebotomine sand fly group Verrucarum (Diptera: Psychodidae: Lutzomyia).

  The American journal of tropical medicine and hygiene 20110601

• Effects of intronic and exonic polymorphisms of paraoxonase 1 (PON1) gene on serum PON1 activity in a Korean population.

  Journal of Korean medical science 20110601

• Unexpected role for Helicobacter pylori DNA polymerase I as a source of genetic variability.

  PLoS genetics 20110601

• Insights into Alzheimer disease pathogenesis from studies in transgenic animal models.

  Clinics (Sao Paulo, Brazil) 20110601

• Electrocatalytic oxidation of nucleobases by TiO2 nanobelts.

  Physical chemistry chemical physics : PCCP 20110528

• An ab initio study of ion induced charge transfer dynamics in collision of carbon ions with thymine.

  Physical chemistry chemical physics : PCCP 20110528

• DNA methylation and demethylation in mammals.

  The Journal of biological chemistry 20110527

• Contiguous metal-mediated base pairs comprising two Ag(I) ions.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20110527

• Phage T4-induced dTTP accretion bolsters a tRNase-based host defense.

  Virology 20110525

• Colorimetric assay for mercury (II) based on mercury-specific deoxyribonucleic acid-functionalized gold nanoparticles.

  Analytica chimica acta 20110523

• A triplet mechanism for the formation of thymine-thymine (6-4) dimers in UV-irradiated DNA.

  Physical chemistry chemical physics : PCCP 20110521

• Localization of a hole on an adenine-thymine radical cation in B-form DNA in water.

  The journal of physical chemistry. B 20110519

• Observation of water molecules within the bimolecular d(G₃CT₄G₃C)₂G-quadruplex.

  Biochemistry 20110517

• Uracil-DNA glycosylase in base excision repair and adaptive immunity: species differences between man and mouse.

  The Journal of biological chemistry 20110513

• Correlations of six related pyrimidine metabolites and diabetic retinopathy in Chinese type 2 diabetic patients.

  Clinica chimica acta; international journal of clinical chemistry 20110512

• Vasopressor nerve responses in the pithed rat, previously identified as α2-adrenoceptor mediated, may be α1D-adrenoceptor mediated.

  European journal of pharmacology 20110511

• Adsorption of thymine and uracil on 1:1 clay mineral surfaces: comprehensive ab initio study on influence of sodium cation and water.

  Physical chemistry chemical physics : PCCP 20110507

• Anhydrous crystals of DNA bases are wide gap semiconductors.

  The Journal of chemical physics 20110507

• Dependence of substrate binding and catalysis on pH, ionic strength, and temperature for thymine DNA glycosylase: Insights into recognition and processing of G·T mispairs.

  DNA repair 20110505

• Pathways for fluorescence quenching in 2-aminopurine π-stacked with pyrimidine nucleobases.

  Journal of the American Chemical Society 20110504

• Electronic and molecular structure of M-DNA fragments.

  Journal of molecular modeling 20110501

• Structure-based in-silico rational design of a selective peptide inhibitor for thymidine monophosphate kinase of mycobacterium tuberculosis.

  Journal of molecular modeling 20110501

• Association between AMELX polymorphisms and dental caries in Koreans.

  Oral diseases 20110501

• The role of AlkB protein in repair of 1,N⁶-ethenoadenine in Escherichia coli cells.

  Mutagenesis 20110501

• Molecular recognition of the antiretroviral drug abacavir: towards the development of a novel carbazole-based fluorosensor.

  Journal of fluorescence 20110501

• A case of secondary malignant giant-cell tumor of bone with p53 mutation after long-term follow-up.

  Human pathology 20110501

• TGF-β1 gene polymorphism in renal transplant patients with and without gingival overgrowth.

  Oral diseases 20110501

• Synthesis, biological evaluation and supramolecular assembly of novel analogues of peptidyl nucleosides.

  Molecular bioSystems 20110501

• Survival and CTG repeat expansion in adults with myotonic dystrophy type 1.

  Muscle & nerve 20110501

• Prevalence of endothelial nitric oxide synthase (eNOS) gene exon 7 Glu298Asp variant in North Eastern India.

  The Indian journal of medical research 20110501

• The stb operon balances the requirements for vegetative stability and conjugative transfer of plasmid R388.

  PLoS genetics 20110501

• Interleukin-1β, calcium-sensing receptor, and urokinase gene polymorphisms in korean patients with urolithiasis.

  Korean journal of urology 20110501

• [Simultanenous determination of contents of four nitrogenous compounds in Pinellia peda-tisecta by HPLC].

  Zhongguo Zhong yao za zhi = Zhongguo zhongyao zazhi = China journal of Chinese materia medica 20110501

• Role of human DNA polymerase κ in extension opposite from a cis-syn thymine dimer.

  Journal of molecular biology 20110429

• Label-free fluorescent sensor for mercury(II) ion by using carbon nanotubes to reduce background signal.

  The Analyst 20110421

• Naked eye sensing of melamine using rationally tailored gold nanoparticles: hydrogen-bonding and charge-transfer recognition.

  The Analyst 20110421

• Time-dependent approaches for the calculation of intersystem crossing rates.

  The Journal of chemical physics 20110421

• Monovalent cation size and DNA conformational stability.

  Biochemistry 20110419

• Rapid evaluation of the binding energies in hydrogen-bonded amide-thymine and amide-uracil dimers in gas phase.

  Journal of computational chemistry 20110415

• Structural basis for the inhibition of human alkyladenine DNA glycosylase (AAG) by 3,N4-ethenocytosine-containing DNA.

  The Journal of biological chemistry 20110415

• Quantum mechanics study and Monte Carlo simulation on the hydrolytic deamination of 5-methylcytosine glycol.

  Physical chemistry chemical physics : PCCP 20110414

• Synthesis and spectroscopic studies of the aminoglycoside (neomycin)--perylene conjugate binding to human telomeric DNA.

  Biochemistry 20110412

• Binding of cationic conjugated polymers to DNA: atomistic simulations of adducts involving the Dickerson's dodecamer.

  Biomacromolecules 20110411

• Calibration and applications of the ΔMP2 method for calculating core electron binding energies.

  Physical chemistry chemical physics : PCCP 20110407

• Shape resonance states of the low-energy electron attachments to DNA base tautomers.

  Physical chemistry chemical physics : PCCP 20110407

• Genetic variation in cholinergic muscarinic-2 receptor gene modulates M2 receptor binding in vivo and accounts for reduced binding in bipolar disorder.

  Molecular psychiatry 20110401

• Covalent hybridization of CNT by thymine and uracil: a computational study.

  Journal of molecular modeling 20110401

• Identification of the DSPP mutation in a new kindred and phenotype-genotype correlation.

  Oral diseases 20110401

• Single nucleotide polymorphisms of pattern recognition receptors and chronic periodontitis.

  Journal of periodontal research 20110401

• Evidences for supramolecular organization of nucleopeptides: synthesis, spectroscopic and biological studies of a novel dithymine L-serine tetrapeptide.

  Molecular bioSystems 20110401

• In vitro functional effects of XPC gene rare variants from bladder cancer patients.

  Carcinogenesis 20110401

• Radiation metabolomics. 4. UPLC-ESI-QTOFMS-Based metabolomics for urinary biomarker discovery in gamma-irradiated rats.

  Radiation research 20110401

• Synthesis and biological evaluation of unsaturated keto and exomethylene D-arabinopyranonucleoside analogs: novel 5-fluorouracil analogs that target thymidylate synthase.

  European journal of medicinal chemistry 20110401

• Sensing mispaired thymines in DNA heteroduplexes using an electroactive osmium marker: towards electrochemical SNP probing.

  Analytical and bioanalytical chemistry 20110401

• Mechanisms of high-order photobleaching and its relationship to intracellular ablation.

  Biomedical optics express 20110401

• Deep UV resonant Raman spectroscopy for photodamage characterization in cells.

  Biomedical optics express 20110401

• β-amylase-like proteins function as transcription factors in Arabidopsis, controlling shoot growth and development.

  The Plant cell 20110401

• Chromatin organization in sperm may be the major functional consequence of base composition variation in the human genome.

  PLoS genetics 20110401

• Reversing the aging stromal phenotype prevents carcinoma initiation.

  Aging 20110401

• Genome analysis reveals interplay between 5'UTR introns and nuclear mRNA export for secretory and mitochondrial genes.

  PLoS genetics 20110401

• Relationship between Metabolic Syndrome and MTHFR Polymorphism in Colorectal Cancer.

  Journal of the Korean Society of Coloproctology 20110401

• Synthesis, crystal structure, and in vitro biological evaluation of C-6 pyrimidine derivatives: new lead structures for monitoring gene expression in vivo.

  Nucleosides, nucleotides & nucleic acids 20110401

• On the organizational dynamics of the genetic code.

  Genomics, proteomics & bioinformatics 20110401

• Genetic requirement for mutagenesis of the G[8,5-Me]T cross-link in Escherichia coli: DNA polymerases IV and V compete for error-prone bypass.

  Biochemistry 20110329

• Thymidine phosphorylase in cancer cells stimulates human endothelial cell migration and invasion by the secretion of angiogenic factors.

  British journal of cancer 20110329

• Characterization of the TDP-D-ravidosamine biosynthetic pathway: one-pot enzymatic synthesis of TDP-D-ravidosamine from thymidine-5-phosphate and glucose-1-phosphate.

  Organic & biomolecular chemistry 20110321

• Simultaneous detection of guanine, adenine, thymine and cytosine at choline monolayer supported multiwalled carbon nanotubes film.

  Biosensors & bioelectronics 20110315

• Shmt1 heterozygosity impairs folate-dependent thymidylate synthesis capacity and modifies risk of Apc(min)-mediated intestinal cancer risk.

  Cancer research 20110315

• A novel cationic triazatetrabenzcorrole: selective detection of mercury(II) by nucleic acid-induced aggregation.

  The Analyst 20110307

• The synthesis of double-headed nucleosides by the CuAAC reaction and their effect in secondary nucleic acid structures.

  Organic & biomolecular chemistry 20110307

• Single strand break in DNA coupled to the O-P bond cleavage. A computational study.

  The journal of physical chemistry. B 20110303

• Specific and nonspecific metal ion-nucleotide interactions at aqueous/solid interfaces functionalized with adenine, thymine, guanine, and cytosine oligomers.

  Journal of the American Chemical Society 20110302

• Antitumor activity of bent metallocenes: electronic structure analysis using DFT computations.

  Journal of molecular modeling 20110301

• Platelet receptor polymorphisms do not influence Staphylococcus aureus-platelet interactions or infective endocarditis.

  Microbes and infection 20110301

• Nucleic acid-based fluorescent probes and their analytical potential.

  Analytical and bioanalytical chemistry 20110301

• Emergence of fluoroquinolone-resistant Streptococcus pyogenes in Japan by a point mutation leading to a new amino acid substitution.

  The Journal of antimicrobial chemotherapy 20110301

• BsmI, TaqI, ApaI, and FokI polymorphisms in the vitamin D receptor gene and periodontitis: a meta-analysis of 15 studies including 1338 cases and 1302 controls.

  Journal of clinical periodontology 20110301

• Transition state analysis of the arsenolytic depyrimidination of thymidine by human thymidine phosphorylase.

  Biochemistry 20110301

• Hereditary spherocytosis coexisting with UDP-glucuronosyltransferase deficiency highly suggestive of Crigler-Najjar syndrome type II.

  Yonsei medical journal 20110301

• Electrostatically directed visual fluorescence response of DNA-functionalized monolithic hydrogels for highly sensitive Hg²+ detection.

  ACS applied materials & interfaces 20110301

• Limited dCTP availability accounts for mitochondrial DNA depletion in mitochondrial neurogastrointestinal encephalomyopathy (MNGIE).

  PLoS genetics 20110301

• [Separation of bases, phenols and pharmaceuticals on ionic liquid-modified silica stationary phase with pure water as mobile phase].

  Se pu = Chinese journal of chromatography 20110301

• Rapid naked-eye detection of mercury ions based on non-crosslinking aggregation of double-stranded DNA-carrying gold nanoparticles.

  Chemical communications (Cambridge, England) 20110221

• Embryonic lethal phenotype reveals a function of TDG in maintaining epigenetic stability.

  Nature 20110217

• Inhibitor binding increases the mechanical stability of staphylococcal nuclease.

  Biophysical journal 20110216

• Supramolecular functionalization of electron-beam generated nanostructures.

  Langmuir : the ACS journal of surfaces and colloids 20110215

• Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations.

  Nature communications 20110215

• Femtosecond two-dimensional infrared spectroscopy of adenine-thymine base pairs in DNA oligomers.

  The journal of physical chemistry. B 20110210

• Molecular architecture of TylM1 from Streptomyces fradiae: an N,N-dimethyltransferase involved in the production of dTDP-D-mycaminose.

  Biochemistry 20110208

• Dynamics of uracil and 5-fluorouracil in DNA.

  Biochemistry 20110208

• Effect of the thymidylate synthase inhibitors on dUTP and TTP pool levels and the activities of DNA repair glycosylases on uracil and 5-fluorouracil in DNA.

  Biochemistry 20110208

• Heterogeneous nuclear ribonucleoprotein H1/H2-dependent unsplicing of thymidine phosphorylase results in anticancer drug resistance.

  The Journal of biological chemistry 20110204

• Apoptosis-associated speck-like protein (ASC) controls Legionella pneumophila infection in human monocytes.

  The Journal of biological chemistry 20110204

• MGMT promoter hypermethylation is a frequent, early, and consistent event in astrocytoma progression, and not correlated with TP53 mutation.

  Journal of neuro-oncology 20110201

• 'Protoisochores' in certain archaeal species are formed by replication-associated mutational pressure.

  Biochimie 20110201

• Acycloguanosyl 5'-thymidyltriphosphate, a thymidine analogue prodrug activated by telomerase, reduces pancreatic tumor growth in mice.

  Gastroenterology 20110201

• Efficient synthesis of exomethylene- and keto-exomethylene-d-glucopyranosyl nucleoside analogs as potential cytotoxic agents.

  Carbohydrate research 20110201

• Yet another nucleoside analog for pancreatic cancer.

  Gastroenterology 20110201

• DNA damage induced by low-energy electrons: conversion of thymine to 5,6-dihydrothymine in the oligonucleotide trimer TpTpT.

  Radiation research 20110201

• The expression and function of glucose-dependent insulinotropic polypeptide in the embryonic mouse pancreas.

  Diabetes 20110201

• Direct detection of chicken genomic DNA for gender determination by thymine-DNA glycosylase.

  British poultry science 20110201

• Conformational changes in quadruplex oligonucleotide structures probed by Raman spectroscopy.

  Biomedical optics express 20110201

• Deoxycytidine production by metabolically engineered Corynebacterium ammoniagenes.

  Journal of microbiology (Seoul, Korea) 20110201

• DNA damage and reactive nitrogen species are barriers to Vibrio cholerae colonization of the infant mouse intestine.

  PLoS pathogens 20110201

• Rapid photometric detection of thymine residues partially flipped out of double helix as a method for direct scanning of point mutations and apurinic DNA sites.

  Biochemistry. Biokhimiia 20110201

• Genetics of warfarin sensitivity in an emergency department population with thromboembolic.

  The western journal of emergency medicine 20110201

• Mercury(II)-mediated formation of imide-Hg-imide complexes.

  Dalton transactions (Cambridge, England : 2003) 20110128

• Development of CHARMM polarizable force field for nucleic acid bases based on the classical Drude oscillator model.

  The journal of physical chemistry. B 20110127

• Molecular dynamics of potential rRNA binders: single-stranded nucleic acids and some analogues.

  The journal of physical chemistry. B 20110127

• Lesion bypass activity of DNA polymerase θ (POLQ) is an intrinsic property of the pol domain and depends on unique sequence inserts.

  Journal of molecular biology 20110121

• Pyrimidine-pyrimidine base pairs stabilized by silver(I) ions.

  Chemical communications (Cambridge, England) 20110121

• Nucleobase-mediated stereospecific radical polymerization and combination with RAFT polymerization for simultaneous control of molecular weight and tacticity.

  Macromolecular rapid communications 20110117

• Ultrasensitive and selective detection of mercury(II) in aqueous solution by polymerase assisted fluorescence amplification.

  Biosensors & bioelectronics 20110115

• Zinc(II)-cyclen polyacrylamide gel electrophoresis for detection of mutations in short Ade/Thy-rich DNA fragments.

  Analytical biochemistry 20110115

• Label free sub-picomole level DNA detection with Ag nanoparticle decorated Au nanotip arrays as surface enhanced Raman spectroscopy platform.

  Biosensors & bioelectronics 20110115

• Defining a process operating window for the synthesis of 5-methyluridine by transglycosylation of guanosine and thymine.

  Journal of biotechnology 20110110

• Photoelectron spectroscopic studies of 5-halouracil anions.

  The Journal of chemical physics 20110107

• DNA replication initiation as a key element in thymineless death.

  DNA repair 20110102

• Novel X-linked glomerulopathy is associated with a COL4A5 missense mutation in a non-collagenous interruption.

  Kidney international 20110101

• Association of Wnt3A gene variants with non-syndromic cleft lip with or without cleft palate in Chinese population.

  Archives of oral biology 20110101

• Association of IL1 gene polymorphisms with chronic periodontitis in Brazilians.

  Archives of oral biology 20110101

• A new hypo/oligodontia syndrome: Carvajal/Naxos syndrome secondary to desmoplakin-dominant mutations.

  Journal of dental research 20110101

• Interaction between the MTHFR C677T polymorphism and alcohol--impact on oral cancer risk and multiple DNA methylation of tumor-related genes.

  Journal of dental research 20110101

• Impact of etanercept treatment on ultraviolet B-induced inflammation, cell cycle regulation and DNA damage.

  The British journal of dermatology 20110101

• Identification of dual false indirect exclusions on the D5S818 and FGA loci.

  Legal medicine (Tokyo, Japan) 20110101

• Genome-wide expression profile of first trimester villous and extravillous human trophoblast cells.

  Placenta 20110101

• Readthrough of nonsense mutations in Rett syndrome: evaluation of novel aminoglycosides and generation of a new mouse model.

  Journal of molecular medicine (Berlin, Germany) 20110101

• Geometric properties of nucleic acids with potential for autobuilding.

  Acta crystallographica. Section A, Foundations of crystallography 20110101

• Bacterial artificial chromosome mutagenesis using recombineering.

  Journal of biomedicine & biotechnology 20110101

• The tendency to recreate ancestral CG dinucleotides in the human genome.

  BMC evolutionary biology 20110101

• Detection of viral hemorrhagic septicemia virus (VHSV) from Diporeia spp. (Pontoporeiidae, Amphipoda) in the Laurentian Great Lakes, USA.

  Parasites & vectors 20110101

• Strand-specific PCR of UV radiation-damaged genomic DNA revealed an essential role of DNA-PKcs in the transcription-coupled repair.

  BMC biochemistry 20110101

• The first case of X-linked Alpha-thalassemia/mental retardation (ATR-X) syndrome in Korea.

  Journal of Korean medical science 20110101

• Systematic cross-validation of 454 sequencing and pyrosequencing for the exact quantification of DNA methylation patterns with single CpG resolution.

  BMC biotechnology 20110101

• Towards delineating functions within the fasciola secreted cathepsin l protease family by integrating in vivo based sub-proteomics and phylogenetics.

  PLoS neglected tropical diseases 20110101

• Comprehensive analysis of MGMT promoter methylation: correlation with MGMT expression and clinical response in GBM.

  PloS one 20110101

• Skin lesions in the upper lip/nasal region.

  Eplasty 20110101

• Removal of PCR error products and unincorporated primers by metal-chelate affinity chromatography.

  PloS one 20110101

• Identification of critical residues of the mycobacterial dephosphocoenzyme a kinase by site-directed mutagenesis.

  PloS one 20110101

• Bilateral adrenocortical carcinoma in a patient with multiple endocrine neoplasia type 1 (MEN1) and a novel mutation in the MEN1 gene.

  World journal of surgical oncology 20110101

• Relationship between amino acid composition and gene expression in the mouse genome.

  BMC research notes 20110101

• Identification of potential target genes for the tomato fruit-ripening regulator RIN by chromatin immunoprecipitation.

  BMC plant biology 20110101

• Functional significance of vitamin D receptor FokI polymorphism in human breast cancer cells.

  PloS one 20110101

• Standing genetic variation in contingency loci drives the rapid adaptation of Campylobacter jejuni to a novel host.

  PloS one 20110101

• Effects of non-thermal plasma on mammalian cells.

  PloS one 20110101

• Novel quantitative real-time LCR for the sensitive detection of SNP frequencies in pooled DNA: method development, evaluation and application.

  PloS one 20110101

• SUMO-1 regulates the conformational dynamics of thymine-DNA Glycosylase regulatory domain and competes with its DNA binding activity.

  BMC biochemistry 20110101

• The terminal region of the E. coli chromosome localises at the periphery of the nucleoid.

  BMC microbiology 20110101

• Evidence for somatic gene conversion and deletion in bipolar disorder, Crohn's disease, coronary artery disease, hypertension, rheumatoid arthritis, type-1 diabetes, and type-2 diabetes.

  BMC medicine 20110101

• Myeloperoxidase-derived oxidation: mechanisms of biological damage and its prevention.

  Journal of clinical biochemistry and nutrition 20110101

• Promiscuous prediction and conservancy analysis of CTL binding epitopes of HCV 3a viral proteome from Punjab Pakistan: an in silico approach.

  Virology journal 20110101

• An EST-based analysis identifies new genes and reveals distinctive gene expression features of Coffea arabica and Coffea canephora.

  BMC plant biology 20110101

• The multiple personalities of Watson and Crick strands.

  Biology direct 20110101

• An insertion mutation that distorts antibody binding site architecture enhances function of a human antibody.

  mBio 20110101

• Simple structural differences between coding and noncoding DNA.

  PloS one 20110101

• Inaccurate DNA synthesis in cell extracts of yeast producing active human DNA polymerase iota.

  PloS one 20110101

• ReadDepth: a parallel R package for detecting copy number alterations from short sequencing reads.

  PloS one 20110101

• DNA polymerase β as a novel target for chemotherapeutic intervention of colorectal cancer.

  PloS one 20110101

• Identifying hypermethylated CpG islands using a quantile regression model.

  BMC bioinformatics 20110101

• A heparin binding site Arg79Cys missense mutation in the SERPINC1 gene in a Korean patient with hereditary antithrombin deficiency.

  Annals of clinical and laboratory science 20110101

• Effect of attC structure on cassette excision by integron integrases.

  Mobile DNA 20110101

• iGEMDOCK: a graphical environment of enhancing GEMDOCK using pharmacological interactions and post-screening analysis.

  BMC bioinformatics 20110101

• Newly identified CYP2C93 is a functional enzyme in rhesus monkey, but not in cynomolgus monkey.

  PloS one 20110101

• Mapping and functional characterization of the murine smoothelin-like 1 promoter.

  BMC molecular biology 20110101

• Diet folate, DNA methylation and genetic polymorphisms of MTHFR C677T in association with the prognosis of esophageal squamous cell carcinoma.

  BMC cancer 20110101

• [Preliminary study on molecular mechanism of lotus mutants induced by ion implantation].

  Yi chuan = Hereditas 20110101

• DNABIT Compress - Genome compression algorithm.

  Bioinformation 20110101

• Minimal absent words in prokaryotic and eukaryotic genomes.

  PloS one 20110101

• Uracil DNA N-glycosylase promotes assembly of human centromere protein A.

  PloS one 20110101

• Genome wide SNP discovery, analysis and evaluation in mallard (Anas platyrhynchos).

  BMC genomics 20110101

• Small-molecule diagnostics based on functional DNA nanotechnology: a dipstick test for mercury.

  Faraday discussions 20110101

• One function--multiple mechanisms: the manifold activities of p53 as a transcriptional repressor.

  Journal of biomedicine & biotechnology 20110101

• Mitochondrial acetylation and diseases of aging.

  Journal of aging research 20110101

• Metabolites of purine nucleoside phosphorylase (NP) in serum have the potential to delineate pancreatic adenocarcinoma.

  PloS one 20110101

• The (5-4) and (6-4) adducts of 1-methylthymine and their Dewar valence isomers.

  Photochemistry and photobiology 20110101

• Gone with the currents: lack of genetic differentiation at the circum-continental scale in the Antarctic krill Euphausia superba.

  BMC genetics 20110101

• Rapid identification of allergenic and pathogenic molds in environmental air by an oligonucleotide array.

  BMC infectious diseases 20110101

• Regulated expression of ADAMTS-12 in human trophoblastic cells: a role for ADAMTS-12 in epithelial cell invasion?

  PloS one 20110101

• Investigation of solvent effect and NMR shielding tensors of p53 tumor-suppressor gene in drug design.

  International journal of nanomedicine 20110101

• Rapid identification of Aspergillus fumigatus within the section Fumigati.

  BMC microbiology 20110101

• Replication-fork stalling and processing at a single psoralen interstrand crosslink in Xenopus egg extracts.

  PloS one 20110101

• The AP-1 binding sites located in the pol gene intragenic regulatory region of HIV-1 are important for viral replication.

  PloS one 20110101

• Competing interactions in DNA assembly on graphene.

  PloS one 20110101

• Epistatic roles for Pseudomonas aeruginosa MutS and DinB (DNA Pol IV) in coping with reactive oxygen species-induced DNA damage.

  PloS one 20110101

• High-throughput protein expression using a combination of ligation-independent cloning (LIC) and infrared fluorescent protein (IFP) detection.

  PloS one 20110101

• Effect of reverse transcriptase inhibitors on LINE-1 and Ty1 reverse transcriptase activities and on LINE-1 retrotransposition.

  BMC biochemistry 20110101

• Inactivation of the DNA repair genes mutS, mutL or the anti-recombination gene mutS2 leads to activation of vitamin B1 biosynthesis genes.

  PloS one 20110101

• Mycosporine-like amino acids: relevant secondary metabolites. Chemical and ecological aspects.

  Marine drugs 20110101

• Metabolism, genomics, and DNA repair in the mouse aging liver.

  Current gerontology and geriatrics research 20110101

• Stimulation of growth of the human gastric pathogen Helicobacter pylori by atmospheric level of oxygen under high carbon dioxide tension.

  BMC microbiology 20110101

• Reduction in oxidatively generated DNA damage following smoking cessation.

  Tobacco induced diseases 20110101

• A 115-bp MethyLight assay for detection of p16 (CDKN2A) methylation as a diagnostic biomarker in human tissues.

  BMC medical genetics 20110101

• Complete genome sequence of Mycoplasma suis and insights into its biology and adaption to an erythrocyte niche.

  PloS one 20110101

• [Determination of nucleosides in Rhizoma Pinelliae by high performance liquid chromatography].

  Se pu = Chinese journal of chromatography 20110101

• Systematic and evolutionary insights derived from mtDNA COI barcode diversity in the Decapoda (Crustacea: Malacostraca).

  PloS one 20110101

• Antioxidant potential of bitter cumin (Centratherum anthelminticum (L.) Kuntze) seeds in in vitro models.

  BMC complementary and alternative medicine 20110101

• The enigmatic mitochondrial genome of Rhabdopleura compacta (Pterobranchia) reveals insights into selection of an efficient tRNA system and supports monophyly of Ambulacraria.

  BMC evolutionary biology 20110101

• Atypical epigenetic mark in an atypical location: cytosine methylation at asymmetric (CNN) sites within the body of a non-repetitive tomato gene.

  BMC plant biology 20110101

• Empiric treatment of protracted idiopathic purpura fulminans in an infant: a case report and review of the literature.

  Journal of medical case reports 20110101

• A high resolution map of a cyanobacterial transcriptome.

  Genome biology 20110101

• Genotype-phenotype correlations of TGFBI p.Leu509Pro, p.Leu509Arg, p.Val613Gly, and the allelic association of p.Met502Val-p.Arg555Gln mutations.

  Molecular vision 20110101

• Chemical modification of L-glutamine to alpha-amino glutarimide on autoclaving facilitates Agrobacterium infection of host and non-host plants: A new use of a known compound.

  BMC chemical biology 20110101

• The Salmonella enterica PhoP directly activates the horizontally acquired SPI-2 gene sseL and is functionally different from a S. bongori ortholog.

  PloS one 20110101

• Exploiting nucleotide composition to engineer promoters.

  PloS one 20110101

• The 5S rDNA family evolves through concerted and birth-and-death evolution in fish genomes: an example from freshwater stingrays.

  BMC evolutionary biology 20110101

• Allele-specific, age-dependent and BMI-associated DNA methylation of human MCHR1.

  PloS one 20110101

• Superoxide dismutase, catalase, glutathione peroxidase and gluthatione S-transferases M1 and T1 gene polymorphisms in three Brazilian population groups.

  Genetics and molecular biology 20110101

• Effects of common polymorphisms rs11614913 in miR-196a2 and rs2910164 in miR-146a on cancer susceptibility: a meta-analysis.

  PloS one 20110101

• Mucopolysaccharidosis type I: molecular characteristics of two novel alpha-L-iduronidase mutations in Tunisian patients.

  Diagnostic pathology 20110101

• In vivo UVA irradiation of mouse is more efficient in promoting pulmonary melanoma metastasis than in vitro.

  Cancer cell international 20110101

• Nutritional and metabolic status of children with autism vs. neurotypical children, and the association with autism severity.

  Nutrition & metabolism 20110101

• PAX6 gene analysis in irido-fundal coloboma.

  Molecular vision 20110101

• Mutation rates across budding yeast chromosome VI are correlated with replication timing.

  Genome biology and evolution 20110101

• Deoxyuridines from the marine sponge associated actinomycete Streptomyces microflavus.

  Marine drugs 20110101

• Site-specific DNA labeling by Staudinger ligation.

  Methods in molecular biology (Clifton, N.J.) 20110101

• Mitochondrial complex 1 gene analysis in keratoconus.

  Molecular vision 20110101

• Control region variability of haplogroup C1d and the tempo of the peopling of the Americas.

  PloS one 20110101

• Iwr1 protein is important for preinitiation complex formation by all three nuclear RNA polymerases in Saccharomyces cerevisiae.

  PloS one 20110101

• Substitution rate variation at human CpG sites correlates with non-CpG divergence, methylation level and GC content.

  Genome biology 20110101

• Simplivariate models: uncovering the underlying biology in functional genomics data.

  PloS one 20110101

• A nucleotide binding rectification Brownian ratchet model for translocation of Y-family DNA polymerases.

  Theoretical biology & medical modelling 20110101

• Breakpoint characterization of large deletions in EXT1 or EXT2 in 10 multiple osteochondromas families.

  BMC medical genetics 20110101

• Environmental adaptability and stress tolerance of Laribacter hongkongensis: a genome-wide analysis.

  Cell & bioscience 20110101

• Mechanical tuning of molecular machines for nucleotide recognition at the air-water interface.

  Nanoscale research letters 20110101

• Carbon composite micro- and nano-tubes-based electrodes for detection of nucleic acids.

  Nanoscale research letters 20110101

• Asc-dependent and independent mechanisms contribute to restriction of legionella pneumophila infection in murine macrophages.

  Frontiers in microbiology 20110101

• Cutaneous drug hypersensitivity: immunological and genetic perspective.

  Indian journal of dermatology 20110101

• New words in human mutagenesis.

  BMC bioinformatics 20110101

• Alanine racemase mutants of Burkholderia pseudomallei and Burkholderia mallei and use of alanine racemase as a non-antibiotic-based selectable marker.

  PloS one 20110101

• N. elongata produces type IV pili that mediate interspecies gene transfer with N. gonorrhoeae.

  PloS one 20110101

• Silymarin protects epidermal keratinocytes from ultraviolet radiation-induced apoptosis and DNA damage by nucleotide excision repair mechanism.

  PloS one 20110101

• Rapid detection of the H275Y oseltamivir resistance mutation in influenza A/H1N1 2009 by single base pair RT-PCR and high-resolution melting.

  PloS one 20110101

• Rules extraction from neural networks applied to the prediction and recognition of prokaryotic promoters.

  Genetics and molecular biology 20110101

• The response of mycobacterium tuberculosis to reactive oxygen and nitrogen species.

  Frontiers in microbiology 20110101

• Differences in lateral gene transfer in hypersaline versus thermal environments.

  BMC evolutionary biology 20110101

• Loss of DNA mismatch repair imparts a selective advantage in planarian adult stem cells.

  PloS one 20110101

• 2'-O,4'-C-methyleneoxymethylene bridged nucleic acids (2',4'-BNA(COC)).

  Methods in molecular biology (Clifton, N.J.) 20110101

• Enhancement of the click chemistry for the inverse Diels Alder technology by functionalization of amide-based monomers.

  International journal of medical sciences 20110101

• The architecture and complete sequence of mitochondrial genome of an assassin bug Agriosphodrus dohrni (Hemiptera: Reduviidae).

  International journal of biological sciences 20110101

• Comprehensive genomic analysis of a BRCA2 deficient human pancreatic cancer.

  PloS one 20110101

• The human RECQ1 helicase is highly expressed in glioblastoma and plays an important role in tumor cell proliferation.

  Molecular cancer 20110101

• Molecular nevogenesis.

  Dermatology research and practice 20110101

• Allotment of carbon is responsible for disorders in proteins.

  Bioinformation 20110101

• FAAST: Flow-space Assisted Alignment Search Tool.

  BMC bioinformatics 20110101

• Molecular Imaging and Pharmacokinetic Analysis of Carbon-11 Labeled Antisense Oligonucleotide LY2181308 in Cancer Patients.

  Theranostics 20110101

• Effect of Steric Constraint at the γ-Backbone Position on the Conformations and Hybridization Properties of PNAs.

  Journal of nucleic acids 20110101

• Identification of an epigenetic biomarker panel with high sensitivity and specificity for colorectal cancer and adenomas.

  Molecular cancer 20110101

• The complexity of Rhipicephalus (Boophilus) microplus genome characterised through detailed analysis of two BAC clones.

  BMC research notes 20110101

• Metabolomic profiling reveals a role for androgen in activating amino acid metabolism and methylation in prostate cancer cells.

  PloS one 20110101

• CBP/p300 and SIRT1 are involved in transcriptional regulation of S-phase specific histone genes.

  PloS one 20110101

• ZEB1 limits adenoviral infectability by transcriptionally repressing the coxsackie virus and adenovirus receptor.

  Molecular cancer 20110101

• New insights in the removal of the hydantoins, oxidation product of pyrimidines, via the base excision and nucleotide incision repair pathways.

  PloS one 20110101

• A defined terminal region of the E. coli chromosome shows late segregation and high FtsK activity.

  PloS one 20110101

• Strong association of 677 C>T substitution in the MTHFR gene with male infertility--a study on an indian population and a meta-analysis.

  PloS one 20110101

• Expression and rhythmic modulation of circulating microRNAs targeting the clock gene Bmal1 in mice.

  PloS one 20110101

• Evolutionary variation of papillomavirus E2 protein and E2 binding sites.

  Virology journal 20110101

• A codon substitution model that incorporates the effect of the GC contents, the gene density and the density of CpG islands of human chromosomes.

  BMC genomics 20110101

• Use of nucleic Acid analogs for the study of nucleic Acid interactions.

  Journal of nucleic acids 20110101

• Gold nanoparticle-based surface-enhanced Raman scattering for noninvasive molecular probing of embryonic stem cell differentiation.

  PloS one 20110101

• Spatial analyses of mono, di and trinucleotide trends in plant genes.

  PloS one 20110101

• Structural basis for sequence specific DNA binding and protein dimerization of HOXA13.

  PloS one 20110101

• Long term transcriptional reactivation of epigenetically silenced genes in colorectal cancer cells requires DNA hypomethylation and histone acetylation.

  PloS one 20110101

• CpG islands undermethylation in human genomic regions under selective pressure.

  PloS one 20110101

• The global DNA methylation surrogate LINE-1 methylation is correlated with MGMT promoter methylation and is a better prognostic factor for glioma.

  PloS one 20110101

• Molecular basis for chiral selection in RNA aminoacylation.

  International journal of molecular sciences 20110101

• Protein X of hepatitis B virus: origin and structure similarity with the central domain of DNA glycosylase.

  PloS one 20110101

• PARalyzer: definition of RNA binding sites from PAR-CLIP short-read sequence data.

  Genome biology 20110101

• Flanking bases influence the nature of DNA distortion by platinum 1,2-intrastrand (GG) cross-links.

  PloS one 20110101

• Inability of Prevotella bryantii to form a functional Shine-Dalgarno interaction reflects unique evolution of ribosome binding sites in Bacteroidetes.

  PloS one 20110101

• Enzymatic synthesis of long double-stranded DNA labeled with haloderivatives of nucleobases in a precisely pre-determined sequence.

  BMC biochemistry 20110101

• [SOS response of DNA repair and genetic cell instability under hypoxic conditions].

  Radiatsionnaia biologiia, radioecologiia 20110101

• Control of prostate cancer associated with withdrawal of a supplement containing folic acid, L-methyltetrahydrofolate and vitamin B12: a case report.

  Journal of medical case reports 20110101

• EFS shows biallelic methylation in uveal melanoma with poor prognosis as well as tissue-specific methylation.

  BMC cancer 20110101

• The GC-rich mitochondrial and plastid genomes of the green alga Coccomyxa give insight into the evolution of organelle DNA nucleotide landscape.

  PloS one 20110101

• The chemotherapeutic drug 5-fluorouracil promotes PKR-mediated apoptosis in a p53-independent manner in colon and breast cancer cells.

  PloS one 20110101

• Inverse association between methylation of human papillomavirus type 16 DNA and risk of cervical intraepithelial neoplasia grades 2 or 3.

  PloS one 20110101

• A toxin-antitoxin module in Bacillus subtilis can both mitigate and amplify effects of lethal stress.

  PloS one 20110101

• Characterization of a ViI-like phage specific to Escherichia coli O157:H7.

  Virology journal 20110101

• Fragmentation of contaminant and endogenous DNA in ancient samples determined by shotgun sequencing; prospects for human palaeogenomics.

  PloS one 20110101

• Testing the FMR1 promoter for mosaicism in DNA methylation among CpG sites, strands, and cells in FMR1-expressing males with fragile X syndrome.

  PloS one 20110101

• Targeting several CAG expansion diseases by a single antisense oligonucleotide.

  PloS one 20110101

• Evaluation of two models for human topoisomerase I interaction with dsDNA and camptothecin derivatives.

  PloS one 20110101

• Molecular evolution of Adh and LEAFY and the phylogenetic utility of their introns in Pyrus (Rosaceae).

  BMC evolutionary biology 20110101

• Transcription factor binding site positioning in yeast: proximal promoter motifs characterize TATA-less promoters.

  PloS one 20110101

• Environmental levels of the antiviral oseltamivir induce development of resistance mutation H274Y in influenza A/H1N1 virus in mallards.

  PloS one 20110101

• Exome sequencing identifies a missense mutation in Isl1 associated with low penetrance otitis media in dearisch mice.

  Genome biology 20110101

• Severe encephalopathy, lactic acidosis, vegetative instability and neuropathy with 5-Fluorouracil treatment - pyrimidine degradation defect or beriberi?

  Case reports in oncology 20110101

• α(1D)-Adrenoceptor regulates the vasopressor action of α(1A)-adrenoceptor in mesenteric vascular bed of α(1D)-adrenoceptor knockout mice.

  Autonomic & autacoid pharmacology 20110101

• Exploring DNA topoisomerase I ligand space in search of novel anticancer agents.

  PloS one 20110101

• Eukaryotic evolutionary transitions are associated with extreme codon bias in functionally-related proteins.

  PloS one 20110101

• Nuclear reprogramming in mouse primordial germ cells: epigenetic contribution.

  Stem cells international 20110101

• Solvent effects on structural and thermochemical properties of p53 tumor-suppressor gene: a molecular modeling approach in drug design.

  International journal of nanomedicine 20110101

• Monilinia species causing brown rot of peach in China.

  PloS one 20110101

• Adaptation of organisms by resonance of RNA transcription with the cellular redox cycle.

  PloS one 20110101

• Chemoresistance of glioblastoma cancer stem cells--much more complex than expected.

  Molecular cancer 20110101

• Correlating CpG islands, motifs, and sequence variants in human chromosome 21.

  BMC genomics 20110101

• Systematic analysis of mitochondrial genes associated with hearing loss in the Japanese population: dHPLC reveals a new candidate mutation.

  BMC medical genetics 20110101

• Identification of cis-regulatory sequence variations in individual genome sequences.

  Genome medicine 20110101

• Nucleotide discrimination with DNA immobilized in the MspA nanopore.

  PloS one 20110101

• A SILAC-based screen for Methyl-CpG binding proteins identifies RBP-J as a DNA methylation and sequence-specific binding protein.

  PloS one 20110101

• Importance of IL-10 modulation by probiotic microorganisms in gastrointestinal inflammatory diseases.

  ISRN gastroenterology 20110101

• Challenges in the association of human single nucleotide polymorphism mentions with unique database identifiers.

  BMC bioinformatics 20110101

• Cerebellum-specific and age-dependent expression of an endogenous retrovirus with intact coding potential.

  Retrovirology 20110101

• Lactococci and lactobacilli as mucosal delivery vectors for therapeutic proteins and DNA vaccines.

  Microbial cell factories 20110101

• A comparative study of the role of cytokine polymorphisms interleukin-10 and tumor necrosis factor alpha in susceptibility to implant failure and chronic periodontitis.

  The International journal of oral & maxillofacial implants 20110101

• Mitochondrial genome sequence analysis: a custom bioinformatics pipeline substantially improves Affymetrix MitoChip v2.0 call rate and accuracy.

  BMC bioinformatics 20110101

• Abundance of ultramicro inversions within local alignments between human and chimpanzee genomes.

  BMC evolutionary biology 20110101

• CYP1A1 MspI and exon7 gene polymorphisms and lung cancer risk: an updated meta-analysis and review.

  Journal of experimental & clinical cancer research : CR 20110101

• CpG deamination creates transcription factor-binding sites with high efficiency.

  Genome biology and evolution 20110101

• Probing structural features and binding mode of 3-arylpyrimidin-2,4-diones within housefly γ-aminobutyric acid (GABA) receptor.

  International journal of molecular sciences 20110101

• Recognition-mediated assembly of quantum dot polymer conjugates with controlled morphology.

  International journal of molecular sciences 20110101

• Integrated proteomic and metabolomic analysis of an artificial microbial community for two-step production of vitamin C.

  PloS one 20110101

• Genetic interactions between MTHFR (C677T), methionine synthase (A2756G, C2758G) variants with vitamin B12 and folic acid determine susceptibility to premature coronary artery disease in Indian population.

  Journal of cardiovascular disease research 20110101

• Development of a PNA probe for fluorescence in situ hybridization detection of Prorocentrum donghaiense.

  PloS one 20110101

• False negative results from using common PCR reagents.

  BMC research notes 20110101

• A proteogenomic analysis of Shigella flexneri using 2D LC-MALDI TOF/TOF.

  BMC genomics 20110101

• A low-cost library construction protocol and data analysis pipeline for Illumina-based strand-specific multiplex RNA-seq.

  PloS one 20110101

• Is mitochondrial tRNA(phe) variant m.593T>C a synergistically pathogenic mutation in Chinese LHON families with m.11778G>A?

  PloS one 20110101

• DNA methylation: bisulphite modification and analysis.

  Journal of visualized experiments : JoVE 20110101

• Significant selective constraint at 4-fold degenerate sites in the avian genome and its consequence for detection of positive selection.

  Genome biology and evolution 20110101

• Acquired antibiotic resistance genes: an overview.

  Frontiers in microbiology 20110101

• Effect of DNA groove binder distamycin A upon chromatin structure.

  PloS one 20110101

• An alignment-free approach for eukaryotic ITS2 annotation and phylogenetic inference.

  PloS one 20110101

• Translesion DNA synthesis in the context of cancer research.

  Cancer cell international 20110101

• A photolyase-like protein from Agrobacterium tumefaciens with an iron-sulfur cluster.

  PloS one 20110101

• Metabolomics of oxidative stress in recent studies of endogenous and exogenously administered intermediate metabolites.

  International journal of molecular sciences 20110101

• Methylation of the CpG sites only on the sense strand of the APC gene is specific for hepatocellular carcinoma.

  PloS one 20110101

• Critical appraisal of pralatrexate in the management of difficult-to-treat peripheral T cell lymphoma.

  Therapeutics and clinical risk management 20110101

• A flexible framework for sparse simultaneous component based data integration.

  BMC bioinformatics 20110101

• Massively parallel amplicon sequencing reveals isotype-specific variability of antimicrobial peptide transcripts in Mytilus galloprovincialis.

  PloS one 20110101

• The first report described as an important study: The association of mannose-binding lectin gene 2 polymorphisms in children with Down syndrome.

  Indian journal of human genetics 20110101

• Experimental Chemotherapy for Chagas Disease: A Morphological, Biochemical, and Proteomic Overview of Potential Trypanosoma cruzi Targets of Amidines Derivatives and Naphthoquinones.

  Molecular biology international 20110101

• Nucleotide Excision Repair in Caenorhabditis elegans.

  Molecular biology international 20110101

• Innovative Therapies against Human Glioblastoma Multiforme.

  ISRN oncology 20110101

• Serum metabolic profile in multiple sclerosis patients.

  Multiple sclerosis international 20110101

• DNA-nanostructure-assembly by sequential spotting.

  Journal of nanobiotechnology 20110101

• Comparative Study of different msDNA (multicopy single-stranded DNA) structures and phylogenetic comparison of reverse transcriptases (RTs): evidence for vertical inheritance.

  Bioinformation 20110101

• Association of MDR1 gene SNPs and haplotypes with the tacrolimus dose requirements in Han Chinese liver transplant recipients.

  PloS one 20110101

• Germline stem cell gene PIWIL2 mediates DNA repair through relaxation of chromatin.

  PloS one 20110101

• Endothelial nitric oxide synthase gene polymorphism (G894T) and diabetes mellitus (type II) among South Indians.

  Oxidative medicine and cellular longevity 20110101

• Anisotropic nanomaterials: structure, growth, assembly, and functions.

  Nano reviews 20110101

• Identification of Mycobacterium spp. of veterinary importance using rpoB gene sequencing.

  BMC veterinary research 20110101

• Analysis of CpG methylation sites and CGI among human papillomavirus DNA genomes.

  BMC genomics 20110101

• The association of DNA damage response and nucleotide level modulation with the antibacterial mechanism of the anti-folate drug trimethoprim.

  BMC genomics 20110101

• Molecular genetic analysis of retinitis pigmentosa in Indonesia using genome-wide homozygosity mapping.

  Molecular vision 20110101

• A contracted DNA repeat in LHX3 intron 5 is associated with aberrant splicing and pituitary dwarfism in German shepherd dogs.

  PloS one 20110101

• Universal endogenous gene controls for bisulphite conversion in analysis of plant DNA methylation.

  Plant methods 20110101

• [Immunogenic properties and molecular-genetic features of native and inactivated Chlamydia trachomatis MT-2A serovariant D strain].

  Zhurnal mikrobiologii, epidemiologii, i immunobiologii 20110101

• High resolution profiling of human exon methylation by liquid hybridization capture-based bisulfite sequencing.

  BMC genomics 20110101

• Enhanced expression of membrane proteins in E. coli with a P(BAD) promoter mutant: synergies with chaperone pathway engineering strategies.

  Microbial cell factories 20110101

• Quartz crystal microbalance detection of DNA single-base mutation based on monobase-coded cadmium tellurium nanoprobe.

  Analytical sciences : the international journal of the Japan Society for Analytical Chemistry 20110101

• Tegafur/gimeracil/oteracil (S-1) approved for the treatment of advanced gastric cancer in adults when given in combination with cisplatin: a review comparing it with other fluoropyrimidine-based therapies.

  OncoTargets and therapy 20110101

• Evidence for widespread genomic methylation in the migratory locust, Locusta migratoria (Orthoptera: Acrididae).

  PloS one 20110101

• DNA damage in plant herbarium tissue.

  PloS one 20110101

• Biochemical and molecular mechanisms of folate transport in rat pancreas; interference with ethanol ingestion.

  PloS one 20110101

• Comparative genomic and transcriptomic characterization of the toxigenic marine dinoflagellate Alexandrium ostenfeldii.

  PloS one 20110101

• SHIV-162P3 infection of rhesus macaques given maraviroc gel vaginally does not involve resistant viruses.

  PloS one 20110101

• The NTD Nanoscope: potential applications and implementations.

  BMC bioinformatics 20110101

• Stability of double-stranded oligonucleotide DNA with a bulged loop: a microarray study.

  BMC biophysics 20110101

• Parent-of-origin effects in SOX2 anophthalmia syndrome.

  Molecular vision 20110101

• Detection and diversity evaluation of tetracycline resistance genes in grassland-based production systems in Colombia, South america.

  Frontiers in microbiology 20110101

• Mitochondrial haplogroups, control region polymorphisms and malignant melanoma: a study in middle European Caucasians.

  PloS one 20110101

• Regulation of human formyl peptide receptor 1 synthesis: role of single nucleotide polymorphisms, transcription factors, and inflammatory mediators.

  PloS one 20110101

• The association of APE1 -656T > G and 1349 T > G polymorphisms and cancer risk: a meta-analysis based on 37 case-control studies.

  BMC cancer 20110101

• Characterization of a proximal Sp1 response element in the mouse Dlk2 gene promoter.

  BMC molecular biology 20110101

• Detecting the symplesiomorphy trap: a multigene phylogenetic analysis of terebelliform annelids.

  BMC evolutionary biology 20110101

• Direct detection and sequencing of damaged DNA bases.

  Genome integrity 20110101

• Epigenetics in prostate cancer.

  Prostate cancer 20110101

• Checkpoint signaling, base excision repair, and PARP promote survival of colon cancer cells treated with 5-fluorodeoxyuridine but not 5-fluorouracil.

  PloS one 20110101

• High-capacity conductive nanocellulose paper sheets for electrochemically controlled extraction of DNA oligomers.

  PloS one 20110101

• The mutational spectrum in a cohort of Charcot-Marie-Tooth disease type 2 among the Han Chinese in Taiwan.

  PloS one 20110101

• Difficult phylogenetic questions: more data, maybe; better methods, certainly.

  BMC biology 20110101

• Opposite GC skews at the 5' and 3' ends of genes in unicellular fungi.

  BMC genomics 20110101

• Nucleotide diversity and molecular evolution of the WAG-2 gene in common wheat (Triticum aestivum L) and its relatives.

  Genetics and molecular biology 20110101

• Association between IgM anti-herpes simplex virus and plasma amyloid-beta levels.

  PloS one 20110101

• Predicting biological functions of compounds based on chemical-chemical interactions.

  PloS one 20110101

• Is There a Relationship between DNA Methylation and Phenotypic Plasticity in Invertebrates?

  Frontiers in physiology 20110101

• Folate production by probiotic bacteria.

  Nutrients 20110101

• Topical delivery of DNA oligonucleotide to induce p53 generation in the skin via thymidine dinucleotide (pTT)-encapsulated liposomal carrier.

  International journal of nanomedicine 20110101

• Caffeine abolishes the ultraviolet-induced REV3 translesion replication pathway in mouse cells.

  International journal of molecular sciences 20110101

• The role of the E2F transcription factor family in UV-induced apoptosis.

  International journal of molecular sciences 20110101

• Mycosporine and mycosporine-like amino acids: A paramount tool against ultra violet irradiation.

  Pharmacognosy reviews 20110101

• Mutagenesis as a tool in plant genetics, functional genomics, and breeding.

  International journal of plant genomics 20110101

• Risk conferred by FokI polymorphism of vitamin D receptor (VDR) gene for essential hypertension.

  Indian journal of human genetics 20110101

• A highly sensitive and selective competition assay for the detection of cysteine using mercury-specific DNA, Hg and Sybr Green I.

  Sensors (Basel, Switzerland) 20110101

• Mapping and analysis of the LINE and SINE type of repetitive elements in rice.

  Bioinformation 20110101

• Single-molecule sensing electrode embedded in-plane nanopore.

  Scientific reports 20110101

• Perfect Hamming code with a hash table for faster genome mapping.

  BMC genomics 20110101

• Papillary thyroid carcinoma: differential diagnosis and prognostic values of its different variants: review of the literature.

  ISRN oncology 20110101

• The effect of microhydration on ionization energies of thymine.

  Faraday discussions 20110101

• A Novel msDNA (Multicopy Single-Stranded DNA) Strain Present in Yersinia frederiksenii ATCC 33641 Contig01029 Enteropathogenic Bacteria with the Genomic Analysis of It's Retron.

  Journal of pathogens 20110101

• Comparative Study of Cyanobacterial and E. coli RNA Polymerases: Misincorporation, Abortive Transcription, and Dependence on Divalent Cations.

  Genetics research international 20110101

• PerPlot & PerScan: tools for analysis of DNA curvature-related periodicity in genomic nucleotide sequences.

  Microbial informatics and experimentation 20110101

• Integration of Principles of Systems Biology and Radiation Biology: Toward Development of in silico Models to Optimize IUdR-Mediated Radiosensitization of DNA Mismatch Repair Deficient (Damage Tolerant) Human Cancers.

  Frontiers in oncology 20110101

• Genetic regulation of the growth plate.

  Frontiers in endocrinology 20110101

• Identification of Escherichia coli mismatch-specific uracil DNA glycosylase as a robust xanthine DNA glycosylase.

  The Journal of biological chemistry 20101231

• Solvent free oxidation of primary alcohols and diols using thymine iron(III) catalyst.

  Chemical communications (Cambridge, England) 20101228

• Mitochondrial mode of action of a thymidine-based cisplatin analogue breaks resistance in cancer cells.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20101227

• Structural basis for proficient incorporation of dTTP opposite O6-methylguanine by human DNA polymerase iota.

  The Journal of biological chemistry 20101224

• Ferrocene-bis(thymine/uracil) conjugates: base pairing directed, spacer dependent self-assembly and supramolecular packing.

  The Journal of organic chemistry 20101217

• Novel insights into the use of Glowing LNA as nucleic acid detection probes--influence of labeling density and nucleobases.

  Bioorganic & medicinal chemistry letters 20101215

• Changes in the NMR metabolic profile of human microglial cells exposed to lipopolysaccharide or morphine.

  Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology 20101201

• Uracil in DNA--its biological significance.

  Mutation research 20101201

• Sunscreen prevention of melanoma in man and mouse.

  Pigment cell & melanoma research 20101201

• Both base excision repair and O6-methylguanine-DNA methyltransferase protect against methylation-induced colon carcinogenesis.

  Carcinogenesis 20101201

• Characterization of an unusual cold shock protein from Staphylococcus aureus.

  Journal of basic microbiology 20101201

• Clinical, pathological and genetic evaluations of Chinese patients with autosomal-dominant hypophosphatasia.

  Archives of oral biology 20101201

• Insights into the mechanism of dihydropyrimidine dehydrogenase from site-directed mutagenesis targeting the active site loop and redox cofactor coordination.

  Biochimica et biophysica acta 20101201

• Mapping the ligand binding sites of kainate receptors: molecular determinants of subunit-selective binding of the antagonist [3H]UBP310.

  Molecular pharmacology 20101201

• Genetic etiology and dental pulp cell deficiency of hypophosphatasia.

  Journal of dental research 20101201

• Novel WDR72 mutation and cytoplasmic localization.

  Journal of dental research 20101201

• Design, synthesis and inhibitory activity against Mycobacterium tuberculosis thymidine monophosphate kinase of acyclic nucleoside analogues with a distal imidazoquinolinone.

  European journal of medicinal chemistry 20101201

• Nanobiotechnology: sequencing at the end of the tunnel.

  Nature nanotechnology 20101201

• The phylogenetic position of Rhopalostroma as inferred from a polythetic approach.

  Persoonia 20101201

• Detection of T-T mismatches using mass spectrometry: specific interactions of Hg(II) with oligonucleotides rich in thymine (T).

  The journal of physical chemistry. B 20101125

• Electronic structure and spectroscopy of nucleic acid bases: ionization energies, ionization-induced structural changes, and photoelectron spectra.

  The journal of physical chemistry. A 20101125

• Hg(II) ion specifically binds with T:T mismatched base pair in duplex DNA.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20101122

• Common polymorphism +45T/G in adiponectin gene as potential modulator of in-stent restenosis development.

  International journal of cardiology 20101119

• Dynamics and efficiency of electron injection and transport in DNA using pyrenecarboxamide as an electron donor and 5-bromouracil as an electron acceptor.

  The journal of physical chemistry. B 20101118

• Synthesis and molecular modelling of double-functionalised nucleosides with aromatic moieties in the 5'-(S)-position and minor groove interactions in DNA zipper structures.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20101115

• One-electron oxidation of DNA: reaction at thymine.

  Chemical communications (Cambridge, England) 20101114

• Hydrogen bonding and structure of uracil-water and thymine-water complexes.

  Physical chemistry chemical physics : PCCP 20101114

• Molecular mechanism of base pairing infidelity during DNA duplication upon one-electron oxidation.

  World journal of clinical oncology 20101110

• Effect of substituents of alloxazine derivatives on the selectivity and affinity for adenine in AP-site-containing DNA duplexes.

  Organic & biomolecular chemistry 20101107

• LNA 5'-phosphoramidites for 5'→3'-oligonucleotide synthesis.

  Organic & biomolecular chemistry 20101107

• Polymorphisms in the Hsp70 gene locus are genetically associated with systemic lupus erythematosus.

  Annals of the rheumatic diseases 20101101

• Polymorphisms in CYP2A13 and UGT1A7 genes and head and neck cancer susceptibility in North Indians.

  Oral diseases 20101101

• Effects of enhanced UV-B radiation on hydroxycinnamic acid derivatives extracted from different cell compartments in the aquatic liverwort Jungermannia exsertifolia subsp. cordifolia.

  Physiologia plantarum 20101101

• Environment influences on the aromatic character of nucleobases and amino acids.

  Journal of molecular modeling 20101101

• A novel SOD1 splice site mutation associated with familial ALS revealed by SOD activity analysis.

  Human molecular genetics 20101101

• Negative energy balance and hepatic gene expression patterns in high-yielding dairy cows during the early postpartum period: a global approach.

  Physiological genomics 20101101

• Partial selective inhibition of HIV-1 reverse transcriptase and human DNA polymerases γ and β by thiated 3'-fluorothymidine analogue 5'-triphosphates.

  Antiviral research 20101101

• Polymorphisms in the Matrilin-1 gene and risk of mandibular prognathism in Koreans.

  Journal of dental research 20101101

• Intragenic deletions and a deep intronic mutation affecting pre-mRNA splicing in the dihydropyrimidine dehydrogenase gene as novel mechanisms causing 5-fluorouracil toxicity.

  Human genetics 20101101

• Microsatellite instability in Arabidopsis increases with plant development.

  Plant physiology 20101101

• Taste genes associated with dental caries.

  Journal of dental research 20101101

• Label-free fluorescence detection of mercury(II) and glutathione based on Hg2+-DNA complexes stimulating aggregation-induced emission of a tetraphenylethene derivative.

  The Analyst 20101101

• Computational studies on effects of MDMA as an anticancer drug on DNA.

  Chemical biology & drug design 20101101

• Multidrug-resistant Salmonella enterica serovar Infantis, Israel.

  Emerging infectious diseases 20101101

• Correlation between genotype and supernumerary tooth formation in cleidocranial dysplasia.

  Orthodontics & craniofacial research 20101101

• A coastal cline in sodium accumulation in Arabidopsis thaliana is driven by natural variation of the sodium transporter AtHKT1;1.

  PLoS genetics 20101101

• Synthesis of oligodeoxynucleotides using fully protected deoxynucleoside 3'-phosphoramidite building blocks and base recognition of oligodeoxynucleotides incorporating N3-cyano-ethylthymine.

  Molecules (Basel, Switzerland) 20101027

• Theoretical predictions for ionization cross sections of DNA nucleobases impacted by light ions.

  Physics in medicine and biology 20101021

• Fragmentation patterns of core-ionized thymine and 5-bromouracil.

  The Journal of chemical physics 20101021

• DNA oligomers containing site-specific and stereospecific exocyclic deoxyadenosine adducts of 1,2,3,4-diepoxybutane: synthesis, characterization, and effects on DNA structure.

  Chemical research in toxicology 20101018

• Structural basis for adenosylcobalamin activation in AdoCbl-dependent ribonucleotide reductases.

  ACS chemical biology 20101015

• Colorimetric genotyping of single nucleotide polymorphism based on selective aggregation of unmodified gold nanoparticles.

  Biosensors & bioelectronics 20101015

• Alteration of cross-linking selectivity with the 2'-OMe analogue of 2-amino-6-vinylpurine and evaluation of antisense effects.

  Bioorganic & medicinal chemistry letters 20101015

• Development of a gold nano-particle-based fluorescent molecular beacon for detection of cystic fibrosis associated mutation.

  Biosensors & bioelectronics 20101015

• Mechanism of mercury detection based on interaction of single-strand DNA and hybridized DNA with gold nanoparticles.

  Talanta 20101015

• Vertical detachment energies of anionic thymidine: Microhydration effects.

  The Journal of chemical physics 20101014

• Molecular basis for recognition of nucleoside triphosphate by gene 4 helicase of bacteriophage T7.

  The Journal of biological chemistry 20101008

• Photoinduced dissociation of cyclobutane thymine dimer studied by semiclassical dynamics simulation.

  Journal of photochemistry and photobiology. B, Biology 20101005

• Organoplatinum(II) complexes with nucleobase motifs as inhibitors of human topoisomerase II catalytic activity.

  Chemistry, an Asian journal 20101004

• Investigation of interleukin-13 gene polymorphisms in individuals with chronic and generalized aggressive periodontitis in a Taiwanese (Chinese) population.

  Journal of periodontal research 20101001

• Increased sequence coverage of thymine-rich oligodeoxynucleotides by infrared multiphoton dissociation compared to collision-induced dissociation.

  Journal of mass spectrometry : JMS 20101001

• Plectin deficiency leads to both muscular dystrophy and pyloric atresia in epidermolysis bullosa simplex.

  Human mutation 20101001

• Quantitative analysis of thymine with surface-enhanced Raman spectroscopy and partial least squares (PLS) regression.

  Analytical and bioanalytical chemistry 20101001

• Investigation of riboflavin sensitized degradation of purine and pyrimidine derivatives of DNA and RNA under UVA and UVB.

  Biochemical and biophysical research communications 20101001

• Hypermethylation of carcinogen metabolism genes, CYP1A1, CYP2A13 and GSTM1 genes in head and neck cancer.

  Oral diseases 20101001

• Structural basis of HIV-1 resistance to AZT by excision.

  Nature structural & molecular biology 20101001

• Simultaneous disruption of two DNA polymerases, Polη and Polζ, in Avian DT40 cells unmasks the role of Polη in cellular response to various DNA lesions.

  PLoS genetics 20101001

• The naked truth: Sphynx and Devon Rex cat breed mutations in KRT71.

  Mammalian genome : official journal of the International Mammalian Genome Society 20101001

• The de novo cytosine methyltransferase DRM2 requires intact UBA domains and a catalytically mutated paralog DRM3 during RNA-directed DNA methylation in Arabidopsis thaliana.

  PLoS genetics 20101001

• Transition state analysis of thymidine hydrolysis by human thymidine phosphorylase.

  Journal of the American Chemical Society 20100929

• Photoinduced ring opening reactions and subsequent thermal ring closure reactions in the thymine-ammonia system and related systems.

  Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 20100924

• Conformational control of thymine photodimerization in single-strand and duplex DNA containing locked nucleic acid TT steps.

  Journal of the American Chemical Society 20100922

• Mechanical tuning of molecular recognition to discriminate the single-methyl-group difference between thymine and uracil.

  Journal of the American Chemical Society 20100922

• Accumulation of thymidine-derived sugars in thymidine phosphorylase overexpressing cells.

  Biochemical pharmacology 20100915

• Base pair opening kinetics and dynamics in the DNA duplexes that specifically recognized by very short patch repair protein (Vsr).

  Archives of biochemistry and biophysics 20100915

• Aberrant repair of etheno-DNA adducts in leukocytes and colon tissue of colon cancer patients.

  Free radical biology & medicine 20100915

• Regenerable DNA-functionalized hydrogels for ultrasensitive, instrument-free mercury(II) detection and removal in water.

  Journal of the American Chemical Society 20100915

• Programmable periodicity of quantum dot arrays with DNA origami nanotubes.

  Nano letters 20100908

• Detection of nucleic acids with graphene nanopores: ab initio characterization of a novel sequencing device.

  Nano letters 20100908

• New insight on structural properties of hydrated nucleic acid bases from ab initio molecular dynamics.

  Physical chemistry chemical physics : PCCP 20100907

• Incorporation of thymine nucleotides by DNA polymerases through T-Hg(II)-T base pairing.

  Angewandte Chemie (International ed. in English) 20100903

• On the existence of the chair conformation in six-membered ring phosphates bearing an aryl group axially oriented at the C4 position: cyclic nucleotides as model compounds for cyclic phosph(on)ate and phosphoramide prodrugs.

  The Journal of organic chemistry 20100903

• The anionic (9-methyladenine)-(1-methylthymine) base pair solvated by formic acid. A computational and photoelectron spectroscopy study.

  The journal of physical chemistry. B 20100902

• Probing the structure of Leishmania donovani chagasi DHFR-TS: comparative protein modeling and protein-ligand interaction studies.

  Journal of molecular modeling 20100901

• Ectrodactyly-ectodermal dysplasia-clefting syndrome associated with p63 mutation and an uncommon phenotype.

  The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association 20100901

• O6-methylguanine-DNA methyltransferase gene coding region polymorphisms and oral cancer risk.

  Journal of oral pathology & medicine : official publication of the International Association of Oral Pathologists and the American Academy of Oral Pathology 20100901

• Genetic engineering approach for the production of rhamnosyl and allosyl flavonoids from Escherichia coli.

  Biotechnology and bioengineering 20100901

• The ham-5, rcm-1 and rco-1 genes regulate hyphal fusion in Neurospora crassa.

  Microbiology (Reading, England) 20100901

• Mutations in maltose-binding protein that alter affinity and solubility properties.

  Applied microbiology and biotechnology 20100901

• Application of ant colony optimization in development of models for prediction of anti-HIV-1 activity of HEPT derivatives.

  Journal of computational chemistry 20100901

• Novel nucleosides as potent influenza viral inhibitors.

  Bioorganic & medicinal chemistry 20100901

• Synthesis of novel acyclic nucleoside analogues with anti-retroviral activity.

  Nucleosides, nucleotides & nucleic acids 20100901

• Transcription termination in the plasmid/virus hybrid pSSVx from Sulfolobus islandicus.

  Extremophiles : life under extreme conditions 20100901

• Fundamental properties of oligo double-stranded DNA/single-walled carbon nanotube nanobiohybrids.

  Nanoscale 20100901

• [Determination of thymine, hypoxanthine and uracil contents in medical pipefish by HPLC].

  Zhongguo Zhong yao za zhi = Zhongguo zhongyao zazhi = China journal of Chinese materia medica 20100901

• Importance of molecular cell biology investigations in human medicine in the story of the Hutchinson-Gilford progeria syndrome.

  Interdisciplinary toxicology 20100901

• The anatomy of a chromosome.

  The Ulster medical journal 20100901

• Regulation and functional contribution of thymidine kinase 1 in repair of DNA damage.

  The Journal of biological chemistry 20100827

• Click reactions and boronic acids: applications, issues, and potential solutions.

  Molecules (Basel, Switzerland) 20100823

• Zinc-cyclen coordination to UTP, TTP or pyrophosphate induces pyrene excimer emission.

  Dalton transactions (Cambridge, England : 2003) 20100821

• Stacked graphene nanofibers for electrochemical oxidation of DNA bases.

  Physical chemistry chemical physics : PCCP 20100821

• Antifolate-induced depletion of intracellular glycine and purines inhibits thymineless death in E. coli.

  ACS chemical biology 20100820

• Determination of nucleotides, nucleosides and their transformation products in Cordyceps by ion-pairing reversed-phase liquid chromatography-mass spectrometry.

  Journal of chromatography. A 20100820

• Enhancement in fluorescence response by a quencher for amiloride upon binding to thymine opposite an abasic site in a DNA duplex.

  Analytica chimica acta 20100818

• Au NPs-enhanced surface plasmon resonance for sensitive detection of mercury(II) ions.

  Biosensors & bioelectronics 20100815

• A 5' extended IFN-stimulating response element is crucial for IFN-gamma-induced tripartite motif 22 expression via interaction with IFN regulatory factor-1.

  Journal of immunology (Baltimore, Md. : 1950) 20100815

• Ultrafast deactivation processes in the 2-aminopyridine dimer and the adenine-thymine base pair: similarities and differences.

  The Journal of chemical physics 20100814

• Structural and kinetic characterization of human deoxycytidine kinase variants able to phosphorylate 5-substituted deoxycytidine and thymidine analogues .

  Biochemistry 20100810

• Simple screening method for autoantigen proteins using the N-terminal biotinylated protein library produced by wheat cell-free synthesis.

  Journal of proteome research 20100806

• Synthesis, characterization, and binding property of isoelectronic analogues of nucleobases, B(6)-substituted 5-aza-6-borauracils and -thymines.

  Organic letters 20100806

• Photosensitized splitting of thymine dimer or oxetane unit by a covalently N-linked carbazole via electron transfer in different marcus regions.

  The journal of physical chemistry. B 20100805

• A novel and specific fluorescence reaction for uracil.

  Analytica chimica acta 20100803

• Topical calcitriol protects from UV-induced genetic damage but suppresses cutaneous immunity in humans.

  Experimental dermatology 20100801

• Measurement of kinetic parameters of human platelet DNA polymerase gamma.

  Methods (San Diego, Calif.) 20100801

• Role of heme oxygenase-1 in human endothelial cells: lesson from the promoter allelic variants.

  Arteriosclerosis, thrombosis, and vascular biology 20100801

• Correlations of creatine and six related pyrimidine metabolites and diabetic nephropathy in Chinese type 2 diabetic patients.

  Clinical biochemistry 20100801

• High-resolution characterization of Toxoplasma gondii transcriptome with a massive parallel sequencing method.

  DNA research : an international journal for rapid publication of reports on genes and genomes 20100801

• An alignment algorithm for bisulfite sequencing using the Applied Biosystems SOLiD System.

  Bioinformatics (Oxford, England) 20100801

• Hydrops fetalis associated with homozygosity for Hb Adana [alpha59(E8)Gly-->Asp (alpha2)].

  Hemoglobin 20100801

• Polymorphisms located in the region containing BHMT and BHMT2 genes as maternal protective factors for orofacial clefts.

  European journal of oral sciences 20100801

• CRISPLD2 polymorphisms are associated with non-syndromic cleft lip with or without cleft palate in a northern Chinese population.

  European journal of oral sciences 20100801

• A nuclear family A DNA polymerase from Entamoeba histolytica bypasses thymine glycol.

  PLoS neglected tropical diseases 20100801

• L157X nonsense mutation of the succinate dehydrogenase subunit B gene in a Japanese patient with right paraaortic paraganglioma.

  Endocrine 20100801

• [Simultaneous determination of 7 nucleosides in Asterias rollestoni using reversed-phase high performance liquid chromatography].

  Se pu = Chinese journal of chromatography 20100801

• Structural variability and the nature of intermolecular interactions in Watson-Crick B-DNA base pairs.

  The journal of physical chemistry. B 20100729

• Highly selective and sensitive DNA assay based on electrocatalytic oxidation of ferrocene bearing zinc(II)-cyclen complexes with diethylamine.

  Journal of the American Chemical Society 20100728

• Minor groove orientation of the KWKK peptide tethered via the N-terminal amine to the acrolein-derived 1,N2-gamma-hydroxypropanodeoxyguanosine lesion with a trimethylene linkage.

  Biochemistry 20100727

• Formation of aminyl radicals on electron attachment to AZT: abstraction from the sugar phosphate backbone versus one-electron oxidation of guanine.

  The journal of physical chemistry. B 20100722

• What fraction of DNA double-strand breaks produced by the direct effect is accounted for by radical pairs?

  The journal of physical chemistry. B 20100722

• Specific Hg(2+)-mediated perylene bisimide aggregation for highly sensitive detection of cysteine.

  Chemical communications (Cambridge, England) 20100721

• Conformational dependence of the electronic coupling for singlet excitation energy transfer in DNA. An INDO/S study.

  Physical chemistry chemical physics : PCCP 20100721

• Visual and light scattering spectrometric detections of melamine with polythymine-stabilized gold nanoparticles through specific triple hydrogen-bonding recognition.

  Chemical communications (Cambridge, England) 20100721

• Highly sensitive and selective label-free optical detection of mercuric ions using photon upconverting nanoparticles.

  Biosensors & bioelectronics 20100715

• Synthesis and anti-HIV activity of 2'-deoxy-2'-fluoro-4'-C-ethynyl nucleoside analogs.

  Bioorganic & medicinal chemistry letters 20100715

• UV-induced bond modifications in thymine and thymine dideoxynucleotide: structural elucidation of isomers by differential mobility mass spectrometry.

  Analytical chemistry 20100715

• Enhanced functional potential of nucleic acid aptamer libraries patterned to increase secondary structure.

  Journal of the American Chemical Society 20100714

• Excited-state dynamics of 6-aza-2-thiothymine and 2-thiothymine: highly efficient intersystem crossing and singlet oxygen photosensitization.

  The journal of physical chemistry. B 20100708

• Comparative reactivity of mismatched and unpaired bases in relation to their type and surroundings. Chemical cleavage of DNA mismatches in mutation detection analysis.

  Biochimie 20100701

• Altered enamelin phosphorylation site causes amelogenesis imperfecta.

  Journal of dental research 20100701

• SNPs of Fc-gamma receptor genes and chronic periodontitis.

  Journal of dental research 20100701

• Genomic bipyrimidine nucleotide frequency and microbial reactions to germicidal UV radiation.

  Archives of microbiology 20100701

• A novel nucleotide kinase encoded by gene 1.7 of bacteriophage T7.

  Molecular microbiology 20100701

• Analysis of oxidized phospholipids by MALDI mass spectrometry using 6-aza-2-thiothymine together with matrix additives and disposable target surfaces.

  Analytical chemistry 20100701

• LC-MS/MS coupled with stable isotope dilution method for the quantification of 6-thioguanine and S(6)-methylthioguanine in genomic DNA of human cancer cells treated with 6-thioguanine.

  Analytical chemistry 20100701

• [Sequencing and analysis of the complete mitochondrial genome of the King Cobra, Ophiophagus hannah (Serpents: Elapidae)].

  Yi chuan = Hereditas 20100701

• Electronic parameters for charge transfer along DNA.

  The European physical journal. E, Soft matter 20100701

• The 1-carbamoyl-2-oxo-4,5-dihydroxyimidazolidine component of ROS-induced DNA damage in white blood cells.

  Radiation research 20100701

• Breast cancer DNA methylation profiles are associated with tumor size and alcohol and folate intake.

  PLoS genetics 20100701

• Authentication of Curcuma species (Zingiberaceae) based on nuclear 18S rDNA and plastid trnK sequences.

  Yao xue xue bao = Acta pharmaceutica Sinica 20100701

• New trends in nucleoside biotechnology.

  Acta naturae 20100701

• Succinyl methacrylate polymerized in porous-layered phases for open-tubular capillary electrochromatography: comparison with silica hydride monolayered phases.

  Journal of chromatography. A 20100625

• Structure and mechanism of human DNA polymerase eta.

  Nature 20100624

• The formation of DNA photodamage: the role of exciton localization.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20100621

• Spectroscopic and calorimetric studies on the triplex formation with oligonucleotide-ligand conjugates.

  Bioconjugate chemistry 20100616

• Crystal structure of an intermolecular 2:1 complex between adenine and thymine. Evidence for both Hoogsteen and 'quasi-Watson-Crick' interactions.

  Bioorganic & medicinal chemistry letters 20100615

• A convenient spectrometric assay system for intracellular quantitative measurement of DNA glycosylase activity.

  Acta biochimica et biophysica Sinica 20100615

• One-electron oxidation of DNA by ionizing radiation: competition between base-to-base hole-transfer and hole-trapping.

  The journal of physical chemistry. B 20100610

• DNA polymerases beta and lambda bypass thymine glycol in gapped DNA structures.

  Biochemistry 20100608

• The role played by exons in genomic DNA sequence correlations.

  Journal of theoretical biology 20100607

• Tip-enhanced Raman spectroscopic studies of the hydrogen bonding between adenine and thymine adsorbed on Au (111).

  Chemphyschem : a European journal of chemical physics and physical chemistry 20100607

• Effects of β-aminoisobutyric acid on leptin production and lipid homeostasis: mechanisms and possible relevance for the prevention of obesity.

  Fundamental & clinical pharmacology 20100601

• Brachmann-de Lange syndrome with congenital diaphragmatic hernia and NIPBL gene mutation.

  Congenital anomalies 20100601

• Effect of the bases flanking an abasic site on the recognition of nucleobase by amiloride.

  Biochimica et biophysica acta 20100601

• The del/del genotype of the nuclear factor-kappaB -94ATTG polymorphism and its relation to aggressive periodontitis.

  Journal of periodontal research 20100601

• A novel construction of genome space with biological geometry.

  DNA research : an international journal for rapid publication of reports on genes and genomes 20100601

• Combinatorial-computational-chemoinformatics (C3) approach to finding and analyzing low-energy tautomers.

  Journal of computer-aided molecular design 20100601

• Binding affinity and mode of distamycin A with A/T stretches in double-stranded DNA: importance of the terminal A/T residues.

  Biophysical chemistry 20100601

• Simultaneous determination of nine nucleosides and nucleobases in different Fritillaria species by HPLC-diode array detector.

  Journal of separation science 20100601

• Subcritical fluid chromatography of water soluble nucleobases on various polar stationary phases facilitated with alcohol-modified CO2 and water as the polar additive.

  Journal of separation science 20100601

• DNA methyltransferase 3-like affects promoter methylation of thymine DNA glycosylase independently of DNMT1 and DNMT3B in cancer cells.

  International journal of oncology 20100601

• Complementary effects of antioxidants and sunscreens in reducing UV-induced skin damage as demonstrated by skin biomarker expression.

  Journal of cosmetic and laser therapy : official publication of the European Society for Laser Dermatology 20100601

• Stalled replication fork repair and misrepair during thymineless death in Escherichia coli.

  Genes to cells : devoted to molecular & cellular mechanisms 20100601

• The evolution of a high copy gene array in Arabidopsis.

  Journal of molecular evolution 20100601

• Products of thymine oxygenation by a non-heme oxygenation model, Fe(II)(MeCN)6(2+)-Ac2O-H2O2, and the transition state model between oxoiron and thymine.

  Chemical & pharmaceutical bulletin 20100601

• Increased migration by stimulation of thymidine phosphorylase in endothelial cells of different origin.

  Nucleosides, nucleotides & nucleic acids 20100601

• Dihydropyrimidine dehydrogenase deficiency caused by a novel genomic deletion c.505_513del of DPYD.

  Nucleosides, nucleotides & nucleic acids 20100601

• Profile of Expression of Helicobacter pylori gamma-glutamyltranspeptidase.

  Helicobacter 20100601

• MTHFR and MSX1 contribute to the risk of nonsyndromic cleft lip/palate.

  European journal of oral sciences 20100601

• Susceptibility locus for non-syndromic cleft lip with or without cleft palate on chromosome 10q25 confers risk in Estonian patients.

  European journal of oral sciences 20100601

• Recent advances in combination treatments for photoaging: review of the literature.

  Dermatologic surgery : official publication for American Society for Dermatologic Surgery [et al.] 20100601

• N,3'-cyclo-5'-O-Cyano-methyl-thymidine.

  Acta crystallographica. Section E, Structure reports online 20100601

• Structural basis for the efficient phosphorylation of AZT-MP (3'-azido-3'-deoxythymidine monophosphate) and dGMP by Plasmodium falciparum type I thymidylate kinase.

  The Biochemical journal 20100527

• 3'-bromo analogues of pyrimidine nucleosides as a new class of potent inhibitors of Mycobacterium tuberculosis.

  Journal of medicinal chemistry 20100527

• Rapid characterization of cross-links, mono-adducts, and non-covalent binding of psoralens to deoxyoligonucleotides by LC-UV/ESI-MS and IRMPD mass spectrometry.

  The Analyst 20100526

• Ion-induced DNAzyme switches.

  Chemical communications (Cambridge, England) 20100521

• Ab initio investigation of the methylation and hydration effects on the electronic spectra of uracil and thymine.

  Physical chemistry chemical physics : PCCP 20100521

• Exploring the sloped-to-peaked S2/S1 seam of intersection of thymine with electronic structure and direct quantum dynamics calculations.

  Physical chemistry chemical physics : PCCP 20100521

• The UV absorption of nucleobases: semi-classical ab initio spectra simulations.

  Physical chemistry chemical physics : PCCP 20100521

• Supersonic jet UV spectrum and nonradiative processes of the thymine analogue 5-methyl-2-hydroxypyrimidine.

  Physical chemistry chemical physics : PCCP 20100521

• The properties of small Ag clusters bound to DNA bases.

  The Journal of chemical physics 20100521

• Molecular recognition induced self-assembly of diblock copolymers: microspheres to vesicles.

  Macromolecular bioscience 20100514

• Thymine, adenine and lipoamino acid based gene delivery systems.

  Chemical communications (Cambridge, England) 20100514

• Design, synthesis, and complementary recognition of beta-hairpin peptides stabilized by artificial DNA base-pairing amino acids.

  Chemical communications (Cambridge, England) 20100507

• Vertical ionization potentials of nucleobases in a fully solvated DNA environment.

  The journal of physical chemistry. B 20100506

• Chemical constituents of a marine-derived endophytic fungus Penicillium commune G2M.

  Molecules (Basel, Switzerland) 20100504

• Synthesis of novel MMT/acyl-protected nucleo alanine monomers for the preparation of DNA/alanyl-PNA chimeras.

  Amino acids 20100501

• Site-specific labeling of nucleotides for making RNA for high resolution NMR studies using an E. coli strain disabled in the oxidative pentose phosphate pathway.

  Journal of biomolecular NMR 20100501

• Internal energies of ion-sputtered neutral tryptophan and thymine molecules determined by vacuum ultraviolet photoionization.

  Analytical chemistry 20100501

• Design of environmentally sensitive fluorescent 2'-deoxyguanosine containing arylethynyl moieties: distinction of thymine base by base-discriminating fluorescent (BDF) probe.

  Bioorganic & medicinal chemistry letters 20100501

• The role of thymidine phosphorylase in the induction of early growth response protein-1 and thrombospondin-1 by 5-fluorouracil in human cancer carcinoma cells.

  International journal of oncology 20100501

• Absence of hotspot mutations in exons 9 and 20 of the PIK3CA gene in human oral squamous cell carcinoma in the Greek population.

  Oral surgery, oral medicine, oral pathology, oral radiology, and endodontics 20100501

• Treatment outcomes of clevudine versus lamivudine at week 48 in naïve patients with HBeAg positive chronic hepatitis B.

  Journal of Korean medical science 20100501

• Mutation bias favors protein folding stability in the evolution of small populations.

  PLoS computational biology 20100501

• Denaturation patterns in heterogeneous DNA.

  Physical review. E, Statistical, nonlinear, and soft matter physics 20100501

• Genetics of congenital heart disease.

  Current cardiology reviews 20100501

• Evidence of formation of adenine dimer cation radical in DNA: the importance of adenine base stacking.

  The journal of physical chemistry. B 20100429

• The 5-methyl group in thymine dynamically influences the structure of A-tracts in DNA at the local and global level.

  The journal of physical chemistry. B 20100429

• Agelastatin E, agelastatin F, and benzosceptrin C from the marine sponge Agelas dendromorpha.

  Journal of natural products 20100423

• Theoretical study of physisorption of nucleobases on boron nitride nanotubes: a new class of hybrid nano-biomaterials.

  Nanotechnology 20100423

• Oxidation reactions of cytosine DNA components by hydroxyl radical and one-electron oxidants in aerated aqueous solutions.

  Accounts of chemical research 20100420

• The acyclic 2,4-diaminopyrimidine nucleoside phosphonate acts as a purine mimetic in HIV-1 reverse transcriptase DNA polymerization.

  The Journal of biological chemistry 20100416

• Photoelectron spectroscopy of homogeneous nucleic acid base dimer anions.

  Physical chemistry chemical physics : PCCP 20100414

• Hydration of nucleic acid bases: a Car-Parrinello molecular dynamics approach.

  Physical chemistry chemical physics : PCCP 20100414

• A De Novo mutation of STK11 gene in a Chinese patient with Peutz-Jeghers syndrome.

  Digestive diseases and sciences 20100401

• Trypanosoma brucei brucei: thymine 7-hydroxylase-like proteins.

  Experimental parasitology 20100401

• Synthesis of 4,6-dideoxy-3-fluoro-2-keto-beta-D-glucopyranosyl analogues of 5-fluorouracil, N6-benzoyl adenine, uracil, thymine, N4-benzoyl cytosine and evaluation of their antitumor activities.

  Bioorganic chemistry 20100401

• Octyl methoxycinnamate modulates gene expression and prevents cyclobutane pyrimidine dimer formation but not oxidative DNA damage in UV-exposed human cell lines.

  Toxicological sciences : an official journal of the Society of Toxicology 20100401

• Dimer-dimer stacking interactions are important for nucleic acid binding by the archaeal chromatin protein Alba.

  The Biochemical journal 20100401

• Fast and SNP-tolerant detection of complex variants and splicing in short reads.

  Bioinformatics (Oxford, England) 20100401

• T-786C polymorphism of the endothelial nitric oxide synthase gene and neuralgia-inducing cavitational osteonecrosis of the jaws.

  Oral surgery, oral medicine, oral pathology, oral radiology, and endodontics 20100401

• UGT2B7_-161C>T polymorphism is associated with lamotrigine concentration-to-dose ratio in a multivariate study.

  Therapeutic drug monitoring 20100401

• Folate, DNA damage and the aging brain.

  Mechanisms of ageing and development 20100401

• A promoter polymorphism of the endothelial nitric oxide synthase gene is associated with reduced mRNA and protein expression in failing human myocardium.

  Journal of cardiac failure 20100401

• In vitro tools for photobiological testing: molecular responses to simulated solar UV of keratinocytes growing as monolayers or as part of reconstructed skin.

  Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 20100401

• Recent advances in combined modality therapy.

  The oncologist 20100401

• Titan's primordial soup: formation of amino acids via low-temperature hydrolysis of tholins.

  Astrobiology 20100401

• [Chemical constituents of a new species of Spongia sponge].

  Zhongguo Zhong yao za zhi = Zhongguo zhongyao zazhi = China journal of Chinese materia medica 20100401

• Selectivity of Enzymatic Conversion of Oligonucleotide Probes during Nucleotide Polymorphism Analysis of DNA.

  Acta naturae 20100401

• Structure of the 1,N(2)-etheno-2'-deoxyguanosine lesion in the 3'-G(epsilon dG)T-5' sequence opposite a one-base deletion.

  Biochemistry 20100330

• Structural basis of substrate binding in WsaF, a rhamnosyltransferase from Geobacillus stearothermophilus.

  Journal of molecular biology 20100326

• Crystal structure of a replicative DNA polymerase bound to the oxidized guanine lesion guanidinohydantoin.

  Biochemistry 20100323

• Replacement of Ala by Aib improves structuration and biological stability in thymine-based alpha-nucleopeptides.

  Organic & biomolecular chemistry 20100321

• One-electron oxidation of DNA: thymine versus guanine reactivity.

  Organic & biomolecular chemistry 20100321

• Reverse-direction (5'-->3') synthesis of oligonucleotides containing a 3'-S-phosphorothiolate linkage and 3'-terminal 3'-thionucleosides.

  Organic & biomolecular chemistry 20100321

• Theoretical investigation of hydrogen atom transfer in the adenine-thymine base pair and its coupling with the electronic rearrangement. Concerted vs. stepwise mechanism.

  Physical chemistry chemical physics : PCCP 20100320

• Stability of DNA duplexes containing hypoxanthine (inosine): gas versus solution phase and biological implications.

  The Journal of organic chemistry 20100319

• MutSbeta exceeds MutSalpha in dinucleotide loop repair.

  British journal of cancer 20100316

• Novel enzymatic function of DNA polymerase nu in translesion DNA synthesis past major groove DNA-peptide and DNA-DNA cross-links.

  Chemical research in toxicology 20100315

• A new photoproduct of 5-methylcytosine and adenine characterized by high-performance liquid chromatography and mass spectrometry.

  Chemical research in toxicology 20100315

• The effect of pi-stacking, H-bonding, and electrostatic interactions on the ionization energies of nucleic acid bases: adenine-adenine, thymine-thymine and adenine-thymine dimers.

  Physical chemistry chemical physics : PCCP 20100314

• Repair of O4-alkylthymine by O6-alkylguanine-DNA alkyltransferases.

  The Journal of biological chemistry 20100312

• Structure-function analysis and molecular modeling of DNase catalytic antibodies.

  Immunology letters 20100310

• Carbon nanotube-DNA hybrid fluorescent sensor for sensitive and selective detection of mercury(II) ion.

  Chemical communications (Cambridge, England) 20100307

• Cytosines, but not purines, determine recombination activating gene (RAG)-induced breaks on heteroduplex DNA structures: implications for genomic instability.

  The Journal of biological chemistry 20100305

• Synthesis and biophysical evaluation of 2',4'-constrained 2'O-methoxyethyl and 2',4'-constrained 2'O-ethyl nucleic acid analogues.

  The Journal of organic chemistry 20100305

• Structural diversity and dynamics of genomic replication origins in Schizosaccharomyces pombe.

  The EMBO journal 20100303

• Expression and characterization of thymine-DNA glycosylase from Aeropyrum pernix.

  Protein expression and purification 20100301

• Differential stabilization of adenine quartets by anions and cations.

  Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 20100301

• NFATc1 and TNFalpha expression in giant cell lesions of the jaws.

  Journal of oral pathology & medicine : official publication of the International Association of Oral Pathologists and the American Academy of Oral Pathology 20100301

• Cloning, purification and characterisation of a recombinant purine nucleoside phosphorylase from Bacillus halodurans Alk36.

  Extremophiles : life under extreme conditions 20100301

• Thymineless death is associated with loss of essential genetic information from the replication origin.

  Molecular microbiology 20100301

• N1-Heterocyclic pyrimidinediones as non-nucleoside inhibitors of HIV-1 reverse transcriptase.

  Bioorganic & medicinal chemistry letters 20100301

• N1-Alkyl pyrimidinediones as non-nucleoside inhibitors of HIV-1 reverse transcriptase.

  Bioorganic & medicinal chemistry letters 20100301

• The role of phosphate in the action of thymidine phosphorylase inhibitors: Implications for the catalytic mechanism.

  Bioorganic & medicinal chemistry letters 20100301

• Azidothymidine enhances fluorodeoxyuridine-mediated radiosensitization.

  International journal of radiation oncology, biology, physics 20100301

• Abstracts of the 16th Annual Society on NeuroImmune Pharmacology (SNIP) Conference. April 13-17, 2010. Manhattan Beach, California, USA.

  Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology 20100301

• Role of RecA and the SOS response in thymineless death in Escherichia coli.

  PLoS genetics 20100301

• Fatal cardiac arrhythmia and long-QT syndrome in a new form of congenital generalized lipodystrophy with muscle rippling (CGL4) due to PTRF-CAVIN mutations.

  PLoS genetics 20100301

• Psychiatric pharmacogenomic testing in clinical practice.

  Dialogues in clinical neuroscience 20100301

• A novel non-radioactive assay for HIV-RT (RdDp) based on pyrosequencing for high-throughput drug screening.

  Protein & cell 20100301

• An effective approach to artificial nucleases using copper(II) complexes bearing nucleobases.

  Dalton transactions (Cambridge, England : 2003) 20100227

• Identification and functional characterization of the first nucleobase transporter in mammals: implication in the species difference in the intestinal absorption mechanism of nucleobases and their analogs between higher primates and other mammals.

  The Journal of biological chemistry 20100226

• Very low energy electrons transform the cyclobutane-pyrimidine dimer into a highly reactive intermediate.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20100222

• Boronic acid-modified DNA that changes fluorescent properties upon carbohydrate binding.

  Chemical communications (Cambridge, England) 20100221

• Oxidation of DNA: damage to nucleobases.

  Accounts of chemical research 20100216

• Immobilization of oligonucleotides with homo-oligomer tails onto amine-functionalized solid substrates and the effects on hybridization.

  Analytical chemistry 20100215

• The electrochemical reduction of the purines guanine and adenine at platinum electrodes in several room temperature ionic liquids.

  Analytica chimica acta 20100205

• Non-specific DNA binding interferes with the efficient excision of oxidative lesions from chromatin by the human DNA glycosylase, NEIL1.

  DNA repair 20100204

• The oxidative DNA glycosylases of Mycobacterium tuberculosis exhibit different substrate preferences from their Escherichia coli counterparts.

  DNA repair 20100204

• Excited-state energies and electronic couplings of DNA base dimers.

  The journal of physical chemistry. B 20100204

• Precursor for biosynthesis of sugar moiety of doxorubicin depends on rhamnose biosynthetic pathway in Streptomyces peucetius ATCC 27952.

  Applied microbiology and biotechnology 20100201

• Prion protein amyloidosis with divergent phenotype associated with two novel nonsense mutations in PRNP.

  Acta neuropathologica 20100201

• Mononuclear and dinuclear mechanisms for catalysis of phosphodiester cleavage by alkaline earth metal ions in aqueous solution.

  Journal of inorganic biochemistry 20100201

• Rapid quantification of DNA methylation by measuring relative peak heights in direct bisulfite-PCR sequencing traces.

  Laboratory investigation; a journal of technical methods and pathology 20100201

• Design, synthesis and studies of triphosphate analogues for the production of anti AZT-TP antibodies.

  Bioorganic & medicinal chemistry letters 20100201

• Polymorphisms in the apoptosis-associated genes FAS and FASL and risk of oral cancer and malignant potential of oral premalignant lesions in a Taiwanese population.

  Journal of oral pathology & medicine : official publication of the International Association of Oral Pathologists and the American Academy of Oral Pathology 20100201

• Microwave-assisted syntheses of nucleosides and their precursors.

  Future medicinal chemistry 20100201

• 1-(1-Carboxy-methyl-1,4-anhydro-2,3-O-isopropyl-idene-α-d-erythrofuranos-yl)thymine.

  Acta crystallographica. Section E, Structure reports online 20100201

• Recurrent pregnancy loss and thrombophilia.

  Journal of clinical medicine research 20100201

• Multi-wall carbon nanotubes bonding on silica-hydride surfaces for open-tubular capillary electrochromatography.

  Journal of chromatography. A 20100129

• Tautomeric equilibrium of uracil and thymine in model protein-nucleic acid contacts. Spectroscopic and quantum chemical approach.

  The journal of physical chemistry. B 20100128

• Tautomerism of the natural thymidine nucleoside and the antiviral analogue D4T. Structure and influence of an aqueous environment using MP2 and DFT methods.

  Physical chemistry chemical physics : PCCP 20100128

• Effects of mercury(II) on structural properties, electronic structure and UV absorption spectra of a duplex containing thymine-mercury(II)-thymine nucleobase pairs.

  Physical chemistry chemical physics : PCCP 20100128

• High-resolution electron spectroscopy and structures of lithium-nucleobase (adenine, uracil, and thymine) complexes.

  The Journal of chemical physics 20100128

• MNAzymes, a versatile new class of nucleic acid enzymes that can function as biosensors and molecular switches.

  Journal of the American Chemical Society 20100127

• Comparison of intrinsic stacking energies of ten unique dinucleotide steps in A-RNA and B-DNA duplexes. Can we determine correct order of stability by quantum-chemical calculations?

  The journal of physical chemistry. B 20100121

• Energy barriers between H-bonded and stacked structures of 9-methyladenine...1-methylthymine and 9-methylguanine...1-methylcytosine complexes.

  Chemical communications (Cambridge, England) 20100121

• Efficient formation of the tandem thymine glycol/8-oxo-7,8-dihydroguanine lesion in isolated DNA and the mutagenic and cytotoxic properties of the tandem lesions in Escherichia coli cells.

  Chemical research in toxicology 20100118

• Selective recognition of uracil and its derivatives using a DNA repair enzyme structural mimic.

  The Journal of organic chemistry 20100115

• Analysis of the main nucleosides in Cordyceps sinensis by LC/ESI-MS.

  Molecules (Basel, Switzerland) 20100113

• NBD-based green fluorescent ligands for typing of thymine-related SNPs by using an abasic site-containing probe DNA.

  Chembiochem : a European journal of chemical biology 20100104

• Hydrogen sulfide induces oxidative damage to RNA and DNA in a sulfide-tolerant marine invertebrate.

  Physiological and biochemical zoology : PBZ 20100101

• Aggressive familial ALS with unusual brain MRI and a SOD1 gene mutation.

  Amyotrophic lateral sclerosis : official publication of the World Federation of Neurology Research Group on Motor Neuron Diseases 20100101

• Flavin-dependent thymidylate synthase: a novel pathway towards thymine.

  Archives of biochemistry and biophysics 20100101

• The interaction between thymine DNA glycosylase and nuclear receptor coactivator 3 is required for the transcriptional activation of nuclear hormone receptors.

  Molecular and cellular biochemistry 20100101

• Localized melting of duplex DNA by Cdc6/Orc1 at the DNA replication origin in the hyperthermophilic archaeon Pyrococcus furiosus.

  Extremophiles : life under extreme conditions 20100101

• Identification and characterisation of a novel GHR defect disrupting the polypyrimidine tract and resulting in GH insensitivity.

  European journal of endocrinology 20100101

• Ion trap collision-induced dissociation of locked nucleic acids.

  Journal of the American Society for Mass Spectrometry 20100101

• Diversity and evolution of chromatin proteins encoded by DNA viruses.

  Biochimica et biophysica acta 20100101

• Biomolecular response of oxanine in DNA strands to T4 polynucleotide kinase, T4 DNA ligase, and restriction enzymes.

  Biochemical and biophysical research communications 20100101

• Comparison of the disinfection effects of vacuum-UV (VUV) and UV light on Bacillus subtilis spores in aqueous suspensions at 172, 222 and 254 nm.

  Photochemistry and photobiology 20100101

• Analysis of interactions between genetic variants of BMP4 and environmental factors with nonsyndromic cleft lip with or without cleft palate susceptibility.

  International journal of oral and maxillofacial surgery 20100101

• SUMOylation regulates the nuclear mobility of CREB binding protein and its association with nuclear bodies in live cells.

  Biochemical and biophysical research communications 20100101

• Identification of single nucleotide polymorphisms within exon 1 of the canine mu-opioid receptor gene.

  Veterinary anaesthesia and analgesia 20100101

• The L441P mutation of cystic fibrosis transmembrane conductance regulator and its molecular pathogenic mechanisms in a Korean patient with cystic fibrosis.

  Journal of Korean medical science 20100101

• The Zur regulon of Corynebacterium glutamicum ATCC 13032.

  BMC genomics 20100101

• Analysis of a c0t-1 library enables the targeted identification of minisatellite and satellite families in Beta vulgaris.

  BMC plant biology 20100101

• 677C>T and 1298A>C polymorphisms of methylenetetrahydropholate reductase gene and biochemical parameters in Turkish population with spina bifida occulta.

  Turkish neurosurgery 20100101

• Genetic analysis of the Staphylococcus epidermidis macromolecular synthesis operon: Serp1129 is an ATP binding protein and sigA transcription is regulated by both sigma(A)- and sigma(B)-dependent promoters.

  BMC microbiology 20100101

• Characterization of nucleotide misincorporation patterns in the iceman's mitochondrial DNA.

  PloS one 20100101

• Heterologous expression of wheat VERNALIZATION 2 (TaVRN2) gene in Arabidopsis delays flowering and enhances freezing tolerance.

  PloS one 20100101

• Structural and mutational analysis of Escherichia coli AlkB provides insight into substrate specificity and DNA damage searching.

  PloS one 20100101

• Altered gene expression and DNA damage in peripheral blood cells from Friedreich's ataxia patients: cellular model of pathology.

  PLoS genetics 20100101

• A comparative approach for the investigation of biological information processing: an examination of the structure and function of computer hard drives and DNA.

  Theoretical biology & medical modelling 20100101

• Endothelial nitric oxide synthase gene Glu298Asp polymorphism in patients with coronary artery disease.

  Annals of Saudi medicine 20100101

• Relationship between operon preference and functional properties of persistent genes in bacterial genomes.

  BMC genomics 20100101

• A pilot clinical trial testing mutant von Hippel-Lindau peptide as a novel immune therapy in metastatic renal cell carcinoma.

  Journal of translational medicine 20100101

• Allosteric regulation of HIV-1 reverse transcriptase by ATP for nucleotide selection.

  PloS one 20100101

• Discrete wavelet transform de-noising in eukaryotic gene splicing.

  BMC bioinformatics 20100101

• A nonsense mutation in the beta-carotene oxygenase 2 (BCO2) gene is tightly associated with accumulation of carotenoids in adipose tissue in sheep (Ovis aries).

  BMC genetics 20100101

• U87MG decoded: the genomic sequence of a cytogenetically aberrant human cancer cell line.

  PLoS genetics 20100101

• The mitochondrial genome of the entomoparasitic green alga helicosporidium.

  PloS one 20100101

• The behaviour of 5-hydroxymethylcytosine in bisulfite sequencing.

  PloS one 20100101

• Mechanisms of chromosomal rearrangement in the human genome.

  BMC genomics 20100101

• Complementary UV-absorption of mycosporine-like amino acids and scytonemin is responsible for the UV-insensitivity of photosynthesis in Nostoc flagelliforme.

  Marine drugs 20100101

• Computational analysis and determination of a highly conserved surface exposed segment in H5N1 avian flu and H1N1 swine flu neuraminidase.

  BMC structural biology 20100101

• Whole methylome analysis by ultra-deep sequencing using two-base encoding.

  PloS one 20100101

• Quality evaluation of mycelial Antrodia camphorata using high-performance liquid chromatography (HPLC) coupled with diode array detector and mass spectrometry (DAD-MS).

  Chinese medicine 20100101

• Characterization of the octamer, a cis-regulatory element that modulates excretory cell gene-expression in Caenorhabditis elegans.

  BMC molecular biology 20100101

• APCR, factor V gene known and novel SNPs and adverse pregnancy outcomes in an Irish cohort of pregnant women.

  BMC pregnancy and childbirth 20100101

• The structure, organization and radiation of Sadhu non-long terminal repeat retroelements in Arabidopsis species.

  Mobile DNA 20100101

• How to slice: snapshots of Argonaute in action.

  Silence 20100101

• Transposable elements in a marginal plant population: temporal fluctuations provide new insights into genome evolution of wild diploid wheat.

  Mobile DNA 20100101

• Basal core promoters control the equilibrium between negative cofactor 2 and preinitiation complexes in human cells.

  Genome biology 20100101

• Genome-wide DNA demethylation in mammals.

  Genome biology 20100101

• An ab initio and AIM investigation into the hydration of 2-thioxanthine.

  Chemistry Central journal 20100101

• Conservation of neutral substitution rate and substitutional asymmetries in mammalian genes.

  Genome biology and evolution 20100101

• Evidence for a new species of Cryptosporidium infecting tortoises: Cryptosporidium ducismarci.

  Parasites & vectors 20100101

• Mitochondrial DNA analysis in primary congenital glaucoma.

  Molecular vision 20100101

• Host hindrance to HIV-1 replication in monocytes and macrophages.

  Retrovirology 20100101

• The complete mitochondrial genome of the fall webworm, Hyphantria cunea (Lepidoptera: Arctiidae).

  International journal of biological sciences 20100101

• Whole genome assembly of a natto production strain Bacillus subtilis natto from very short read data.

  BMC genomics 20100101

• Fidelity of target site duplication and sequence preference during integration of xenotropic murine leukemia virus-related virus.

  PloS one 20100101

• G-stack modulated probe intensities on expression arrays - sequence corrections and signal calibration.

  BMC bioinformatics 20100101

• Creating PWMs of transcription factors using 3D structure-based computation of protein-DNA free binding energies.

  BMC bioinformatics 20100101

• Identifying essential genes in bacterial metabolic networks with machine learning methods.

  BMC systems biology 20100101

• Emergence of rationally designed therapeutic strategies for breast cancer targeting DNA repair mechanisms.

  Breast cancer research : BCR 20100101

• BISMA--fast and accurate bisulfite sequencing data analysis of individual clones from unique and repetitive sequences.

  BMC bioinformatics 20100101

• A rapid method for the generation of uniform acellular bone explants: a technical note.

  Journal of orthopaedic surgery and research 20100101

• Development and characterization of an oat TILLING-population and identification of mutations in lignin and beta-glucan biosynthesis genes.

  BMC plant biology 20100101

• NUMT ('new mighty') hypothesis of longevity.

  Rejuvenation research 20100101

• Magnetic nanoformulation of azidothymidine 5'-triphosphate for targeted delivery across the blood-brain barrier.

  International journal of nanomedicine 20100101

• Plasma and synovial fluid microRNAs as potential biomarkers of rheumatoid arthritis and osteoarthritis.

  Arthritis research & therapy 20100101

• GC3 biology in corn, rice, sorghum and other grasses.

  BMC genomics 20100101

• Effects of Alu elements on global nucleosome positioning in the human genome.

  BMC genomics 20100101

• Transcription-associated mutagenesis increases protein sequence diversity more effectively than does random mutagenesis in Escherichia coli.

  PloS one 20100101

• Biosynthesis and molecular genetics of polyketides in marine dinoflagellates.

  Marine drugs 20100101

• Effect of beta-alanine supplementation on the onset of blood lactate accumulation (OBLA) during treadmill running: Pre/post 2 treatment experimental design.

  Journal of the International Society of Sports Nutrition 20100101

• Investigating the epigenetic effects of a prototype smoke-derived carcinogen in human cells.

  PloS one 20100101

• Sequence periodicity in nucleosomal DNA and intrinsic curvature.

  BMC structural biology 20100101

• SUMO-1 possesses DNA binding activity.

  BMC research notes 20100101

• Transcriptome analysis of the mobile genome ICEclc in Pseudomonas knackmussii B13.

  BMC microbiology 20100101

• Structural and dynamical effects induced by the anticancer drug topotecan on the human topoisomerase I - DNA complex.

  PloS one 20100101

• Targeting EGFR induced oxidative stress by PARP1 inhibition in glioblastoma therapy.

  PloS one 20100101

• Design and conformational analysis of natively folded β-hairpin peptides stabilized by nucleobase interactions.

  Biopolymers 20100101

• Quercetin abrogates chemoresistance in melanoma cells by modulating deltaNp73.

  BMC cancer 20100101

• Comparison of translation loads for standard and alternative genetic codes.

  BMC evolutionary biology 20100101

• Contrasting transcriptional responses of a virulent and an attenuated strain of Mycobacterium tuberculosis infecting macrophages.

  PloS one 20100101

• An integrated Bayesian analysis of LOH and copy number data.

  BMC bioinformatics 20100101

• Promoter- and cell-specific epigenetic regulation of CD44, Cyclin D2, GLIPR1 and PTEN by methyl-CpG binding proteins and histone modifications.

  BMC cancer 20100101

• Active DNA demethylation in human postmitotic cells correlates with activating histone modifications, but not transcription levels.

  Genome biology 20100101

• Comparison of two different screening methods for the KRAS mutation in colorectal cancer.

  Clinical laboratory 20100101

• Cotylenin A inhibits cell proliferation and induces apoptosis and PAX6 mRNA transcripts in retinoblastoma cell lines.

  Molecular vision 20100101

• A missense mutation in CRYBA4 associated with congenital cataract and microcornea.

  Molecular vision 20100101

• Small RNAs, DNA methylation and transposable elements in wheat.

  BMC genomics 20100101

• Mobile element scanning (ME-Scan) by targeted high-throughput sequencing.

  BMC genomics 20100101

• Zinc finger nucleases as tools to understand and treat human diseases.

  BMC medicine 20100101

• Gene therapy in glaucoma-part I: Basic mechanisms and molecular genetics.

  Oman journal of ophthalmology 20100101

• Cell cycle G2/M arrest through an S phase-dependent mechanism by HIV-1 viral protein R.

  Retrovirology 20100101

• Evaluation of an automated ultraviolet radiation device for decontamination of Clostridium difficile and other healthcare-associated pathogens in hospital rooms.

  BMC infectious diseases 20100101

• Extension of the PNA world by functionalized PNA monomers eligible candidates for inverse Diels Alder Click Chemistry.

  International journal of medical sciences 20100101

• Demethylation by 5-aza-2'-deoxycytidine in colorectal cancer cells targets genomic DNA whilst promoter CpG island methylation persists.

  BMC cancer 20100101

• Positive selection differs between protein secondary structure elements in Drosophila.

  Genome biology and evolution 20100101

• Hepatitis B virus genotypes and precore and core mutants in UAE patients.

  Virology journal 20100101

• Integration of physical and genetic maps of common bean through BAC-derived microsatellite markers.

  BMC genomics 20100101

• DNA-based applications in nanobiotechnology.

  Journal of biomedicine & biotechnology 20100101

• Characterization of the TnsD-attTn7 complex that promotes site-specific insertion of Tn7.

  Mobile DNA 20100101

• I-motif structures formed in the human c-MYC promoter are highly dynamic--insights into sequence redundancy and I-motif stability.

  PloS one 20100101

• What is a microsatellite: a computational and experimental definition based upon repeat mutational behavior at A/T and GT/AC repeats.

  Genome biology and evolution 20100101

• An evolutionarily conserved arginine is essential for Tre1 G protein-coupled receptor function during germ cell migration in Drosophila melanogaster.

  PloS one 20100101

• A method for automatically extracting infectious disease-related primers and probes from the literature.

  BMC bioinformatics 20100101

• Analysis of intra-genomic GC content homogeneity within prokaryotes.

  BMC genomics 20100101

• Modelling the ancestral sequence distribution and model frequencies in context-dependent models for primate non-coding sequences.

  BMC evolutionary biology 20100101

• Acute, multiple-dose dermal and genetic toxicity of Nu-3: a novel antimicrobial agent.

  Journal of biomedicine & biotechnology 20100101

• Subtle evolutionary changes in the distribution of N-glycosylation sequons in the HIV-1 envelope glycoprotein 120.

  International journal of biological sciences 20100101

• Redox regulation in cancer: a double-edged sword with therapeutic potential.

  Oxidative medicine and cellular longevity 20100101

• Transfer RNA gene arrangement and codon usage in vertebrate mitochondrial genomes: a new insight into gene order conservation.

  BMC genomics 20100101

• DNA mismatch repair in eukaryotes and bacteria.

  Journal of nucleic acids 20100101

• DNA-Destabilizing Agents as an Alternative Approach for Targeting DNA: Mechanisms of Action and Cellular Consequences.

  Journal of nucleic acids 20100101

• Structure and stability of a dimeric g-quadruplex formed by cyclic oligonucleotides.

  Journal of nucleic acids 20100101

• Structural determinants of photoreactivity of triplex forming oligonucleotides conjugated to psoralens.

  Journal of nucleic acids 20100101

• True lies: the double life of the nucleotide excision repair factors in transcription and DNA repair.

  Journal of nucleic acids 20100101

• Thrombin-Binding Aptamer Quadruplex Formation: AFM and Voltammetric Characterization.

  Journal of nucleic acids 20100101

• Selective Incision of the alpha-N-Methyl-Formamidopyrimidine Anomer by Escherichia coli Endonuclease IV.

  Journal of nucleic acids 20100101

• Evaluation of human telomeric g-quadruplexes: the influence of overhanging sequences on quadruplex stability and folding.

  Journal of nucleic acids 20100101

• Structural properties of g,t-parallel duplexes.

  Journal of nucleic acids 20100101

• Stimulation of DNA Glycosylase Activities by XPC Protein Complex: Roles of Protein-Protein Interactions.

  Journal of nucleic acids 20100101

• DNA methylation patterns provide insight into epigenetic regulation in the Pacific oyster (Crassostrea gigas).

  BMC genomics 20100101

• Altered ultrasonic vocalization and impaired learning and memory in Angelman syndrome mouse model with a large maternal deletion from Ube3a to Gabrb3.

  PloS one 20100101

• Polymorphic nucleic Acid binding of bioactive isoquinoline alkaloids and their role in cancer.

  Journal of nucleic acids 20100101

• Sequencing bias: comparison of different protocols of microRNA library construction.

  BMC biotechnology 20100101

• [Polymethylene derivatives of nucleic bases bearing omega-functional groups. VIII. omega-oxo-omega-phenylalkyl pyrimidines and purines].

  Bioorganicheskaia khimiia 20100101

• Substitution of adeno-associated virus Rep protein binding and nicking sites with human chromosome 19 sequences.

  Virology journal 20100101

• Axenfeld-Rieger Syndrome Associated with Congenital Glaucoma and Cytochrome P4501B1 Gene Mutations.

  Case reports in medicine 20100101

• On the traces of XPD: cell cycle matters - untangling the genotype-phenotype relationship of XPD mutations.

  Cell division 20100101

• Context dependent substitution biases vary within the human genome.

  BMC bioinformatics 20100101

• FATS is a transcriptional target of p53 and associated with antitumor activity.

  Molecular cancer 20100101

• Methylation-mediated deamination of 5-methylcytosine appears to give rise to mutations causing human inherited disease in CpNpG trinucleotides, as well as in CpG dinucleotides.

  Human genomics 20100101

• Age-associated modifications of Base Excision Repair activities in human skin fibroblast extracts.

  Mechanisms of ageing and development 20100101

• Duplicate dmbx1 genes regulate progenitor cell cycle and differentiation during zebrafish midbrain and retinal development.

  BMC developmental biology 20100101

• Genetic determinants of time perception mediated by the serotonergic system.

  PloS one 20100101

• A phenomenological model for predicting melting temperatures of DNA sequences.

  PloS one 20100101

• The Roles of Several Residues of Escherichia coli DNA Photolyase in the Highly Efficient Photo-Repair of Cyclobutane Pyrimidine Dimers.

  Journal of nucleic acids 20100101

• Fidelity in archaeal information processing.

  Archaea (Vancouver, B.C.) 20100101

• Characterisation of the SUMO-like domains of Schizosaccharomyces pombe Rad60.

  PloS one 20100101

• Metabolomic and functional genomic analyses reveal varietal differences in bioactive compounds of cooked rice.

  PloS one 20100101

• The DNA relaxation activity and covalent complex accumulation of Mycobacterium tuberculosis topoisomerase I can be assayed in Escherichia coli: application for identification of potential FRET-dye labeling sites.

  BMC biochemistry 20100101

• Reconstructing the evolutionary history of the radiation of the land snail genus Xerocrassa on Crete based on mitochondrial sequences and AFLP markers.

  BMC evolutionary biology 20100101

• Screening for bovine leukocyte adhesion deficiency, deficiency of uridine monophosphate synthase, complex vertebral malformation, bovine citrullinaemia, and factor XI deficiency in Holstein cows reared in Turkey.

  Acta veterinaria Scandinavica 20100101

• Transforming growth factor-β-1 polymorphisms are infrequent but exist at selected loci in oral submucous fibrosis.

  Indian journal of dental research : official publication of Indian Society for Dental Research 20100101

• Early Steps in the DNA Base Excision Repair Pathway of a Fission Yeast Schizosaccharomyces pombe.

  Journal of nucleic acids 20100101

• Translesion synthesis polymerases in the prevention and promotion of carcinogenesis.

  Journal of nucleic acids 20100101

• Characterization of a Y-Family DNA Polymerase eta from the Eukaryotic Thermophile Alvinella pompejana.

  Journal of nucleic acids 20100101

• Architecture of y-family DNA polymerases relevant to translesion DNA synthesis as revealed in structural and molecular modeling studies.

  Journal of nucleic acids 20100101

• Replication Past the γ-Radiation-Induced Guanine-Thymine Cross-Link G[8,5-Me]T by Human and Yeast DNA Polymerase η.

  Journal of nucleic acids 20100101

• Investigation and improvement of DNA cleavage models of polyamide + Cu(II) nuclease + OOH- ligands bound to DNA.

  BMC structural biology 20100101

• The complete mitochondrial genome of the citrus red mite Panonychus citri (Acari: Tetranychidae): high genome rearrangement and extremely truncated tRNAs.

  BMC genomics 20100101

• Genomic analysis and relatedness of P2-like phages of the Burkholderia cepacia complex.

  BMC genomics 20100101

• Low thymine content in PINK1 mRNAs and insights into Parkinson's disease.

  Bioinformation 20100101

• Error-Prone Translesion DNA Synthesis by Escherichia coli DNA Polymerase IV (DinB) on Templates Containing 1,2-dihydro-2-oxoadenine.

  Journal of nucleic acids 20100101

• Overview of DNA Repair in Trypanosoma cruzi, Trypanosoma brucei, and Leishmania major.

  Journal of nucleic acids 20100101

• Insights into the structures of DNA damaged by hydroxyl radical: crystal structures of DNA duplexes containing 5-formyluracil.

  Journal of nucleic acids 20100101

• Molecular mechanisms of the whole DNA repair system: a comparison of bacterial and eukaryotic systems.

  Journal of nucleic acids 20100101

• MYOC and FOXC1 gene analysis in primary congenital glaucoma.

  Molecular vision 20100101

• Panitumumab: the evidence for its use in the treatment of metastatic colorectal cancer.

  Core evidence 20100101

• Predicting success of oligomerized pool engineering (OPEN) for zinc finger target site sequences.

  BMC bioinformatics 20100101

• Repair of DNA Alkylation Damage by the Escherichia coli Adaptive Response Protein AlkB as Studied by ESI-TOF Mass Spectrometry.

  Journal of nucleic acids 20100101

• Modeling compositional dynamics based on GC and purine contents of protein-coding sequences.

  Biology direct 20100101

• The C-terminal domain of the MutL homolog from Neisseria gonorrhoeae forms an inverted homodimer.

  PloS one 20100101

• Are substitution rates and RNA editing correlated?

  BMC evolutionary biology 20100101

• Visual detection of Hg2+ with high selectivity using thymine modified gold nanoparticles.

  Analytical sciences : the international journal of the Japan Society for Analytical Chemistry 20100101

• Pash 3.0: A versatile software package for read mapping and integrative analysis of genomic and epigenomic variation using massively parallel DNA sequencing.

  BMC bioinformatics 20100101

• Optimization of 5-flurouracil solid-lipid nanoparticles: a preliminary study to treat colon cancer.

  International journal of medical sciences 20100101

• Structure and dynamics of the operon map of Buchnera aphidicola sp. strain APS.

  BMC genomics 20100101

• DNA polymerase η protein expression predicts treatment response and survival of metastatic gastric adenocarcinoma patients treated with oxaliplatin-based chemotherapy.

  Journal of translational medicine 20100101

• Quake: quality-aware detection and correction of sequencing errors.

  Genome biology 20100101

• Molecular approaches to identify cryptic species and polymorphic species within a complex community of fig wasps.

  PloS one 20100101

• Simple and rapid enzymatic method for the synthesis of single-strand oligonucleotides containing trifluorothymidine.

  Nucleosides, nucleotides & nucleic acids 20100101

• VSX1 gene analysis in keratoconus.

  Molecular vision 20100101

• Rev1, Rev3, or Rev7 siRNA Abolishes Ultraviolet Light-Induced Translesion Replication in HeLa Cells: A Comprehensive Study Using Alkaline Sucrose Density Gradient Sedimentation.

  Journal of nucleic acids 20100101

• Identification of retinoic acid in a high content screen for agents that overcome the anti-myogenic effect of TGF-beta-1.

  PloS one 20100101

• Pathogenic and Epiphenomenal Anti-DNA Antibodies in SLE.

  Autoimmune diseases 20100101

• Analysis of ultra low genome conservation in Clostridium difficile.

  PloS one 20100101

• Contamination of human DNA samples with mouse DNA can lead to false detection of XMRV-like sequences.

  Retrovirology 20100101

• Hydrogen peroxide induced genomic instability in nucleotide excision repair-deficient lymphoblastoid cells.

  Genome integrity 20100101

• Complete Mitochondrial Genome Sequence of Acrida cinerea (Acrididae: Orthoptera) and Comparative Analysis of Mitochondrial Genomes in Orthoptera.

  Comparative and functional genomics 20100101

• Polymers for improving the in vivo transduction efficiency of AAV2 vectors.

  PloS one 20100101

• Tissue distribution of 5-hydroxymethylcytosine and search for active demethylation intermediates.

  PloS one 20100101

• Constitutive overexpression of muscarinic receptors leads to vagal hyperreactivity.

  PloS one 20100101

• Molecular mechanisms of ultraviolet radiation-induced DNA damage and repair.

  Journal of nucleic acids 20100101

• Personalized medicine: FAQs.

  Indian journal of medical and paediatric oncology : official journal of Indian Society of Medical & Paediatric Oncology 20100101

• The HIV-1 integrase α4-helix involved in LTR-DNA recognition is also a highly antigenic peptide element.

  PloS one 20100101

• WordSeeker: concurrent bioinformatics software for discovering genome-wide patterns and word-based genomic signatures.

  BMC bioinformatics 20100101

• Formation and repair of tobacco carcinogen-derived bulky DNA adducts.

  Journal of nucleic acids 20100101

• Long-term (trophic) purinergic signalling: purinoceptors control cell proliferation, differentiation and death.

  Cell death & disease 20100101

• Insights from the GC content analysis of 76genome survey sequences (GSS) from Elaeisoleifera.

  Bioinformation 20100101

• Analysis of unigene derived microsatellite markers in family solanaceae.

  Bioinformation 20100101

• Mitochondrial genome nucleotide substitution pattern between domesticated silkmoth, Bombyx mori, and its wild ancestors, Chinese Bombyx mandarina and Japanese Bombyx mandarina.

  Genetics and molecular biology 20100101

• [Quantum-mechanical conformational analysis of the 5'-thymidilic acid molecule].

  Ukrains'kyi biokhimichnyi zhurnal (1999 ) 20100101

• Radiation-induced biomarkers for the detection and assessment of absorbed radiation doses.

  Journal of pharmacy & bioallied sciences 20100101

• SNP analysis of follistatin gene associated with polycystic ovarian syndrome.

  Advances and applications in bioinformatics and chemistry : AABC 20100101

• Label-free electrical detection of DNA hybridization using carbon nanotubes and graphene.

  Nano reviews 20100101

• Psoralea corylifolia Linn.-'Kushtanashini'.

  Pharmacognosy reviews 20100101

• Antimicrobial evaluation of novel substituted pyrimidinopyrazoles and pyrimidinotriazoles.

  Journal of advanced pharmaceutical technology & research 20100101

• Carbon nanostructure-based field-effect transistors for label-free chemical/biological sensors.

  Sensors (Basel, Switzerland) 20100101

• Classification of g-quadruplex DNA on the basis of the quadruplex twist angle and planarity of g-quartets.

  Acta naturae 20100101

• Uracil and thymine reactivity in the gas phase: the S(N)2 reaction and implications for electron delocalization in leaving groups.

  Journal of the American Chemical Society 20091230

• Role of two strictly conserved residues in nucleotide flipping and N-glycosylic bond cleavage by human thymine DNA glycosylase.

  The Journal of biological chemistry 20091225

• Characterization and transcriptional analysis of the promoter region of the Duffy blood group, chemokine receptor (DARC) gene in cattle.

  Veterinary immunology and immunopathology 20091215

• Intrafamilial clinical phenotypic heterogeneity with MAPT gene splice site IVS10+16C>T mutation.

  Journal of the neurological sciences 20091215

• Comparison of the sensitivity of evaporative universal detectors and LC/MS in the HILIC and the reversed-phase HPLC modes.

  Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 20091215

• The i-motif in the bcl-2 P1 promoter forms an unexpectedly stable structure with a unique 8:5:7 loop folding pattern.

  Journal of the American Chemical Society 20091209

• NMR investigation of DNA primer-template models: guanine templates are less prone to strand slippage upon misincorporation.

  Biochemistry 20091208

• OFF-ON fluorescent detection of thymidine nucleotides by a zinc(II)-cyclen complex bearing two diagonal pyrenes.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20091207

• Stabilization of radical anion states of nucleobases in DNA.

  Physical chemistry chemical physics : PCCP 20091207

• Redesign of high-affinity nonspecific nucleases with altered sequence preference.

  Journal of the American Chemical Society 20091202

• MCP-1 gene A-2518G polymorphism and carotid artery atherosclerosis in patients with type 2 diabetes.

  Diabetes research and clinical practice 20091201

• Association of PTPN22 C1858T and CTLA-4 A49G polymorphisms with Type 1 Diabetes in Croatians.

  Diabetes research and clinical practice 20091201

• Genetic risk factors for periodontitis in a Japanese population.

  Journal of dental research 20091201

• Strategy for molecular beacon binding readout: separating molecular recognition element and signal reporter.

  Analytical chemistry 20091201

• Clinical characteristics of renal cell carcinoma in Korean patients with von Hippel-Lindau disease compared to sporadic bilateral or multifocal renal cell carcinoma.

  Journal of Korean medical science 20091201

• Complete mitochondrial genome of the small brown planthopper, Laodelphax striatellus (Delphacidae: Hemiptera), with a novel gene order.

  Zoological science 20091201

• Stoichiometry of base excision repair proteins correlates with increased somatic CAG instability in striatum over cerebellum in Huntington's disease transgenic mice.

  PLoS genetics 20091201

• The effect of MTHFR c.677C>T on plasma homocysteine levels depends on health, age and smoking.

  Clinical and investigative medicine. Medecine clinique et experimentale 20091201

• Endothelial nitric oxide synthase (eNOS) gene polymorphism in early term chronic allograft nephropathy.

  Transplantation proceedings 20091201

• SOS response induces persistence to fluoroquinolones in Escherichia coli.

  PLoS genetics 20091201

• De novo mutation in the DSPP gene associated with dentinogenesis imperfecta type II in a Japanese family.

  European journal of oral sciences 20091201

• IRF6 gene variants in Central European patients with non-syndromic cleft lip with or without cleft palate.

  European journal of oral sciences 20091201

• An insertion/deletion variant of a thymine base in exon 2 of the porcine beta 3-adrenergic receptor gene associated with loin eye muscle area.

  Animal science journal = Nihon chikusan Gakkaiho 20091201

• Nonlinear breathing modes at a defect site in DNA.

  Physical review. E, Statistical, nonlinear, and soft matter physics 20091201

• Revisiting plus-strand DNA synthesis in retroviruses and long terminal repeat retrotransposons: dynamics of enzyme: substrate interactions.

  Viruses 20091201

• Determination of the biological activity and structure activity relationships of drugs based on the highly cytotoxic duocarmycins and CC-1065.

  Toxins 20091201

• Functional variation of the dopamine D2 receptor gene is associated with emotional control as well as brain activity and connectivity during emotion processing in humans.

  The Journal of neuroscience : the official journal of the Society for Neuroscience 20091125

• Designing of MIP based QCM sensor having thymine recognition sites based on biomimicking DNA approach.

  Biosensors & bioelectronics 20091115

• De novo computational prediction of non-coding RNA genes in prokaryotic genomes.

  Bioinformatics (Oxford, England) 20091115

• Formation of highly selective and efficient interstrand cross-linking to thymine without photo-irradiation.

  Chemical communications (Cambridge, England) 20091114

• Photodynamics simulations of thymine: relaxation into the first excited singlet state.

  The journal of physical chemistry. A 20091112

• Structural perturbations induced by the alpha-anomer of the aflatoxin B(1) formamidopyrimidine adduct in duplex and single-strand DNA.

  Journal of the American Chemical Society 20091111

• Synthesis of fluorophosphonylated acyclic nucleotide analogues via copper(I)-catalyzed Huisgen 1-3 dipolar cycloaddition.

  Organic & biomolecular chemistry 20091107

• Decomposition of 3'-azido-2',3'-dideoxythymidine 5'-monophosphate (AZTMP) prodrugs in biological media studied by on-line solid-phase extraction coupled to liquid chromatography mass spectrometry.

  Biomedical chromatography : BMC 20091101

• Increasing the coverage of a metapopulation consensus genome by iterative read mapping and assembly.

  Bioinformatics (Oxford, England) 20091101

• Novel desosaminyl derivatives of dihydrochalcomycin from a genetically engineered strain of Streptomyces sp.

  Biotechnology letters 20091101

• Unsaturated dideoxy fluoro-ketopyranosyl nucleosides as new cytostatic agents: a convenient synthesis of 2,6-dideoxy-3-fluoro-4-keto-beta-D-glucopyranosyl analogues of uracil, 5-fluorouracil, thymine, N4-benzoyl cytosine and N6-benzoyl adenine.

  European journal of medicinal chemistry 20091101

• Fam83h is associated with intracellular vesicles and ADHCAI.

  Journal of dental research 20091101

• Etched succinate-functionalized silica hydride stationary phase for open-tubular CEC.

  Electrophoresis 20091101

• 5,6-Dihydrothymine impairs the base excision repair pathway of a closely opposed AP site or single-strand break.

  Radiation research 20091101

• Sources of extracellular, oxidatively-modified DNA lesions: implications for their measurement in urine.

  Journal of clinical biochemistry and nutrition 20091101

• Adsorption of nucleic acid bases and amino acids on single-walled carbon and boron nitride nanotubes: a first-principles study.

  Journal of nanoscience and nanotechnology 20091101

• Intersystem crossing and characterization of dark states in the pyrimidine nucleobases uracil, thymine, and 1-methylthymine.

  The journal of physical chemistry. A 20091029

• Initial excited-state structural dynamics of uracil from resonance Raman spectroscopy are different from those of thymine (5-methyluracil).

  The journal of physical chemistry. B 20091029

• Ab initio study of the structural, tautomeric, pairing, and electronic properties of seleno-derivatives of thymine.

  The journal of physical chemistry. B 20091029

• Excited states decay of the A-T DNA: A PCM/TD-DFT study in aqueous solution of the (9-methyl-adenine)(2).(1-methyl-thymine)(2) stacked tetramer.

  Journal of the American Chemical Society 20091028

• Supramolecular aggregation of functionalized carbon nanotubes.

  Chemical communications (Cambridge, England) 20091028

• The cis-(5R,6S)-thymine glycol lesion occupies the wobble position when mismatched with deoxyguanosine in DNA.

  Biochemistry 20091020

• Acceleration of 5-methylcytosine deamination in cyclobutane dimers by G and its implications for UV-induced C-to-T mutation hotspots.

  Journal of molecular biology 20091009

• Oxidatively damaged nucleobases in duplex DNA oligomers: reaction at thymine-thymine mispairs.

  Journal of the American Chemical Society 20091007

• An ultrasensitive electrochemical 'turn-on' label-free biosensor for Hg2+with AuNP-functionalized reporter DNA as a signal amplifier.

  Chemical communications (Cambridge, England) 20091007

• Design of pyrimidine-based photoresponsive surfaces and light-regulated wettability.

  Langmuir : the ACS journal of surfaces and colloids 20091006

• Biological consequences of potential repair intermediates of clustered base damage site in Escherichia coli.

  Mutation research 20091002

• Interleukin-2 -330 and 166 gene polymorphisms in relation to aggressive or chronic periodontitis and the presence of periodontopathic bacteria.

  Journal of periodontal research 20091001

• DNA methylation and methyl-CpG binding proteins: developmental requirements and function.

  Chromosoma 20091001

• Hereditary vitamin D resistant rickets: identification of a novel splice site mutation in the vitamin D receptor gene and successful treatment with oral calcium therapy.

  Bone 20091001

• Metabolic control analysis in a cellular model of elevated MAO-B: relevance to Parkinson's disease.

  Neurotoxicity research 20091001

• Analysis of mutations in TP53, APC, K-ras, and DCC genes in the non-dysplastic mucosa of patients with inflammatory bowel disease.

  International journal of colorectal disease 20091001

• Changes in the conformation of the Vsr endonuclease amino-terminal domain accompany DNA cleavage.

  Journal of biochemistry 20091001

• Synthesis and NMR properties of derivatives of 5,6-dihydroborauracil and 5,6-dihydroborathymine.

  Bioorganic chemistry 20091001

• Identification of genes related to germination in aged maize seed by screening natural variability.

  Journal of experimental botany 20091001

• Analysis of the mouse mutant Cloth-ears shows a role for the voltage-gated sodium channel Scn8a in peripheral neural hearing loss.

  Genes, brain, and behavior 20091001

• Repair of O6-methylguanine to guanine by cysteine in the absence and presence of histidine and by cysteine thiolate anion: a quantum chemical study.

  Physical chemistry chemical physics : PCCP 20091001

• Interleukin-1 gene cluster polymorphisms associated with periodontal disease in type 2 diabetes.

  Journal of periodontology 20091001

• Compensatory evolution of gene regulation in response to stress by Escherichia coli lacking RpoS.

  PLoS genetics 20091001

• Further evidence for an association between mandibular height and the growth hormone receptor gene in a Japanese population.

  American journal of orthodontics and dentofacial orthopedics : official publication of the American Association of Orthodontists, its constituent societies, and the American Board of Orthodontics 20091001

• A novel mechanism of transposon-mediated gene activation.

  PLoS genetics 20091001

• Gold nanoparticle based surface-enhanced Raman scattering spectroscopy of cancerous and normal nasopharyngeal tissues under near-infrared laser excitation.

  Applied spectroscopy 20091001

• Mechanical strength of 17,134 model proteins and cysteine slipknots.

  PLoS computational biology 20091001

• [Isolation and identification of a Staphylococcus aureus small colony variants].

  Wei sheng wu xue bao = Acta microbiologica Sinica 20091001

• Probing differential Ag+-nucleobase interactions with isothermal titration calorimetry (ITC): Towards patterned DNA metallization.

  Nanoscale 20091001

• Achievements and peculiarities in studies of ancient DNA and DNA from complicated forensic specimens.

  Acta naturae 20091001

• Deamination of 5-methylcytosine residues in Mammalian cells.

  Acta naturae 20091001

• Red-shifted hydrogen bonds and blue-shifted van der Waals contact in the standard Watson-Crick adenine-thymine base pair.

  The journal of physical chemistry. A 20090924

• Photophysics of the pi,pi* and n,pi* states of thymine: MS-CASPT2 minimum-energy paths and CASSCF on-the-fly dynamics.

  The journal of physical chemistry. A 20090924

• Discrimination of single base substitutions in a DNA strand immobilized in a biological nanopore.

  ACS nano 20090922

• Perturbative triples correction for the equation-of-motion coupled-cluster wave functions with single and double substitutions for ionized states: Theory, implementation, and examples.

  The Journal of chemical physics 20090921

• Formamide as a denaturant for bisulfite conversion of genomic DNA: Bisulfite sequencing of the GSTPi and RARbeta2 genes of 43 formalin-fixed paraffin-embedded prostate cancer specimens.

  Analytical biochemistry 20090915

• Comparative photochemistry of animal type 1 and type 4 cryptochromes.

  Biochemistry 20090915

• Highly sensitive electrochemical sensor for mercury(II) ions by using a mercury-specific oligonucleotide probe and gold nanoparticle-based amplification.

  Analytical chemistry 20090915

• Layer-by-layer self-assembly of modified hyaluronic acid/chitosan based on hydrogen bonding.

  Biomacromolecules 20090914

• Excited states of DNA base pairs using long-range corrected time-dependent density functional theory.

  The journal of physical chemistry. A 20090910

• Unique tautomeric and recognition properties of thioketothymines?

  Journal of the American Chemical Society 20090909

• Pairing geometry of the hydrophobic thymine analogue 2,4-difluorotoluene in duplex DNA as analyzed by X-ray crystallography.

  Journal of the American Chemical Society 20090909

• Structures of native human thymidine phosphorylase and in complex with 5-iodouracil.

  Biochemical and biophysical research communications 20090904

• The dihydrouracil/uracil ratio in plasma, clinical and genetic analysis for screening of dihydropyrimidine dehydrogenase deficiency in colorectal cancer patients treated with 5-fluorouracil.

  Pathologie-biologie 20090901

• Interactions of the 'piano-stool' [ruthenium(II) (eta6-arene)(en)CL]+ complexes with water and nucleobases; ab initio and DFT study.

  Journal of computational chemistry 20090901

• Thickness and microhardness of deciduous tooth enamel with known DLX3 mutation.

  Archives of oral biology 20090901

• Electrospray ionization tandem mass spectrometric characteristics of d4T H-phosphonate and distamycin conjugates.

  Rapid communications in mass spectrometry : RCM 20090901

• Effects of halogen substitution on Watson-Crick base pairing: a possible mechanism for radiosensitivity.

  Bioorganic & medicinal chemistry letters 20090901

• A synonymous genetic alteration of LMX1B in a family with nail-patella syndrome.

  The Korean journal of internal medicine 20090901

• Formylpeptide receptor single nucleotide polymorphism 348T>C and its relationship to polymorphonuclear leukocyte chemotaxis in aggressive periodontitis.

  Journal of periodontology 20090901

• Association between Genetic Polymorphism of Multidrug Resistance 1 Gene and Sasang Constitutions.

  Evidence-based complementary and alternative medicine : eCAM 20090901

• Novel RUNX2 mutations in Chinese individuals with cleidocranial dysplasia.

  Journal of dental research 20090901

• A marine sulfate-reducing bacterium producing multiple antibiotics: biological and chemical investigation.

  Marine drugs 20090901

• Coding region of IRF6 gene may not be causal for Van der Woude syndrome in cases from India.

  The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association 20090901

• [Mutation of NKX2-5 gene in patients with atrial septal defect].

  Zhonghua er ke za zhi = Chinese journal of pediatrics 20090901

• Stability of the valence anion of cytosine is governed by nucleobases sequence in the double stranded DNA pi-stack: A computational study.

  The Journal of chemical physics 20090828

• Origin of pyrimidine deoxyribonucleotide pools in perfused rat heart: implications for 3'-azido-3'-deoxythymidine-dependent cardiotoxicity.

  The Biochemical journal 20090827

• Fishing in the (deoxyribonucleotide) pool.

  The Biochemical journal 20090827

• A rare nucleotide base tautomer in the structure of an asymmetric DNA junction.

  Biochemistry 20090825

• Comparision of succinate- and phthalate-functionalized etched silica hydride phases for open-tubular capillary electrochromatography.

  Journal of chromatography. A 20090821

• Templated synthesis of peptide nucleic acids via sequence-selective base-filling reactions.

  Journal of the American Chemical Society 20090819

• Thymine hydroperoxide as a potential source of singlet molecular oxygen in DNA.

  Free radical biology & medicine 20090815

• Highly sensitive fluorescent sensor for mercury ion based on photoinduced charge transfer between fluorophore and pi-stacked T-Hg(II)-T base pairs.

  Talanta 20090815

• A study of pyrimidine base damage in relation to oxidative stress and cancer.

  British journal of cancer 20090804

• Flexible heteroarotinoid (Flex-Het) SHetA2 inhibits angiogenesis in vitro and in vivo.

  Investigational new drugs 20090801

• HERG-F463L potassium channels linked to long QT syndrome reduce I(Kr) current by a trafficking-deficient mechanism.

  Clinical and experimental pharmacology & physiology 20090801

• Reinvestigation of the molecular influence of hypoxanthine on the DNA cleavage efficiency of restriction endonucleases BglII, EcoRI and BamHI.

  Journal of biochemistry 20090801

• Altered expression of the human base excision repair gene NTH1 in gastric cancer.

  Carcinogenesis 20090801

• Comparative analysis of solar radiation-induced cellular damage between ex vivo porcine skin organ culture and in vitro reconstructed human epidermis.

  International journal of cosmetic science 20090801

• Abstracts of the 2008 ISSOL Meeting. August 24-29, 2008. Florence, Italy.

  Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life 20090801

• A miniature condition in Brahman cattle is associated with a single nucleotide mutation within the growth hormone gene.

  Domestic animal endocrinology 20090801

• Pathological replication in cells lacking RecG DNA translocase.

  Molecular microbiology 20090801

• Quantitative structure-activity relationship study on the anti-HIV-1 activity of novel 6-naphthylthio HEPT analogs.

  Chemical biology & drug design 20090801

• Oxygen and guanine-cytosine profiles in marine environments.

  Journal of molecular evolution 20090801

• Risk factors for perioperative adverse events in children with myotonic dystrophy.

  Paediatric anaesthesia 20090801

• Lack of DNA polymerase theta (POLQ) radiosensitizes bone marrow stromal cells in vitro and increases reticulocyte micronuclei after total-body irradiation.

  Radiation research 20090801

• Radiation metabolomics. 3. Biomarker discovery in the urine of gamma-irradiated rats using a simplified metabolomics protocol of gas chromatography-mass spectrometry combined with random forests machine learning algorithm.

  Radiation research 20090801

• Inhibition of P2X receptor-mediated inward current by protein kinase C in small-diameter dorsal root ganglion neurons of adult rats.

  Neuroscience bulletin 20090801

• Prolonged cell cycle response of HeLa cells to low-level alkylation exposure.

  Cancer research 20090801

• Computational study of khellin excited states and photobinding to DNA.

  Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 20090801

• CpG methylation controls reactivation of HIV from latency.

  PLoS pathogens 20090801

• Association between IRF6 SNPs and oral clefts in West China.

  Journal of dental research 20090801

• Chemical composition and antimicrobial activity of wild garlic Allium ursinum of Bulgarian origin.

  Natural product communications 20090801

• Validated high-performance liquid chromatographic technique for determination of 5-fluorouracil: applications to stability studies and simulated colonic media.

  Journal of chromatographic science 20090801

• Partial lipodystrophy and insulin resistant diabetes in a patient with a homozygous nonsense mutation in CIDEC.

  EMBO molecular medicine 20090801

• Alcohol and breast cancer: the mechanisms explained.

  Journal of clinical medicine research 20090801

• Cyanide, peroxide and nitric oxide formation in solutions of hydroxyurea causes cellular toxicity and may contribute to its therapeutic potency.

  Journal of molecular biology 20090731

• Theoretical studies on the thermodynamics and kinetics of the N-glycosidic bond cleavage in deoxythymidine glycol.

  The journal of physical chemistry. B 20090730

• Peptide-nucleic acids (PNAs) with pyrimido[4,5-d]pyrimidine-2,4,5,7-(1H,3H,6H,8H)-tetraone (PPT) as a universal base: their synthesis and binding affinity for oligodeoxyribonucleotides.

  Organic & biomolecular chemistry 20090721

• Fingerprints of bonding motifs in DNA duplexes of adenine and thymine revealed from circular dichroism: synchrotron radiation experiments and TDDFT calculations.

  The journal of physical chemistry. B 20090716

• Preparation of genome-wide DNA fragment libraries using bisulfite in polyacrylamide gel electrophoresis slices with formamide denaturation and quality control for massively parallel sequencing by oligonucleotide ligation and detection.

  Analytical biochemistry 20090715

• Electrochemical sensing and biosensing platform based on chemically reduced graphene oxide.

  Analytical chemistry 20090715

• Automated nucleic acids isolation using paramagnetic microparticles coupled with electrochemical detection.

  Talanta 20090715

• Replication across template T/U by human DNA polymerase-iota.

  Structure (London, England : 1993) 20090715

• Unusual DNA-DNA cross-links between a photolyase deoxyribozyme, UV1C, and its bound oligonucleotide substrate.

  Biochemistry 20090714

• Effects of hydration on the proton transfer mechanism in the adenine-thymine base pair.

  The journal of physical chemistry. A 20090709

• Purification and characterization of Caenorhabditis elegans NTH, a homolog of human endonuclease III: essential role of N-terminal region.

  DNA repair 20090704

• FANCJ helicase uniquely senses oxidative base damage in either strand of duplex DNA and is stimulated by replication protein A to unwind the damaged DNA substrate in a strand-specific manner.

  The Journal of biological chemistry 20090703

• Synthesis and electrochemical evaluation of conjugates between 2'-deoxyadenosine and modified anthraquinone: probes for hole-transfer studies in DNA.

  The Journal of organic chemistry 20090703

• New mutation of the patched homologue 1 gene in a Chinese family with naevoid basal cell carcinoma syndrome.

  The British journal of oral & maxillofacial surgery 20090701

• A density functional theory (DFT) study on gas-phase proton transfer reactions of derivatized and underivatized peptide ions generated by matrix-assisted laser desorption ionization.

  Journal of the American Society for Mass Spectrometry 20090701

• Clinical and microstructural aberrations of enamel of deciduous and permanent teeth in patients with autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy.

  Archives of oral biology 20090701

• A functional analysis of the pyrimidine catabolic pathway in Arabidopsis.

  The New phytologist 20090701

• Catalytically impaired hMYH and NEIL1 mutant proteins identified in patients with primary sclerosing cholangitis and cholangiocarcinoma.

  Carcinogenesis 20090701

• Processing of thymine glycol in a clustered DNA damage site: mutagenic or cytotoxic.

  Nucleic acids research 20090701

• Tandem mass spectrometry-based detection of c4'-oxidized abasic sites at specific positions in DNA fragments.

  Chemical research in toxicology 20090701

• Discrimination of base differences in oligonucleotides using mid-infrared spectroscopy and multivariate analysis.

  Analytical chemistry 20090701

• Fine-structured multi-scaling long-range correlations in completely sequenced genomes--features, origin, and classification.

  European biophysics journal : EBJ 20090701

• Adventitia removal does not modify the alphaID-adrenoceptors response in aorta during hypertension and ageing.

  Autonomic & autacoid pharmacology 20090701

• AZT 5'-triphosphate nanoformulation suppresses human immunodeficiency virus type 1 replication in peripheral blood mononuclear cells.

  Journal of neurovirology 20090701

• Transcriptional mutagenesis induced by 8-oxoguanine in mammalian cells.

  PLoS genetics 20090701

• Organic analysis of peridotite rocks from the Ashadze and Logatchev hydrothermal sites.

  International journal of molecular sciences 20090701

• [The study on linear relationship between concentration and surface-enhanced Raman spectroscopy (SERS) signal of thymine in improved Ag sol].

  Guang pu xue yu guang pu fen xi = Guang pu 20090701

• Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.

  Molecular cell 20090626

• Hydrogen bonding between adenine-modified surfaces and terminal thymine-functionalized polystyrene: influence of the surface adenine concentration on polymer recognition.

  Langmuir : the ACS journal of surfaces and colloids 20090616

• The mismatch repair and base excision repair pathways: an opportunity for individualized (personalized) sensitization of cancer therapy.

  Cancer biology & therapy 20090615

• Predicting and understanding the stability of G-quadruplexes.

  Bioinformatics (Oxford, England) 20090615

• Conformationally controlled, thymine-based alpha-nucleopeptides.

  Chemical communications (Cambridge, England) 20090614

• Synthesis and characterisation of hetero-bimetallic organometallic phenylalanine and PNA monomer derivatives.

  Dalton transactions (Cambridge, England : 2003) 20090614

• Uracil as nucleating agent for bacterial poly[(3-hydroxybutyrate)-co-(3-hydroxyhexanoate)] copolymers.

  Macromolecular bioscience 20090611

• Doubly loaded cycloSaligenyl-pronucleotides - 5,5'-Bis-(cycloSaligenyl-2',3'-dideoxy-2',3'-didehydrothymidine monophosphates).

  Journal of medicinal chemistry 20090611

• Synthesis and hybridization studies of alpha-configured arabino nucleic acids.

  Organic & biomolecular chemistry 20090607

• The alkyltransferase-like ybaZ gene product enhances nucleotide excision repair of O(6)-alkylguanine adducts in E. coli.

  DNA repair 20090604

• Structural basis of error-prone replication and stalling at a thymine base by human DNA polymerase iota.

  The EMBO journal 20090603

• Fetal Hemoglobin Inducers from the Natural World: A Novel Approach for Identification of Drugs for the Treatment of {beta}-Thalassemia and Sickle-Cell Anemia.

  Evidence-based complementary and alternative medicine : eCAM 20090601

• Design of laser pulses for selective vibrational excitation of the N6-H bond of adenine and adenine-thymine base pair using optimal control theory.

  Journal of molecular modeling 20090601

• Methylenetetrahydrofolate reductase deficiency and low dietary folate reduce tumorigenesis in Apc min/+ mice.

  Gut 20090601

• Synthesis of new piperazine derived Cu(II)/Zn(II) metal complexes, their DNA binding studies, electrochemistry and anti-microbial activity: validation for specific recognition of Zn(II) complex to DNA helix by interaction with thymine base.

  Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy 20090601

• Activation of iGluR5 kainate receptors inhibits neurogenic dural vasodilatation in an animal model of trigeminovascular activation.

  British journal of pharmacology 20090601

• The interaction of manganese ions with DNA.

  Journal of inorganic biochemistry 20090601

• Modulation of the activity of methyl binding domain protein 4 (MBD4/MED1) while processing iododeoxyuridine generated DNA mispairs.

  Cancer biology & therapy 20090601

• Endothelial nitric oxide synthase gene polymorphisms are not associated with recurrent aphthous stomatitis.

  Archives of oral biology 20090601

• Thymine-protected gold nanoparticles: assembly and disassembly of gold nanoparticles in the presence of Hg2+.

  Journal of nanoscience and nanotechnology 20090601

• Molecular evolutionary consequences of niche restriction in Francisella tularensis, a facultative intracellular pathogen.

  PLoS pathogens 20090601

• High-dose squalene ingestion increases type I procollagen and decreases ultraviolet-induced DNA damage in human skin in vivo but is associated with transient adverse effects.

  Clinical and experimental dermatology 20090601

• Epigenetic regulation of HIV-1 latency by cytosine methylation.

  PLoS pathogens 20090601

• Cell cycle effects and increased adduct formation by temozolomide enhance the effect of cytotoxic and targeted agents in lung cancer cell lines.

  Journal of chemotherapy (Florence, Italy) 20090601

• Application of ionic liquids in high performance reversed-phase chromatography.

  International journal of molecular sciences 20090601

• Precambrian lunar volcanic protolife.

  International journal of molecular sciences 20090601

• Base-pairing mediated non-covalent polymers.

  Chemical Society reviews 20090601

• Chemopreventive effects of sarcophine-diol on ultraviolet B-induced skin tumor development in SKH-1 hairless mice.

  Marine drugs 20090601

• Quintets of uracil and thymine: a novel structure of nucleobase self-assembly studied by electrospray ionization mass spectrometry.

  Chemical communications (Cambridge, England) 20090528

• Thymine relaxation after UV irradiation: the role of tautomerization and pi-sigma* states.

  Physical chemistry chemical physics : PCCP 20090528

• The steric gate amino acid tyrosine 112 is required for efficient mismatched-primer extension by human DNA polymerase kappa.

  Biochemistry 20090526

• Promiscuous usage of nucleotides by the DNA helicase of bacteriophage T7: determinants of nucleotide specificity.

  The Journal of biological chemistry 20090522

• Long-range epigenetic silencing at 2q14.2 affects most human colorectal cancers and may have application as a non-invasive biomarker of disease.

  British journal of cancer 20090519

• Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1.

  Science (New York, N.Y.) 20090515

• Site-specific dynamics in TAT triplex DNA as revealed by time-domain fluorescence of 2-aminopurine.

  The journal of physical chemistry. B 20090514

• Role of nucleobase energetics and nucleobase interactions in single-stranded peptide nucleic acid charge transfer.

  Journal of the American Chemical Society 20090513

• Detection of UVBR-sensitive and -tolerant bacteria in surface waters of the western North Pacific.

  Journal of photochemistry and photobiology. B, Biology 20090504

• Desorption electrospray ionization mass spectrometry of DNA nucleobases: implications for a liquid film model.

  Journal of mass spectrometry : JMS 20090501

• Structural polymorphism of the four-repeat Oxytricha nova telomeric DNA sequences.

  Biophysical chemistry 20090501

• Clinical and microstructural aberrations of enamel of deciduous and permanent teeth in patients with autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy.

  Archives of oral biology 20090501

• The human oxidative DNA glycosylase NEIL1 excises psoralen-induced interstrand DNA cross-links in a three-stranded DNA structure.

  The Journal of biological chemistry 20090501

• Lethal cystic kidney disease in Amish neonates associated with homozygous nonsense mutation of NPHP3.

  American journal of kidney diseases : the official journal of the National Kidney Foundation 20090501

• Highly selective phthalocyanine-thymine conjugate sensor for Hg2+ based on target induced aggregation.

  Analytical chemistry 20090501

• Thr54 allele of fatty-acid binding protein 2 gene is associated with obesity but not type 2 diabetes mellitus in a Caucasian population.

  Diabetes research and clinical practice 20090501

• Cloning and characterization of Rhodotorula glutinis thymine hydroxylase.

  Chemical research in toxicology 20090501

• Parallel RNA-strand recognition by 2'-amino-beta-L-LNA.

  Bioorganic & medicinal chemistry letters 20090501

• Opposite-base dependent excision of 5-formyluracil from DNA by hSMUG1.

  International journal of radiation biology 20090501

• Expression of human uncoupling protein-3 in Drosophila insulin-producing cells increases insulin-like peptide (DILP) levels and shortens lifespan.

  Experimental gerontology 20090501

• SNP-based prediction of the human germ cell methylation landscape.

  Genomics 20090501

• The Base Excision Repair system of Salmonella enterica serovar typhimurium counteracts DNA damage by host nitric oxide.

  PLoS pathogens 20090501

• Synthesis of 3'-o-phosphonoethyl nucleosides with an adenine and a thymine base moiety.

  Nucleosides, nucleotides & nucleic acids 20090501

• Sequence-independent and rapid long-range charge transfer through DNA.

  Nature chemistry 20090501

• A deoxyribozyme, Sero1C, uses light and serotonin to repair diverse pyrimidine dimers in DNA.

  Journal of molecular biology 20090424

• Nonpolar nucleoside mimics as active substrates for human thymidine kinases.

  Journal of the American Chemical Society 20090422

• Elementary lesions in DNA subunits: electron, hydrogen atom, proton, and hydride transfers.

  Accounts of chemical research 20090421

• Glycosylation engineering of spinosyn analogues containing an L-olivose moiety.

  Organic & biomolecular chemistry 20090421

• O(6)-methylguanine-DNA methyltransferase depletion and DNA damage in patients with melanoma treated with temozolomide alone or with lomeguatrib.

  British journal of cancer 20090421

• An unusual mechanism of thymidylate biosynthesis in organisms containing the thyX gene.

  Nature 20090416

• Specific mercury(II) adsorption by thymine-based sorbent.

  Talanta 20090415

• Thymine dimerization in DNA model systems: cyclobutane photolesion is predominantly formed via the singlet channel.

  Journal of the American Chemical Society 20090415

• Antimicrobial resistance induced by genetic changes.

  Journal of medicine and life 20090415

• An analysis of the different behavior of DNA and RNA through the study of the mutual relationship between stacking and hydrogen bonding.

  The journal of physical chemistry. B 20090409

• Langmuir monolayer and Langmuir-Blodgett films formed by a melamine-headed azobenzene-derived amphiphile: interfacial assembly affected by host-guest interaction.

  Langmuir : the ACS journal of surfaces and colloids 20090409

• Synthesis and characterization of dicobalthexacarbonyl-alkyne derivatives of amino acids, peptides, and peptide nucleic acid (PNA) monomers.

  Inorganic chemistry 20090406

• Lichens--photophysical studies of potential new sunscreens.

  Journal of photochemistry and photobiology. B, Biology 20090402

• Solution structure of the Pseudomonas putida protein PpPutA45 and its DNA complex.

  Proteins 20090401

• Benign nodal nevi frequently harbor the activating V600E BRAF mutation.

  The American journal of surgical pathology 20090401

• Ground state intermolecular proton transfer in the supersystems thymine-(H2O)n and thymine-(CH3OH)n, n = 1,2: a theoretical study.

  Journal of molecular modeling 20090401

• Hydrogen bonding versus stacking stabilization by modified nucleobases incorporated in PNA.DNA duplexes.

  Biophysical chemistry 20090401

• (1)H and (13)C NMR assignments of eight nitrogen containing compounds from Nocardia alba sp.nov (YIM 30243(T)).

  Magnetic resonance in chemistry : MRC 20090401

• Dihydropyrimidine dehydrogenase mRNA expression in peripheral blood of rectal cancer patients is significantly associated with residual tumor and distant metastases following resection.

  Journal of surgical oncology 20090401

• Label-free aptamer-based colorimetric detection of mercury ions in aqueous media using unmodified gold nanoparticles as colorimetric probe.

  Analytical and bioanalytical chemistry 20090401

• Molecular analysis of mitochondrial hypervariable region 1 in 394 Japanese individuals.

  Legal medicine (Tokyo, Japan) 20090401

• Caspase-7 activation by the Nlrc4/Ipaf inflammasome restricts Legionella pneumophila infection.

  PLoS pathogens 20090401

• Continuous base identification for single-molecule nanopore DNA sequencing.

  Nature nanotechnology 20090401

• Genetic polymorphisms in CYP3A5 and MDR1 genes and their correlations with plasma levels of tacrolimus and cyclosporine in renal transplant recipients.

  Transplantation proceedings 20090401

• Base excision by thymine DNA glycosylase mediates DNA-directed cytotoxicity of 5-fluorouracil.

  PLoS biology 20090401

• Structural and functional studies of QdtC: an N-acetyltransferase required for the biosynthesis of dTDP-3-acetamido-3,6-dideoxy-alpha-D-glucose.

  Biochemistry 20090331

• Photodamage to isolated mononucleotides--photodissociation spectra and fragment channels.

  Physical chemistry chemical physics : PCCP 20090321

• Additive Pummerer reaction of 3,5-O-(di-tert-butyl)silylene-4-thiofuranoid glycal: a high-yield and beta-selective entry to 4'-thioribonucleosides.

  The Journal of organic chemistry 20090320

• Hydrolytic deamination of 5-methylcytosine in protic medium--a theoretical study.

  The journal of physical chemistry. A 20090319

• Photoinduced nonadiabatic dynamics of pyrimidine nucleobases: on-the-fly surface-hopping study with semiempirical methods.

  The journal of physical chemistry. B 20090319

• Osmium complexation of mismatched DNA: effect of the bases adjacent to mismatched 5-methylcytosine.

  Bioconjugate chemistry 20090318

• The reopening rate of the fingers domain is a determinant of base selectivity for RB69 DNA polymerase.

  Biochemistry 20090317

• Effect of A and B metal ion site occupancy on conformational changes in an RB69 DNA polymerase ternary complex.

  Biochemistry 20090317

• Simultaneous determination of adenine guanine and thymine at multi-walled carbon nanotubes incorporated with poly(new fuchsin) composite film.

  Analytica chimica acta 20090316

• Genotyping of single nucleotide polymorphisms using base-quenched probe: a method does not invariably depend on the deoxyguanosine nucleotide.

  Analytical biochemistry 20090315

• Label-free colorimetric detection of aqueous mercury ion (Hg2+) using Hg2+-modulated G-quadruplex-based DNAzymes.

  Analytical chemistry 20090315

• Functional characterization and substrate specificity of spinosyn rhamnosyltransferase by in vitro reconstitution of spinosyn biosynthetic enzymes.

  The Journal of biological chemistry 20090313

• Biomarker analysis in stage III-IV (M0) gastric cancer patients who received curative surgery followed by adjuvant 5-fluorouracil and cisplatin chemotherapy: epidermal growth factor receptor (EGFR) associated with favourable survival.

  British journal of cancer 20090310

• Reactivity of clerocidin towards adenine: implications for base-modulated DNA damage.

  Organic & biomolecular chemistry 20090307

• Nature of bonding in nine planar hydrogen-bonded adenine...thymine base pairs.

  The journal of physical chemistry. B 20090305

• Soman induces ictogenesis in the amygdala and interictal activity in the hippocampus that are blocked by a GluR5 kainate receptor antagonist in vitro.

  Neuroscience 20090303

• Selectivity in ligand recognition of G-quadruplex loops.

  Biochemistry 20090303

• Blood-brain barrier efflux transport of pyrimidine nucleosides and nucleobases in the rat.

  Neurochemical research 20090301

• Transgenic expression of S100A2 in hairless mouse skin enhances Cxcl13 mRNA in response to solar-simulated radiation.

  Archives of dermatological research 20090301

• Higher efficiency of thymine-adenine clamp-modified single-stranded oligonucleotides in targeted nucleotide sequence correction is not correlated with lower intracellular degradation.

  Human gene therapy 20090301

• Neutrophil formylpeptide receptor single nucleotide polymorphism 348T>C in aggressive periodontitis.

  Journal of periodontology 20090301

• Lack of association between the Glu298Asp polymorphism of endothelial nitric oxide synthase and slow coronary flow in the Turkish population.

  The Canadian journal of cardiology 20090301

• Methylation-dependent binding of the epstein-barr virus BZLF1 protein to viral promoters.

  PLoS pathogens 20090301

• Candidate gene strategy reveals ENAM mutations.

  Journal of dental research 20090301

• Folic acid is a potent chemoattractant of free-living amoebae in a new and amazing species of protist, Vahlkampfia sp.

  Zoological science 20090301

• Adverse effects of a clinically relevant dose of hydroxyurea used for the treatment of sickle cell disease on male fertility endpoints.

  International journal of environmental research and public health 20090301

• Molecular pathophysiology of renal tubular acidosis.

  Current genomics 20090301

• Identification of known and novel PTCH mutations in both syndromic and non-syndromic keratocystic odontogenic tumors.

  International journal of oral science 20090301

• Spore photoproduct lyase catalyzes specific repair of the 5R but not the 5S spore photoproduct.

  Journal of the American Chemical Society 20090225

• Structural analysis of QdtB, an aminotransferase required for the biosynthesis of dTDP-3-acetamido-3,6-dideoxy-alpha-D-glucose.

  Biochemistry 20090224

• N2'-->p3' phosphoramidate glycerol nucleic acid as a potential alternative genetic system.

  Journal of the American Chemical Society 20090218

• Extending thymidine kinase activity to the catalytic repertoire of human deoxycytidine kinase.

  Biochemistry 20090217

• Determining the conservation of DNA methylation in Arabidopsis.

  Epigenetics 20090216

• Molecular recognition of a thymine bulge by a high affinity, deazaguanine-based hydrogen-bonding ligand.

  Chemical communications (Cambridge, England) 20090214

• Structures of hydrated Li+-thymine and Li+-uracil complexes by IRMPD spectroscopy in the N-H/O-H stretching region.

  The journal of physical chemistry. A 20090205

• Small-molecule binding at an abasic site of DNA: strong binding of lumiflavin for improved recognition of thymine-related single nucleotide polymorphisms.

  The journal of physical chemistry. B 20090205

• A QM/MM investigation of thymine dimer radical anion splitting catalyzed by DNA photolyase.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20090202

• Fluorescence-amplifying assay for irradiated DNA lesions using water-soluble conjugated polymers.

  Macromolecular rapid communications 20090202

• Simultaneous recognition of nucleobase and sites of DNA damage: effect of tethered cation on the binding affinity.

  Biochimica et biophysica acta 20090201

• Genetic basis of inter- and intrastrain differences in diazepam p-hydroxylation in rats.

  Drug metabolism and disposition: the biological fate of chemicals 20090201

• E-selectin and L-selectin polymorphisms in patients with periodontitis.

  Journal of periodontal research 20090201

• The temporal dynamics of slightly deleterious mutations in Escherichia coli and Shigella spp.

  Molecular biology and evolution 20090201

• Epigenetic mechanisms in mammals.

  Cellular and molecular life sciences : CMLS 20090201

• Nonparametric comparison of two survival functions with dependent censoring via nonparametric multiple imputation.

  Statistics in medicine 20090201

• 5'-O-Aliphatic and amino acid ester prodrugs of (-)-beta-D-(2R,4R)-dioxolane-thymine (DOT): synthesis, anti-HIV activity, cytotoxicity and stability studies.

  Bioorganic & medicinal chemistry 20090201

• Unchanged thymidine triphosphate pools and thymidine metabolism in two lines of thymidine kinase 2-mutated fibroblasts.

  The FEBS journal 20090201

• Structure-function studies of the RNA polymerase II elongation complex.

  Acta crystallographica. Section D, Biological crystallography 20090201

• Analysis of the association of IL1B (C+3954T) and IL1RN (intron 2) polymorphisms with dental implant loss in a Brazilian population.

  Clinical oral implants research 20090201

• Adaptations to submarine hydrothermal environments exemplified by the genome of Nautilia profundicola.

  PLoS genetics 20090201

• 2-Deoxy-D-ribose, a downstream mediator of thymidine phosphorylase, regulates tumor angiogenesis and progression.

  Anti-cancer agents in medicinal chemistry 20090201

• Enhancement of the seed-target recognition step in RNA silencing by a PIWI/MID domain protein.

  Molecular cell 20090130

• Absorption and fluorescence emission spectroscopic characters of size-expanded yDNA bases and effect of deoxyribose and base pairing.

  The journal of physical chemistry. B 20090129

• Temozolomide- and fotemustine-induced apoptosis in human malignant melanoma cells: response related to MGMT, MMR, DSBs, and p53.

  British journal of cancer 20090127

• DNA at aqueous/solid interfaces: chirality-based detection via second harmonic generation activity.

  Journal of the American Chemical Society 20090121

• Reversible molecular switching of molecular beacon: controlling DNA hybridization kinetics and thermodynamics using mercury(ii) ions.

  Chemical communications (Cambridge, England) 20090121

• Keeping uracil out of DNA: physiological role, structure and catalytic mechanism of dUTPases.

  Accounts of chemical research 20090120

• Design of Heterocomplementary H-Bonding RAFT Agents - Towards the Generation of Supramolecular Star Polymers.

  Macromolecular rapid communications 20090116

• Electronic structure of DNA--unique properties of 8-oxoguanosine.

  Journal of the American Chemical Society 20090114

• Structure of the nucleotide radical formed during reaction of CDP/TTP with the E441Q-alpha2beta2 of E. coli ribonucleotide reductase.

  Journal of the American Chemical Society 20090114

• Subunit-dependent postsynaptic expression of kainate receptors on hippocampal interneurons in area CA1.

  The Journal of neuroscience : the official journal of the Society for Neuroscience 20090114

• Binding of DNA nucleobases and nucleosides with graphene.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20090112

• New uracil dimers showing erythroid differentiation inducing activities.

  Journal of medicinal chemistry 20090108

• Energetic and hydration contributions of the removal of methyl groups from thymine to form uracil in G-quadruplexes.

  The journal of physical chemistry. B 20090108

• Highly sensitive and selective detection of mercury ions by using oligonucleotides, DNA intercalators, and conjugated polymers.

  Langmuir : the ACS journal of surfaces and colloids 20090106

• Common 677C-->T mutation of the 5,10-methylenetetrahydrofolate reductase gene affects follicular estradiol synthesis.

  Fertility and sterility 20090101

• Photosensitizing properties of triplet beta-lapachones in acetonitrile solution.

  Photochemistry and photobiology 20090101

• Antagonism of recombinant and native GluK3-containing kainate receptors.

  Neuropharmacology 20090101

• The carcinogenic air pollutant 3-nitrobenzanthrone induces GC to TA transversion mutations in human p53 sequences.

  Mutagenesis 20090101

• MTHFR C677T polymorphism and risk of HCC in patients with liver cirrhosis: role of male gender and alcohol consumption.

  Alcoholism, clinical and experimental research 20090101

• Sequence-dependence and prediction of nucleotide solvent accessibility in double stranded DNA.

  Gene 20090101

• Effect of methyl substitution in a ligand on the selectivity and binding affinity for a nucleobase: a case study with isoxanthopterin and its derivatives.

  Bioorganic & medicinal chemistry 20090101

• Novel mutations in the SH3BP2 gene associated with sporadic central giant cell lesions and cherubism.

  Oral diseases 20090101

• Electrospray-ionization mass spectrometry for screening the specificity and stability of single-stranded-DNA templated self-assemblies.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20090101

• Fabrication and functionalization of supramolecular microgel arrays through complementary hydrogen-bonding interactions.

  Small (Weinheim an der Bergstrasse, Germany) 20090101

• Postmortem miscoding lesions in sequence analysis of human ancient mitochondrial DNA.

  Journal of molecular evolution 20090101

• Detection of DNA damage: effect of thymidine glycol residues on the thermodynamic, substrate and interfacial acoustic properties of oligonucleotide duplexes.

  The Analyst 20090101

• Mass spectrometry studies of the binding of the minor groove-directed alkylating agent alkamin to AT-tract oligonucleotides.

  Chemical research in toxicology 20090101

• A fluorescent bisanthracene macrocycle discriminates between matched and mismatch-containing DNA.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20090101

• An unusual helix turn helix motif in the catalytic core of HIV-1 integrase binds viral DNA and LEDGF.

  PloS one 20090101

• In-vitro helix opening of M. tuberculosis oriC by DnaA occurs at precise location and is inhibited by IciA like protein.

  PloS one 20090101

• A novel mutation in the DSPP gene associated with dentinogenesis imperfecta type II.

  Journal of dental research 20090101

• Germ warfare in a microbial mat community: CRISPRs provide insights into the co-evolution of host and viral genomes.

  PloS one 20090101

• Iron behaving badly: inappropriate iron chelation as a major contributor to the aetiology of vascular and other progressive inflammatory and degenerative diseases.

  BMC medical genomics 20090101

• Polymorphisms of the methylenetetrahydrofolate reductase, vascular endothelial growth factor, endothelial nitric oxide synthase, monocyte chemoattractant protein-1 and apolipoprotein E genes are not associated with carotid intima-media thickness.

  The Canadian journal of cardiology 20090101

• Large-scale inference of the point mutational spectrum in human segmental duplications.

  BMC genomics 20090101

• The taxonomic status of the endangered thin-spined porcupine, Chaetomys subspinosus (Olfers, 1818), based on molecular and karyologic data.

  BMC evolutionary biology 20090101

• Optimized ancestral state reconstruction using Sankoff parsimony.

  BMC bioinformatics 20090101

• Analysis of growth-phase regulated genes in Streptococcus agalactiae by global transcript profiling.

  BMC microbiology 20090101

• Evidence for co-evolution between human microRNAs and Alu-repeats.

  PloS one 20090101

• High quality copy number and genotype data from FFPE samples using Molecular Inversion Probe (MIP) microarrays.

  BMC medical genomics 20090101

• Genetic correction of splice site mutation in purified and enriched myoblasts isolated from mdx5cv mice.

  BMC molecular biology 20090101

• Aberrant epigenetic silencing is triggered by a transient reduction in gene expression.

  PloS one 20090101

• The complete mitochondrial genome of the house dust mite Dermatophagoides pteronyssinus (Trouessart): a novel gene arrangement among arthropods.

  BMC genomics 20090101

• Is the new primate genus rungwecebus a baboon?

  PloS one 20090101

• Enzymatic primer-extension with glycerol-nucleoside triphosphates on DNA templates.

  PloS one 20090101

• Polymerase-catalysed incorporation of glucose nucleotides into a DNA duplex.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20090101

• Autosomal-dominant cerulean cataract in a chinese family associated with gene conversion mutation in beta-B2-crystallin.

  Ophthalmic research 20090101

• Multifactor dimensionality reduction analysis identifies specific nucleotide patterns promoting genetic polymorphisms.

  BioData mining 20090101

• Mapping eGFP oligomer mobility in living cell nuclei.

  PloS one 20090101

• A hypomorphic vasopressin allele prevents anxiety-related behavior.

  PloS one 20090101

• Bioinformatics analysis suggests base modifications of tRNAs and miRNAs in Arabidopsis thaliana.

  BMC genomics 20090101

• [Polymethylene derivatives of nucleic bases with omega-functional groups: VII. Cytotoxicity in the series of N-(2-oxocyclohexyl)-omega-oxoalkyl substituted purines and pyrimidines].

  Bioorganicheskaia khimiia 20090101

• The use of diethyl pyrocarbonate and potassium permanganate as probes for strand separation and structural distortions in DNA.

  Methods in molecular biology (Clifton, N.J.) 20090101

• The p53HMM algorithm: using profile hidden markov models to detect p53-responsive genes.

  BMC bioinformatics 20090101

• [Characteristic vibration analysis of M-RNA nucleic acid bases complexes (M = Ca+ and Mg+) by DFT].

  Guang pu xue yu guang pu fen xi = Guang pu 20090101

• Small local variations in B-form DNA lead to a large variety of global geometries which can accommodate most DNA-binding protein motifs.

  BMC structural biology 20090101

• The mitochondrial DNA T16189C polymorphism and HIV-associated cardiomyopathy: a genotype-phenotype association study.

  BMC medical genetics 20090101

• Stochastic analysis of the SOS response in Escherichia coli.

  PloS one 20090101

• Prediction of mono- and di-nucleotide-specific DNA-binding sites in proteins using neural networks.

  BMC structural biology 20090101

• Source gene composition and gene conversion of the AluYh and AluYi lineages of retrotransposons.

  BMC evolutionary biology 20090101

• A comparative approach to elucidate chloroplast genome replication.

  BMC genomics 20090101

• Loss of heterozygosity at thymidylate synthase locus in Barrett's metaplasia, dysplasia, and carcinoma sequences.

  BMC cancer 20090101

• Organization and evolution of two SIDER retroposon subfamilies and their impact on the Leishmania genome.

  BMC genomics 20090101

• Temozolomide and cisplatin in relapsed/refractory acute leukemia.

  Journal of hematology & oncology 20090101

• Dazl functions in maintenance of pluripotency and genetic and epigenetic programs of differentiation in mouse primordial germ cells in vivo and in vitro.

  PloS one 20090101

• Measure of synonymous codon usage diversity among genes in bacteria.

  BMC bioinformatics 20090101

• SHMT1 and SHMT2 are functionally redundant in nuclear de novo thymidylate biosynthesis.

  PloS one 20090101

• Insights into the role of Val45 and Gln182 of Escherichia coli MutY in DNA substrate binding and specificity.

  BMC biochemistry 20090101

• Mutation spectrum of CYP1B1 in North Indian congenital glaucoma patients.

  Molecular vision 20090101

• Genotyping human ancient mtDNA control and coding region polymorphisms with a multiplexed Single-Base-Extension assay: the singular maternal history of the Tyrolean Iceman.

  BMC genetics 20090101

• Effect of Fuzheng Huayu formula and its actions against liver fibrosis.

  Chinese medicine 20090101

• Expression of the peroxisome proliferator activated receptor gamma gene is repressed by DNA methylation in visceral adipose tissue of mouse models of diabetes.

  BMC biology 20090101

• Base flipping in tn10 transposition: an active flip and capture mechanism.

  PloS one 20090101

• Experimental evidence indicating that mastreviruses probably did not co-diverge with their hosts.

  Virology journal 20090101

• Mutations in STK11 gene in Czech Peutz-Jeghers patients.

  BMC medical genetics 20090101

• Virus-host coevolution: common patterns of nucleotide motif usage in Flaviviridae and their hosts.

  PloS one 20090101

• The first cellular models based on frataxin missense mutations that reproduce spontaneously the defects associated with Friedreich ataxia.

  PloS one 20090101

• BSMAP: whole genome bisulfite sequence MAPping program.

  BMC bioinformatics 20090101

• Manganese and extracellular superoxide dismutase polymorphisms and risk for asbestosis.

  Journal of biomedicine & biotechnology 20090101

• Assessment of the effect of betaine on p16 and c-myc DNA methylation and mRNA expression in a chemical induced rat liver cancer model.

  BMC cancer 20090101

• Primer fabrication using polymerase mediated oligonucleotide synthesis.

  BMC genomics 20090101

• Resolution of joint molecules by RuvABC and RecG following cleavage of the Escherichia coli chromosome by EcoKI.

  PloS one 20090101

• Active DNA demethylation mediated by DNA glycosylases.

  Annual review of genetics 20090101

• Phylogeny and mitochondrial gene order variation in Lophotrochozoa in the light of new mitogenomic data from Nemertea.

  BMC genomics 20090101

• Polymorphisms of XRCC1 gene and risk of gastric cardiac adenocarcinoma.

  Diseases of the esophagus : official journal of the International Society for Diseases of the Esophagus 20090101

• Improved base calling for the Illumina Genome Analyzer using machine learning strategies.

  Genome biology 20090101

• Persistent circulating unmetabolised folic acid in a setting of liberal voluntary folic acid fortification. Implications for further mandatory fortification?

  BMC public health 20090101

• Gene polymorphisms in APOE, NOS3, and LIPC genes may be risk factors for cardiac adverse events after primary CABG.

  Journal of cardiothoracic surgery 20090101

• On the origin of life in the zinc world: 1. Photosynthesizing, porous edifices built of hydrothermally precipitated zinc sulfide as cradles of life on Earth.

  Biology direct 20090101

• Structural analysis of polarizing indels: an emerging consensus on the root of the tree of life.

  Biology direct 20090101

• Empirical relationship between intra-purine and intra-pyrimidine differences in conserved gene sequences.

  PloS one 20090101

• The prevalence of uridine diphosphate-glucuronosyltransferase 1A9 (UGT1A9) gene promoter region single-nucleotide polymorphisms T-275A and C-2152T and its influence on mycophenolic acid pharmacokinetics in stable renal transplant patients.

  Transplantation proceedings 20090101

• Transitions at CpG dinucleotides, geographic clustering of TP53 mutations and food availability patterns in colorectal cancer.

  PloS one 20090101

• Insulin gene expression is regulated by DNA methylation.

  PloS one 20090101

• Comparative proteomic analysis of the PhoP regulon in Salmonella enterica serovar Typhi versus Typhimurium.

  PloS one 20090101

• One-electron oxidation of DNA: mechanism and consequences.

  Nucleic acids symposium series (2004) 20090101

• Evaluation of base recognition abilities of 2'-deoxynucleoside N-oxide derivatives by polymerase reactions.

  Nucleic acids symposium series (2004) 20090101

• Osmium complex binding to mismatched methylcytosine: effect of adjacent bases.

  Nucleic acids symposium series (2004) 20090101

• Fluorescence detection of the endonuclease III reaction using modified oligonucleotides.

  Nucleic acids symposium series (2004) 20090101

• Recognition and reaction mechanisms of the (6-4) photolyase as determined by using a (6-4) photoproduct analog.

  Nucleic acids symposium series (2004) 20090101

• Rational design of improved pharmabiotics.

  Journal of biomedicine & biotechnology 20090101

• Role of large hydrophobic residues in proteins.

  Bioinformation 20090101

• Zn(II)-cyclen polyacrylamide gel electrophoresis for SNP detection.

  Methods in molecular biology (Clifton, N.J.) 20090101

• The chemical cleavage of mismatch for the detection of mutations in long DNA fragments.

  Methods in molecular biology (Clifton, N.J.) 20090101

• Mismatch oxidation assay: detection of DNA mutations using a standard UV/Vis microplate reader.

  Methods in molecular biology (Clifton, N.J.) 20090101

• Proteome analysis of the Escherichia coli heat shock response under steady-state conditions.

  Proteome science 20090101

• A unique genetic code change in the mitochondrial genome of the parasitic nematode Radopholus similis.

  BMC research notes 20090101

• Quadruplex MAPH: improvement of throughput in high-resolution copy number screening.

  BMC genomics 20090101

• The genome of the stick insect Medauroidea extradentata is strongly methylated within genes and repetitive DNA.

  PloS one 20090101

• Plasma homocysteine in adolescents depends on the interaction between methylenetetrahydrofolate reductase genotype, lipids and folate: a seroepidemiological study.

  Nutrition & metabolism 20090101

• Initial implementation of a comparative data analysis ontology.

  Evolutionary bioinformatics online 20090101

• The word landscape of the non-coding segments of the Arabidopsis thaliana genome.

  BMC genomics 20090101

• A novel mutation in the ADA gene causing severe combined immunodeficiency in an Arab patient: a case report.

  Journal of medical case reports 20090101

• Cellulosic hydrolysate toxicity and tolerance mechanisms in Escherichia coli.

  Biotechnology for biofuels 20090101

• An enhanced single base extension technique for the analysis of complex viral populations.

  PloS one 20090101

• Genome-wide identification of transcription start sites, promoters and transcription factor binding sites in E. coli.

  PloS one 20090101

• Reduction of nitrogen compounds in oceanic basement and its implications for HCN formation and abiotic organic synthesis.

  Geochemical transactions 20090101

• Classification of Myoviridae bacteriophages using protein sequence similarity.

  BMC microbiology 20090101

• Characterization of full-length sequenced cDNA inserts (FLIcs) from Atlantic salmon (Salmo salar).

  BMC genomics 20090101

• A reduction in ribonucleotide reductase activity slows down the chromosome replication fork but does not change its localization.

  PloS one 20090101

• [Investigation of the interaction between DNA and cobalt ferrite nanoparticles by FTIR spectroscopy].

  Bioorganicheskaia khimiia 20090101

• Eurotatorian paraphyly: Revisiting phylogenetic relationships based on the complete mitochondrial genome sequence of Rotaria rotatoria (Bdelloidea: Rotifera: Syndermata).

  BMC genomics 20090101

• Probiotics and gastrointestinal disease: successes, problems and future prospects.

  Gut pathogens 20090101

• Association between the methylenetetrahydrofolate reductase C677T polymorphism and hepatocellular carcinoma risk: a meta-analysis.

  Diagnostic pathology 20090101

• On the hydrogen loss from protonated nucleobases after electronic excitation or collisional electron capture.

  European journal of mass spectrometry (Chichester, England) 20090101

• Examination of genome homogeneity in prokaryotes using genomic signatures.

  PloS one 20090101

• Domain requirements and sequence specificity of DNA binding for the forkhead transcription factor FOXP3.

  PloS one 20090101

• TTS mapping: integrative WEB tool for analysis of triplex formation target DNA sequences, G-quadruplets and non-protein coding regulatory DNA elements in the human genome.

  BMC genomics 20090101

• Automated mass action model space generation and analysis methods for two-reactant combinatorially complex equilibriums: an analysis of ATP-induced ribonucleotide reductase R1 hexamerization data.

  Biology direct 20090101

• The emerging role of cardiovascular risk factor-induced mitochondrial dysfunction in atherogenesis.

  Journal of biomedical science 20090101

• Improved tRNA prediction in the American house dust mite reveals widespread occurrence of extremely short minimal tRNAs in acariform mites.

  BMC genomics 20090101

• Base composition, selection, and phylogenetic significance of indels in the recombination activating gene-1 in vertebrates.

  Frontiers in zoology 20090101

• The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae.

  BMC genomics 20090101

• Molecular evolution of Drosophila cuticular protein genes.

  PloS one 20090101

• MTHFR C677T and postmenopausal breast cancer risk by intakes of one-carbon metabolism nutrients: a nested case-control study.

  Breast cancer research : BCR 20090101

• Skittle: a 2-dimensional genome visualization tool.

  BMC bioinformatics 20090101

• Identification of four novel cytochrome P4501B1 mutations (p.I94X, p.H279D, p.Q340H, and p.K433K) in primary congenital glaucoma patients.

  Molecular vision 20090101

• Universal Features for the Classification of Coding and Non-coding DNA Sequences.

  Bioinformatics and biology insights 20090101

• Anticancer conjugates and cocktails based on methotrexate and nucleoside synergism.

  Clinical medicine. Oncology 20090101

• Detailed mechanism for transposition by TnpA transposase involves DNA shape rather than direct protein-DNA recognition to generate an active nucleoprotein complex.

  F1000 biology reports 20090101

• Bovine gene polymorphisms related to fat deposition and meat tenderness.

  Genetics and molecular biology 20090101

• Non-random pre-transcriptional evolution in HIV-1. A refutation of the foundational conditions for neutral evolution.

  Genetics and molecular biology 20090101

• Identification and phylogenetic inferences on stocks of sharks affected by the fishing industry off the Northern coast of Brazil.

  Genetics and molecular biology 20090101

• Significant genetic differentiation among populations of Anomalocardia brasiliana (Gmelin, 1791): A bivalve with planktonic larval dispersion.

  Genetics and molecular biology 20090101

• Sensing mercury for biomedical and environmental monitoring.

  Sensors (Basel, Switzerland) 20090101

• Nanomaterial-assisted signal enhancement of hybridization for DNA biosensors: a review.

  Sensors (Basel, Switzerland) 20090101

• Overview of electrochemical DNA biosensors: new approaches to detect the expression of life.

  Sensors (Basel, Switzerland) 20090101

• DNA repair and free radicals, new insights into the mechanism of spore photoproduct lyase revealed by single amino acid substitution.

  The Journal of biological chemistry 20081226

• DNA Cytosine demethylation: are we getting close?

  Cell 20081226

• DNA demethylation in zebrafish involves the coupling of a deaminase, a glycosylase, and gadd45.

  Cell 20081226

• 5-(1-Acetoxyvinyl)-cycloSaligenyl-2',3'-dideoxy-2',3'- didehydrothymidine monophosphates, a second type of new, enzymatically activated cycloSaligenyl pronucleotides.

  Journal of medicinal chemistry 20081225

• Unusual radical 6-endo cyclization to carbocyclic-ENA and elucidation of its solution conformation by 600 MHz NMR and ab initio calculations.

  Organic & biomolecular chemistry 20081221

• Thymine DNA glycosylase represses myocardin-induced smooth muscle cell differentiation by competing with serum response factor for myocardin binding.

  The Journal of biological chemistry 20081219

• Thymine-DNA glycosylase interacts with and functions as a coactivator of p53 family proteins.

  Biochemical and biophysical research communications 20081219

• Combined NMR and DFT studies for the absolute configuration elucidation of the spore photoproduct, a UV-induced DNA lesion.

  Journal of the American Chemical Society 20081217

• Role of ribose in the initial excited state structural dynamics of thymidine in water solution: a resonance Raman and density functional theory investigation.

  The journal of physical chemistry. B 20081211

• Thymine dimer-induced structural changes to the DNA duplex examined with reactive probes (†).

  Biochemistry 20081209

• Gas-phase thermochemical properties of pyrimidine nucleobases.

  The Journal of organic chemistry 20081205

• Phosphodiester-mediated reaction of cisplatin with guanine in oligodeoxyribonucleotides.

  Biochemistry 20081202

• The mutagenic properties of BrdUTP in a random mutagenesis process.

  Molecular biology reports 20081201

• Repair of deaminated base damage by Schizosaccharomyces pombe thymine DNA glycosylase.

  DNA repair 20081201

• Novel synthesis and anti-HIV activity of 4'-branched exomethylene carbocyclic nucleosides using a ring-closing metathesis of triene.

  Nucleosides, nucleotides & nucleic acids 20081201

• A novel nucleoside kinase from Burkholderia thailandensis: a member of the phosphofructokinase B-type family of enzymes.

  The FEBS journal 20081201

• A dentin sialophosphoprotein mutation that partially disrupts a splice acceptor site causes type II dentin dysplasia.

  Journal of endodontics 20081201

• Estimation of copy number using SYBR Green: confounding by AT-rich DNA and by variation in amplicon length.

  The American journal of tropical medicine and hygiene 20081201

• Mitochondrial DNA aberrations of bone marrow cells from patients with aplastic anemia.

  Journal of Korean medical science 20081201

• Protective effects of a topical antioxidant mixture containing vitamin C, ferulic acid, and phloretin against ultraviolet-induced photodamage in human skin.

  Journal of cosmetic dermatology 20081201

• [Chemical constituents from flowers of Carthamus tinctorius].

  Zhongguo Zhong yao za zhi = Zhongguo zhongyao zazhi = China journal of Chinese materia medica 20081201

• Peeling single-stranded DNA from graphite surface to determine oligonucleotide binding energy by force spectroscopy.

  Nano letters 20081201

• Gold nanoparticle-based colorimetric and 'turn-on' fluorescent probe for mercury(II) ions in aqueous solution.

  Analytical chemistry 20081201

• Etiology of hypercoagulable state in women with recurrent fetal loss without other causes of miscarriage from Southern Italy: new clinical target for antithrombotic therapy.

  Biologics : targets & therapy 20081201

• Characterization, reactivity and photosensitizing properties of the triplet excited state of alpha-lapachone.

  Physical chemistry chemical physics : PCCP 20081128

• Structure and function of photolyase and in vivo enzymology: 50th anniversary.

  The Journal of biological chemistry 20081121

• Coordinating the initial steps of base excision repair. Apurinic/apyrimidinic endonuclease 1 actively stimulates thymine DNA glycosylase by disrupting the product complex.

  The Journal of biological chemistry 20081121

• Valence anion of thymine in the DNA pi-stack.

  Journal of the American Chemical Society 20081119

• Internal sodium ions and water molecules in guanine quadruplexes: magnetic relaxation dispersion studies of [d(G3T4G3)]2 and [d(G4T4G4)]2.

  Biochemistry 20081118

• The mitochondrial view of Blastocladiella emersonii.

  Gene 20081115

• Identification of cytotoxic constituent of Indonesian sponge Kaliapsis sp. (Bowerbank).

  Pakistan journal of biological sciences : PJBS 20081115

• Theoretical insight into the intrinsic ultrafast formation of cyclobutane pyrimidine dimers in UV-irradiated DNA: thymine versus cytosine.

  The journal of physical chemistry. B 20081113

• Heterogeneity of osmium oxidation efficiency at consecutive thymines.

  Organic & biomolecular chemistry 20081107

• Nucleic acid secondary structures containing the double-headed nucleoside 5'(S)-C-(2-(thymin-1-yl)ethyl)thymidine.

  Organic & biomolecular chemistry 20081107

• X-ray absorption spectroscopy of the nucleotide bases at the carbon, nitrogen, and oxygen K-edges.

  The journal of physical chemistry. B 20081106

• Photoreactivity of furocoumarins and DNA in PUVA therapy: formation of psoralen-thymine adducts.

  The journal of physical chemistry. B 20081106

• DNA polymorphism as an origin of adenine-thymine tract length-dependent threading intercalation rate.

  Journal of the American Chemical Society 20081105

• The stereochemistry of trans-4-hydroxynonenal-derived exocyclic 1,N2-2'-deoxyguanosine adducts modulates formation of interstrand cross-links in the 5'-CpG-3' sequence.

  Biochemistry 20081104

• Nucleotide capacitance calculation for DNA sequencing.

  Biophysical journal 20081101

• Plasticity of Drosophila Stat DNA binding shows an evolutionary basis for Stat transcription factor preferences.

  EMBO reports 20081101

• Synthesis and biological evaluation of the Zn (II)-IDB complexes appended with oligopolyamide as potent artificial nuclease.

  Bioorganic & medicinal chemistry letters 20081101

• Inner-shell chemical shift of DNA/RNA bases and inheritance from their parent purine and pyrimidine.

  Journal of synchrotron radiation 20081101

• Stacking and not solely topology of T3 loops controls rigidity and ammonium ion movement within d(G4T3G4)2 G-quadruplex.

  Journal of the American Chemical Society 20081029

• Design of a gold nanoprobe for rapid and portable mercury detection with the naked eye.

  Chemical communications (Cambridge, England) 20081028

• Fluorescence 'turn on' chemosensors for Ag+ and Hg2+ based on tetraphenylethylene motif featuring adenine and thymine moieties.

  Organic letters 20081016

• Oxidative demethylation of 3-methylthymine and 3-methyluracil in single-stranded DNA and RNA by mouse and human FTO.

  FEBS letters 20081015

• Synthesis and properties of 3'-amino-2',4'-BNA, a bridged nucleic acid with a N3'-->P5' phosphoramidate linkage.

  Bioorganic & medicinal chemistry 20081015

• Fe(II)/alpha-ketoglutarate hydroxylases involved in nucleobase, nucleoside, nucleotide, and chromatin metabolism.

  Dalton transactions (Cambridge, England : 2003) 20081014

• Pharmacogenetic prediction of clinical outcome in advanced colorectal cancer patients receiving oxaliplatin/5-fluorouracil as first-line chemotherapy.

  British journal of cancer 20081007

• Luminescence resonance energy transfer investigation of conformational changes in the ligand binding domain of a kainate receptor.

  The Journal of biological chemistry 20081003

• Physcomitrella HMGA-type proteins display structural differences compared to their higher plant counterparts.

  Biochemical and biophysical research communications 20081003

• Guanine quadruplex formation by RNA/DNA hybrid analogs of Oxytricha telomere G(4)T(4)G(4) fragment.

  Biopolymers 20081001

• Late (> 5 years) regional lymph node metastasis of oral squamous cell carcinoma (SCC), proven by p53 mutation analysis.

  Journal of cranio-maxillo-facial surgery : official publication of the European Association for Cranio-Maxillo-Facial Surgery 20081001

• Thermodynamic potential for the abiotic synthesis of adenine, cytosine, guanine, thymine, uracil, ribose, and deoxyribose in hydrothermal systems.

  Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life 20081001

• Interaction of the DNA bases and their mononucleotides with pyridine-2-carbaldehyde thiosemicarbazonecopper(II) complexes. Structure of the cytosine derivative.

  Journal of inorganic biochemistry 20081001

• A novel point mutation in type III collagen gene resulting in exon 24 skipping in a case of vascular type Ehlers-Danlos syndrome.

  Archives of dermatological research 20081001

• Bisphosphonate inhibitors of ATP-mediated HIV-1 reverse transcriptase catalyzed excision of chain-terminating 3'-azido, 3'-deoxythymidine: a QSAR investigation.

  Bioorganic & medicinal chemistry 20081001

• Mutability and importance of a hypermutable cell subpopulation that produces stress-induced mutants in Escherichia coli.

  PLoS genetics 20081001

• The association of interleukin-4 haplotypes with chronic periodontitis in a Czech population.

  Journal of periodontology 20081001

• Study on homocysteine levels and methylenetetrahydrofolate reductase gene variant (C677T) in a population of Buenos Aires City.

  Clinical and experimental hypertension (New York, N.Y. : 1993) 20081001

• Electronic splitting in the excited states of DNA base homodimers and -trimers: an evaluation of short-range and Coulombic interactions.

  Physical chemistry chemical physics : PCCP 20081001

• Pulsed-field ionization photoelectron and IR-UV resonant photoionization spectroscopy of Al-thymine.

  The Journal of chemical physics 20080928

• Formation of cross-linked adducts between guanine and thymine mediated by hydroxyl radical and one-electron oxidation: a theoretical study.

  Organic & biomolecular chemistry 20080921

• Nucleic acid structural engineering using pyrene-functionalized 2'-amino-alpha-L-LNA monomers and abasic sites.

  The Journal of organic chemistry 20080919

• Heterocyclic diamidine interactions at AT base pairs in the DNA minor groove: effects of heterocycle differences, DNA AT sequence and length.

  The journal of physical chemistry. B 20080918

• Observation of singlet cycloreversion of thymine oxetanes by direct photolysis.

  The journal of physical chemistry. B 20080918

• Structure of the 1,N2-ethenodeoxyguanosine adduct opposite cytosine in duplex DNA: Hoogsteen base pairing at pH 5.2.

  Chemical research in toxicology 20080915

• PNA/DNA interstrand cross-links from a modified PNA base upon photolysis or oxidative conditions.

  Bioorganic & medicinal chemistry letters 20080915

• A contact photo-cross-linking investigation of the active site of the 8-17 deoxyribozyme.

  Journal of molecular biology 20080912

• Photophysics and deactivation pathways of thymine.

  The journal of physical chemistry. A 20080911

• Ultrafast vibrational dynamics of adenine-thymine base pairs in DNA oligomers.

  The journal of physical chemistry. B 20080911

• Electrochemical and spectrometric study of antioxidant activity of pomiferin, isopomiferin, osajin and catalposide.

  Journal of pharmaceutical and biomedical analysis 20080910

• Context-dependent photodimerization in isolated thymine-thymine steps in DNA.

  Journal of the American Chemical Society 20080910

• Chiral peptide nucleic acid monomers (PNAM) with modified backbones.

  Organic & biomolecular chemistry 20080907

• Ab initio determination of the electron affinities of DNA and RNA nucleobases.

  The Journal of chemical physics 20080907

• Synthesis of 6'-branched locked nucleic acid by a radical TEMPO-scavanged stereoselective mercury cyclization.

  The Journal of organic chemistry 20080905

• Triazole-linked analogue of deoxyribonucleic acid ((TL)DNA): design, synthesis, and double-strand formation with natural DNA.

  Organic letters 20080904

• Interconversion of the cis-5R,6S- and trans-5R,6R-thymine glycol lesions in duplex DNA.

  Journal of the American Chemical Society 20080903

• Microsatellite GTn-repeat polymorphism in the promoter of heme oxygenase-1 gene is an independent predictor of tumor recurrence in male oral squamous cell carcinoma patients.

  Journal of oral pathology & medicine : official publication of the International Association of Oral Pathologists and the American Academy of Oral Pathology 20080901

• Morphology of the sella turcica in Axenfeld-Rieger syndrome with PITX2 mutation.

  Journal of oral pathology & medicine : official publication of the International Association of Oral Pathologists and the American Academy of Oral Pathology 20080901

• UVA1 genotoxicity is mediated not by oxidative damage but by cyclobutane pyrimidine dimers in normal mouse skin.

  The Journal of investigative dermatology 20080901

• Somatically acquired hypomethylation of IGF2 in breast and colorectal cancer.

  Human molecular genetics 20080901

• Detection of the Gua/Cyt-to-Cyt/Gua mutation in a Gua/Cyt-lined sequence using Zn2+-cyclen polyacrylamide gel electrophoresis.

  Analytical biochemistry 20080901

• Molecular cloning and sequence analysis of the duck enteritis virus UL5 gene.

  Virus research 20080901

• Expansion of donor-derived hematopoietic stem cells with PIGA mutation associated with late graft failure after allogeneic stem cell transplantation.

  Blood 20080901

• A topical antioxidant solution containing vitamins C and E stabilized by ferulic acid provides protection for human skin against damage caused by ultraviolet irradiation.

  Journal of the American Academy of Dermatology 20080901

• Cytokine gene polymorphisms in periodontal disease: a meta-analysis of 53 studies including 4178 cases and 4590 controls.

  Journal of clinical periodontology 20080901

• C-->T transition mutations are not solely UVB-signature mutations, because they are also generated by UVA.

  The Journal of investigative dermatology 20080901

• Nucleotide identification and orientation discrimination of DNA homopolymers immobilized in a protein nanopore.

  Nano letters 20080901

• Novel ryanodine receptor mutation that may cause malignant hyperthermia.

  Anesthesiology 20080901

• [The development and application of method for detecting bovine complex vertebral malformation].

  Yi chuan = Hereditas 20080901

• Enamel formation genes are associated with high caries experience in Turkish children.

  Caries research 20080901

• Human MLH1 protein participates in genomic damage checkpoint signaling in response to DNA interstrand crosslinks, while MSH2 functions in DNA repair.

  PLoS genetics 20080901

• TGFA/TAQ I polymorphism in nonsyndromic cleft lip and palate patients from Rio Grande Do Sul, Brazil.

  The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association 20080901

• Association of C-509T and T869C polymorphisms of transforming growth factor-beta1 gene with chronic allograft nephropathy and graft survival in Korean renal transplant recipients.

  Transplantation proceedings 20080901

• Deletion of the pluripotency-associated Tex19.1 gene causes activation of endogenous retroviruses and defective spermatogenesis in mice.

  PLoS genetics 20080901

• Regulation of cell survival and death signals induced by oxidative stress.

  Journal of clinical biochemistry and nutrition 20080901

• [Effect of extract of ginkgo biloba leaves on proliferation of SCs cultured in vitro].

  Zhongguo xiu fu chong jian wai ke za zhi = Zhongguo xiufu chongjian waike zazhi = Chinese journal of reparative and reconstructive surgery 20080901

• Beta-aminoisobutyric acid prevents diet-induced obesity in mice with partial leptin deficiency.

  Obesity (Silver Spring, Md.) 20080901

• Cause and consequences of genetic and epigenetic alterations in human cancer.

  Current genomics 20080901

• Sum-frequency-generation spectroscopy of DNA films in air and aqueous environments.

  Biointerphases 20080901

• Structure determination of an interstrand-type cis-anti cyclobutane thymine dimer produced in high yield by UVB light in an oligodeoxynucleotide at acidic pH.

  Journal of the American Chemical Society 20080827

• Study of the thymine molecule: equilibrium structure from joint analysis of gas-phase electron diffraction and microwave data and assignment of vibrational spectra using results of ab initio calculations.

  The journal of physical chemistry. A 20080821

• Molecular basis of DNA photodimerization: intrinsic production of cyclobutane cytosine dimers.

  Journal of the American Chemical Society 20080813

• Oxidation of guanine by carbonate radicals derived from photolysis of carbonatotetramminecobalt(III) complexes and the pH dependence of intrastrand DNA cross-links mediated by guanine radical reactions.

  Chembiochem : a European journal of chemical biology 20080811

• Single base interrogation by a fluorescent nucleotide: each of the four DNA bases identified by fluorescence spectroscopy.

  Chemical communications (Cambridge, England) 20080807

• G-quadruplex DNA assemblies: loop length, cation identity, and multimer formation.

  Journal of the American Chemical Society 20080806

• Mutational specificity of gamma-radiation-induced guanine-thymine and thymine-guanine intrastrand cross-links in mammalian cells and translesion synthesis past the guanine-thymine lesion by human DNA polymerase eta.

  Biochemistry 20080805

• Electronic and vibrational spectroscopy of 1-methylthymine and its water clusters: the dark state survives hydration.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20080804

• Genetic analysis reveals an intrinsic property of the germinal center B cells to generate A:T mutations.

  DNA repair 20080802

• Single molecule conformational analysis of DNA G-quadruplexes.

  Biochimie 20080801

• Characteristic differences in the X-ray photoelectron spectrum between B-DNA and M-DNA monolayers on gold.

  Journal of inorganic biochemistry 20080801

• Microcapsulation of DNA and the adsorption of toxic substances.

  Journal of microencapsulation 20080801

• Homozygous myotonic dystrophy with craniosynostosis.

  Journal of child neurology 20080801

• Development of bioluminescent pyrophosphate assay using pyruvate phosphate dikinase and its application to single-nucleotide polymorphism analysis.

  Analytical biochemistry 20080801

• Synthetic studies on ezomycins: stereoselective route to a thymine octosyl nucleoside derivative.

  The Journal of organic chemistry 20080801

• Impact of the endothelial nitric oxide synthase gene G894T polymorphism on renal endothelial function in patients with type 2 diabetes.

  Pharmacogenetics and genomics 20080801

• Expression of the Helicobacter pylori adhesin SabA is controlled via phase variation and the ArsRS signal transduction system.

  Microbiology (Reading, England) 20080801

• Interferon-gamma and interleukin-12 gene polymorphisms and their relation to aggressive and chronic periodontitis and key periodontal pathogens.

  Journal of periodontology 20080801

• Targeting tumor cells expressing p53 with a water-soluble inhibitor of Hdm2.

  Molecular cancer therapeutics 20080801

• Metahybrid density functional theory and correlated ab initio studies on microhydrated adenine-thymine base pairs.

  The journal of physical chemistry. B 20080731

• Transient silencing of Plasmodium falciparum Tudor Staphylococcal Nuclease suggests an essential role for the protein.

  Biochemical and biophysical research communications 20080725

• Theoretical study of excitation energy transfer in DNA photolyase.

  The journal of physical chemistry. B 20080724

• O-Allyl protection in the Fmoc-based synthesis of difficult PNA.

  Organic & biomolecular chemistry 20080721

• Superior removal of hydantoin lesions relative to other oxidized bases by the human DNA glycosylase hNEIL1.

  Biochemistry 20080708

• Isolated ocular disease is associated with decreased mucolipin-1 channel conductance.

  Investigative ophthalmology & visual science 20080701

• Carrier of R14W in carbonic anhydrase IV presents Bothnia dystrophy phenotype caused by two allelic mutations in RLBP1.

  Investigative ophthalmology & visual science 20080701

• Coagulation gene predictors of photodynamic therapy for occult choroidal neovascularization in age-related macular degeneration.

  Investigative ophthalmology & visual science 20080701

• Protective effects of vitamin glycosides on gamma-radiation and H2O2-induced decomposition of thymine in aqueous solutions.

  Journal of radiation research 20080701

• A study of oxaliplatin-nucleobase interactions using ion trap electrospray mass spectrometry.

  Analytical and bioanalytical chemistry 20080701

• Ca2+-induced Ca2+ release in Aplysia bag cell neurons requires interaction between mitochondrial and endoplasmic reticulum stores.

  Journal of neurophysiology 20080701

• Genetic polymorphisms of the RAS-cytokine pathway and chronic kidney disease.

  Pediatric nephrology (Berlin, Germany) 20080701

• Identification of a putative human mitochondrial thymidine monophosphate kinase associated with monocytic/macrophage terminal differentiation.

  Genes to cells : devoted to molecular & cellular mechanisms 20080701

• Synthesis and characterization of water-soluble free-base, zinc and copper porphyrin-oligonucleotide conjugates.

  Bioorganic & medicinal chemistry 20080701

• Chemical and genetic validation of dihydrofolate reductase-thymidylate synthase as a drug target in African trypanosomes.

  Molecular microbiology 20080701

• Effect of the GC content of DNA on the distribution of UVB-induced bipyrimidine photoproducts.

  Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 20080701

• The thymine-DNA glycosylase regulatory domain: residual structure and DNA binding.

  Biochemistry 20080624

• Interaction between thymine dimer and flavin-adenine dinucleotide: a DFT and direct ab initio molecular dynamics study.

  The journal of physical chemistry. B 20080619

• Proteins that bind methylated DNA and human cancer: reading the wrong words.

  British journal of cancer 20080617

• Two different transcription factors discriminate the -315C>T polymorphism of the Fc epsilon RI alpha gene: binding of Sp1 to -315C and of a high mobility group-related molecule to -315T.

  Journal of immunology (Baltimore, Md. : 1950) 20080615

• Characterization of Dnmt3b:thymine-DNA glycosylase interaction and stimulation of thymine glycosylase-mediated repair by DNA methyltransferase(s) and RNA.

  Journal of molecular biology 20080606

• Synthetic studies on amipurimycin: total synthesis of a thymine nucleoside analogue.

  The Journal of organic chemistry 20080606

• Complete sequence and gene organization of the mitochondrial genome of Siamensis Crocodile (Crocodylus siamensis).

  Molecular biology reports 20080601

• Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts.

  Genome research 20080601

• De novo search for non-coding RNA genes in the AT-rich genome of Dictyostelium discoideum: performance of Markov-dependent genome feature scoring.

  Genome research 20080601

• IFNG +874T/A, IL10 -1082G/A and TNF -308G/A polymorphisms in association with tuberculosis susceptibility: a meta-analysis study.

  Human genetics 20080601

• A purine-selective nucleobase/nucleoside transporter in PK15NTD cells.

  American journal of physiology. Regulatory, integrative and comparative physiology 20080601

• Characterization of Aquifex aeolicus 4-diphosphocytidyl-2C-methyl-d-erythritol kinase - ligand recognition in a template for antimicrobial drug discovery.

  The FEBS journal 20080601

• Minisequencing with acyclonucleoside triphosphates tethered to lanthanide(III) chelates.

  Bioconjugate chemistry 20080601

• Mutations of the withered (whd) gene in Drosophila melanogaster confer hypersensitivity to oxidative stress and are lesions of the carnitine palmitoyltransferase I (CPT I) gene.

  Genome 20080601

• Patterns of evolution and host gene mimicry in influenza and other RNA viruses.

  PLoS pathogens 20080601

• A pyrazine-based fluorescence-enhancing ligand with a high selectivity for thymine in AP site-containing DNA duplexes.

  Analytical sciences : the international journal of the Japan Society for Analytical Chemistry 20080601

• Group II intron protein localization and insertion sites are affected by polyphosphate.

  PLoS biology 20080601

• The role of platelet-derived endothelial cell growth factor/thymidine phosphorylase in tumor behavior.

  Nucleosides, nucleotides & nucleic acids 20080601

• Stabilizing synthetic data in the DNA of living organisms.

  Systems and synthetic biology 20080601

• Electrochemical Investigation of oligonucleotide-DNA hybridization on poly(4-methoxyphenethylamine).

  International journal of molecular sciences 20080601

• Photosensitization of bioinspired thymine-containing polymers.

  The journal of physical chemistry. A 20080529

• Stabilization by extra-helical thymines of a DNA duplex with Hoogsteen base pairs.

  Journal of the American Chemical Society 20080528

• Theoretical study on the complexes of benzene with isoelectronic nitrogen-containing heterocycles.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20080516

• Interaction of DNA bases with silver nanoparticles: assembly quantified through SPRS and SERS.

  Journal of colloid and interface science 20080515

• Theoretical elucidation of conflicting experimental data on vertical ionization potentials of microhydrated thymine.

  The journal of physical chemistry. A 20080515

• Light-induced aggregation of colloidal gold nanoparticles capped by thymine derivatives.

  Langmuir : the ACS journal of surfaces and colloids 20080506

• A concise synthesis of 3-fluoro-5-thio-xylo- and glucopyranoses, useful precursors towards their corresponding pyranonucleoside derivatives.

  Carbohydrate research 20080505

• Predicting thymine dimerization yields from molecular dynamics simulations.

  Biophysical journal 20080501

• Genotype-phenotype correlation in non-Hallopeau-Siemens recessive dystrophic epidermolysis bullosa: the splice site mutation c.6216+5G > T in the COL7A1 gene results in aberrant and normal splicings.

  Journal of dermatological science 20080501

• Tacrolimus ointment neither blocks ultraviolet B nor affects expression of thymine dimers and p53 in human skin.

  Journal of dermatological science 20080501

• A new T677C mutation of the aspartoacylase gene encodes for a protein with no enzymatic activity.

  Clinical biochemistry 20080501

• A novel monofunctional DNA glycosylase activity against thymine glycol in mouse cell nuclei.

  Journal of radiation research 20080501

• Mutations of carnitine palmitoyltransferase II (CPT II) in Japanese patients with CPT II deficiency.

  Clinical genetics 20080501

• Structural studies of nucleoside analog and feedback inhibitor binding to Drosophila melanogaster multisubstrate deoxyribonucleoside kinase.

  The FEBS journal 20080501

• A theoretical study on interactions between mitoxantrone as an anticancer drug and DNA: application in drug design.

  Chemical biology & drug design 20080501

• Oxidative amination of cuprated pyrimidine and purine derivatives.

  Organic letters 20080501

• Topical thymidine dinucleotide treatment reduces development of ultraviolet-induced basal cell carcinoma in Ptch-1+/- mice.

  The American journal of pathology 20080501

• A new acycloguanosine-specific supermutant of herpes simplex virus type 1 thymidine kinase suitable for PET imaging and suicide gene therapy for potential use in patients treated with pyrimidine-based cytotoxic drugs.

  Journal of nuclear medicine : official publication, Society of Nuclear Medicine 20080501

• Synthesis and biological activity of mustard derivatives of thymine.

  Nucleosides, nucleotides & nucleic acids 20080501

• The electron affinities of deprotonated adenine, guanine, cytosine, uracil, and thymine.

  Nucleosides, nucleotides & nucleic acids 20080501

• A statistical analysis of the robustness of alternate genetic coding tables.

  International journal of molecular sciences 20080501

• Cu2+/+ cation coordination to adenine--thymine base pair. Effects on intermolecular proton-transfer processes.

  The journal of physical chemistry. B 20080417

• A doorway state leads to photostability or triplet photodamage in thymine DNA.

  Journal of the American Chemical Society 20080416

• A functional TNFRSF5 gene variant is associated with risk of lymphoma.

  Blood 20080415

• Association of interindividual differences in p14ARF promoter methylation with single nucleotide polymorphism in primary colorectal cancer.

  Cancer 20080415

• Nuclear magnetic resonance investigation of primer--template models: formation of a pyrimidine bulge upon misincorporation.

  Biochemistry 20080415

• Dynamics of Recognition between tRNA and elongation factor Tu.

  Journal of molecular biology 20080411

• The crystal structure of beta-alanine synthase from Drosophila melanogaster reveals a homooctameric helical turn-like assembly.

  Journal of molecular biology 20080411

• Solution structure of a DNA duplex containing a guanine-difluorotoluene pair: a wobble pair without hydrogen bonding?

  Journal of the American Chemical Society 20080409

• DNA tandem lesion repair by strand displacement synthesis and nucleotide excision repair.

  Biochemistry 20080408

• Mechanisms of base selection by the Escherichia coli mispaired uracil glycosylase.

  The Journal of biological chemistry 20080404

• Thin-film properties of DNA and RNA bases: a combined experimental and theoretical study.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20080404

• Structures and energetics of base flipping of the thymine dimer depend on DNA sequence.

  The journal of physical chemistry. B 20080403

• Binding of MutS protein to oligonucleotides containing a methylated or an ethylated guanine residue, and correlation with mutation frequency.

  Mutation research 20080402

• Structure and electronic properties of 'DNA-gold-nanotube' systems: a quantum chemical analysis.

  Journal of molecular graphics & modelling 20080401

• Tudor domain proteins in protozoan parasites and characterization of Plasmodium falciparum tudor staphylococcal nuclease.

  International journal for parasitology 20080401

• The native cyclobutane pyrimidine dimer photolyase of rice is phosphorylated.

  Plant physiology 20080401

• Nonspecific base recognition mediated by water bridges and hydrophobic stacking in ribonuclease I from Escherichia coli.

  Protein science : a publication of the Protein Society 20080401

• A critical analysis of disease-associated DNA polymorphisms in the genes of cattle, goat, sheep, and pig.

  Mammalian genome : official journal of the International Mammalian Genome Society 20080401

• Generation of thymine radicals from 6-alkoxy-5-bromo-5,6-dihydrothymine derivatives by radiolytic reduction and photolytic dehalogenation.

  Chemical research in toxicology 20080401

• A novel approach for analysis of oligonucleotide-cisplatin interactions by continuous elution gel electrophoresis coupled to isotope dilution inductively coupled plasma mass spectrometry and matrix-assisted laser desorption/ionization mass spectrometry.

  Electrophoresis 20080401

• Biosynthetic potentials of metabolites and their hierarchical organization.

  PLoS computational biology 20080401

• Novel CYP4V2 gene mutation in a Mexican patient with Bietti's crystalline corneoretinal dystrophy.

  Current eye research 20080401

• [Protein 3000 project 'Transcription and translation'].

  Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 20080401

• [Chemical constituents from sea cucumber Holothuria nobilis].

  Zhong yao cai = Zhongyaocai = Journal of Chinese medicinal materials 20080401

• A single-molecule study on the structural damage of ultraviolet radiated DNA.

  International journal of molecular sciences 20080401

• Specificity of stimulation of human 8-oxoguanine-DNA glycosylase by AP endonuclease.

  Biochemical and biophysical research communications 20080328

• Ultraselective fluorescent sensing of Hg2+ through metal coordination-induced molecular aggregation.

  Chemical communications (Cambridge, England) 20080328

• Nucleotide insertion and bypass synthesis of pyrene- and BODIPY-modified oligonucleotides by DNA polymerases.

  Chemical communications (Cambridge, England) 20080328

• First-principles study of physisorption of nucleic acid bases on small-diameter carbon nanotubes.

  Nanotechnology 20080326

• Computational study of thymine dimer radical anion splitting in the self-repair process of duplex DNA.

  Journal of the American Chemical Society 20080319

• Direct NMR detection of alkali metal ions bound to G-quadruplex DNA.

  Journal of the American Chemical Society 20080319

• Structural diversity and extreme stability of unimolecular Oxytricha nova telomeric G-quadruplex.

  Biochemistry 20080318

• Probing noncovalent interactions in biomolecular crystals with terahertz spectroscopy.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20080314

• Toward the exact solution of the electronic Schrödinger equation for noncovalent molecular interactions: worldwide distributed quantum monte carlo calculations.

  The journal of physical chemistry. A 20080313

• Simple STM tip functionalization for rapid DNA sequencing: an Ab initio Green's function study.

  The journal of physical chemistry. A 20080313

• DNA-conducting polymer complexes: a computational study of the hydrogen bond between building blocks.

  The journal of physical chemistry. B 20080313

• Selective one-electron oxidation of duplex DNA oligomers: reaction at thymines.

  Organic & biomolecular chemistry 20080307

• Cyclical DNA methylation of a transcriptionally active promoter.

  Nature 20080306

• Monovalent cation binding by curved DNA molecules containing variable numbers of a-tracts.

  Biophysical journal 20080301

• The frequency of CC to TT tandem mutations in mismatch repair-deficient cells is increased in a cytosine run.

  Mutagenesis 20080301

• 50 years thymine dimer.

  DNA repair 20080301

• Recognition of a flipped base in a hairpinloop DNA by a small peptide.

  Nucleosides, nucleotides & nucleic acids 20080301

• Amidohydrolases of the reductive pyrimidine catabolic pathway purification, characterization, structure, reaction mechanisms and enzyme deficiency.

  Biochimica et biophysica acta 20080301

• Temperature-sensitive photoreactivation of cyclobutane thymine dimer in soybean.

  Journal of radiation research 20080301

• The energetics of rearrangement and water elimination reactions in the radiolysis of the DNA bases in aqueous solution (eaq- and *OH attack): DFT calculations.

  Radiation research 20080301

• GADD45A does not promote DNA demethylation.

  PLoS genetics 20080301

• Methylated DNA recognition during the reversal of epigenetic silencing is regulated by cysteine and serine residues in the Epstein-Barr virus lytic switch protein.

  PLoS pathogens 20080301

• Mycosporine-like amino acids and marine toxins--the common and the different.

  Marine drugs 20080301

• [Expression and sequence analysis of human MutS homologue 2 during different stages of human bronchial epithelial cells induced by cadmium chloride].

  Zhonghua lao dong wei sheng zhi ye bing za zhi = Zhonghua laodong weisheng zhiyebing zazhi = Chinese journal of industrial hygiene and occupational diseases 20080301

• RNA interference in mammalia cells by RNA-3'-PNA chimeras.

  International journal of molecular sciences 20080301

• Polyfunctional binding of thymidine 5'-triphosphate with a synthetic polyammonium receptor containing aromatic groups. Crystal structure of the nucleotide-receptor adduct.

  Journal of the American Chemical Society 20080227

• MeCP2 binding to DNA depends upon hydration at methyl-CpG.

  Molecular cell 20080227

• Direct energy functional minimization under orthogonality constraints.

  The Journal of chemical physics 20080227

• Functional characterization of the Escherichia coli Fis-DNA binding sequence.

  Journal of molecular biology 20080222

• Ab initio study of naphtho-homologated DNA bases.

  The journal of physical chemistry. B 20080221

• Cylindrical projection of electrostatic potential and image analysis tools for damaged DNA: the substitution of thymine with thymine glycol.

  The journal of physical chemistry. B 20080221

• Charge-transfer excitons in DNA.

  The journal of physical chemistry. B 20080221

• Creation of polynucleotide-assisted molecular assemblies in organic solvents: general strategy toward the creation of artificial DNA-like nanoarchitectures.

  Organic & biomolecular chemistry 20080221

• Molecular modelling of the GIR1 branching ribozyme gives new insight into evolution of structurally related ribozymes.

  The EMBO journal 20080220

• Biosynthesis of dTDP-3-acetamido-3,6-dideoxy-alpha-D-glucose.

  The Biochemical journal 20080215

• Mechanism of dTTP inhibition of the bifunctional dCTP deaminase:dUTPase encoded by Mycobacterium tuberculosis.

  Journal of molecular biology 20080215

• Ferrocene-linked thymine/uracil conjugates: base pairing directed self-assembly and supramolecular packing.

  The Journal of organic chemistry 20080215

• Syntheses of N3-substituted thymine acyclic nucleoside phosphonates and a comparison of their inhibitory effect towards thymidine phosphorylase.

  Bioorganic & medicinal chemistry letters 20080215

• Distribution of nucleosides and nucleobases in edible fungi.

  Journal of agricultural and food chemistry 20080213

• Hepatic oxidative DNA damage is associated with increased risk for hepatocellular carcinoma in chronic hepatitis C.

  British journal of cancer 20080212

• Lipophilic sugar nucleotide synthesis by structure-based design of nucleotidylyltransferase substrates.

  Organic & biomolecular chemistry 20080207

• Sequence dependence in base flipping: experimental and computational studies.

  Organic & biomolecular chemistry 20080207

• Characterization of cellular chemical dynamics using combined microfluidic and Raman techniques.

  Analytical and bioanalytical chemistry 20080201

• High-resolution waveguide THz spectroscopy of biological molecules.

  Biophysical journal 20080201

• Mismatch repair proteins collaborate with methyltransferases in the repair of O(6)-methylguanine.

  DNA repair 20080201

• Role of alpha1-adrenoceptor subtypes in the effects of methylenedioxy methamphetamine (MDMA) on body temperature in the mouse.

  British journal of pharmacology 20080201

• The SUMO E3 ligase, AtSIZ1, regulates flowering by controlling a salicylic acid-mediated floral promotion pathway and through affects on FLC chromatin structure.

  The Plant journal : for cell and molecular biology 20080201

• Ethnic and genetic determinants of cardiovascular response to the selective alpha 2-adrenoceptor agonist dexmedetomidine.

  Hypertension (Dallas, Tex. : 1979) 20080201

• Noradrenergic vasoconstriction of pig prostatic small arteries.

  Naunyn-Schmiedeberg's archives of pharmacology 20080201

• Composition of individual nucleobases in diets containing different products from bacterial biomass grown on natural gas, and digestibility in mink (Mustela vison).

  Journal of animal physiology and animal nutrition 20080201

• Formation of gutingimycin: analytical investigation of trioxacarcin A-mediated alkylation of dsDNA.

  Analytical and bioanalytical chemistry 20080201

• Identification and biochemical characterization of a novel ryanodine receptor gene mutation associated with malignant hyperthermia.

  Anesthesiology 20080201

• Monte carlo simulations of site-specific radical attack to DNA bases.

  Radiation research 20080201

• Pharmacogenetics: data, concepts and tools to improve drug discovery and drug treatment.

  European journal of clinical pharmacology 20080201

• Association between genetic variation in transforming growth factors beta1 and beta3 and renal dysfunction in non-diabetic Chinese.

  Clinical and experimental hypertension (New York, N.Y. : 1993) 20080201

• Mutations of different molecular origins exhibit contrasting patterns of regional substitution rate variation.

  PLoS computational biology 20080201

• Stacking interactions and the twist of DNA.

  Journal of the American Chemical Society 20080130

• Thermodynamics of DNA-RNA heteroduplex formation: effects of locked nucleic acid nucleotides incorporated into the DNA strand.

  Biochemistry 20080129

• Enhancement of the transverse conductance in DNA nucleotides.

  The Journal of chemical physics 20080128

• Quenching of fluorescent nucleobases by neighboring DNA: the 'insulator' concept.

  Chembiochem : a European journal of chemical biology 20080125

• Chromophore/DNA interactions: femto- to nanosecond spectroscopy, NMR structure, and electron transfer theory.

  The journal of physical chemistry. B 20080124

• Dynamics in the DNA recognition by DAPI: exploration of the various binding modes.

  The journal of physical chemistry. B 20080124

• Fluorescence and electrochemical detection of pyrimidine/purine transversion by a ferrocenyl aminonaphthyridine derivative.

  Organic & biomolecular chemistry 20080121

• Detection and evaluation of hydrogen bond strength in nucleic acid base pairs.

  The journal of physical chemistry. A 20080117

• Cell cycle-specific UNG2 phosphorylations regulate protein turnover, activity and association with RPA.

  The EMBO journal 20080109

• Synthetic nucleic acid secondary structures containing the four stereoisomers of 1,4-bis(thymine-1-yl)butane-2,3-diol.

  Organic & biomolecular chemistry 20080107

• DNA polymerase theta (POLQ) can extend from mismatches and from bases opposite a (6-4) photoproduct.

  DNA repair 20080101

• Microarray-based method to analyze methylation status of E-cadherin gene in leukemia.

  Clinica chimica acta; international journal of clinical chemistry 20080101

• A family with atypical cystic fibrosis: brother and sister with heterozygosity for both G542X and R117H.

  Pediatric and developmental pathology : the official journal of the Society for Pediatric Pathology and the Paediatric Pathology Society 20080101

• Macroscopic DNA helices.

  Biomacromolecules 20080101

• Novel FRET-based assay to detect reverse transcriptase activity using modified dUTP analogues.

  Bioconjugate chemistry 20080101

• Presence and significance of interleukin-1 polymorphism in patients who present with acute coronary syndrome, angina, and chronic periodontitis: an epidemiologic pilot study.

  Journal of periodontology 20080101

• UV protective effects of DNA repair enzymes and RNA lotion.

  Photochemistry and photobiology 20080101

• Specificity of DNA-binding by the FAX-1 and NHR-67 nuclear receptors of Caenorhabditis elegans is partially mediated via a subclass-specific P-box residue.

  BMC molecular biology 20080101

• Regulation of mouse Scgb3a1 gene expression by NF-Y and association of CpG methylation with its tissue-specific expression.

  BMC molecular biology 20080101

• Synthesis and DNA-polymerase incorporation of colored 4-selenothymidine triphosphate for polymerase recognition and DNA visualization.

  Angewandte Chemie (International ed. in English) 20080101

• The mitochondrial genome of the hexactinellid sponge Aphrocallistes vastus: evidence for programmed translational frameshifting.

  BMC genomics 20080101

• Genomic DNA from animals shows contrasting strand bias in large and small subsequences.

  BMC genomics 20080101

• A novel method to quantify local CpG methylation density by regional methylation elongation assay on microarray.

  BMC genomics 20080101

• Alteration of viral lipid composition by expression of the phospholipid floppase ABCB4 reduces HIV vector infectivity.

  Retrovirology 20080101

• A naturally-occurring mutation in Cacna1f in a rat model of congenital stationary night blindness.

  Molecular vision 20080101

• A novel mutation in FRMD7 causing X-linked idiopathic congenital nystagmus in a large family.

  Molecular vision 20080101

• Equilibrium model selection: dTTP induced R1 dimerization.

  BMC systems biology 20080101

• Systematic validation and atomic force microscopy of non-covalent short oligonucleotide barcode microarrays.

  PloS one 20080101

• BRCA1 promoter methylation in peripheral blood DNA of mutation negative familial breast cancer patients with a BRCA1 tumour phenotype.

  Breast cancer research : BCR 20080101

• Caspase-3 activation and DNA damage in pig skin organ culture after solar irradiation.

  Photochemistry and photobiology 20080101

• Energy dependence of effective atomic numbers for photon energy absorption and photon interaction: studies of some biological molecules in the energy range 1 keV-20 MeV.

  Medical physics 20080101

• Detection of methylation in promoter sequences by melting curve analysis-based semiquantitative real time PCR.

  BMC cancer 20080101

• Reliability and applications of statistical methods based on oligonucleotide frequencies in bacterial and archaeal genomes.

  BMC genomics 20080101

• Comparison of different real-time PCR chemistries and their suitability for detection and quantification of genetically modified organisms.

  BMC biotechnology 20080101

• Endothelial nitric oxide synthase gene T-786C and 27-bp repeat gene polymorphisms in retinopathy of prematurity.

  Molecular vision 20080101

• Hypermethylated MAL gene - a silent marker of early colon tumorigenesis.

  Journal of translational medicine 20080101

• Real-time PCR/MCA assay using fluorescence resonance energy transfer for the genotyping of resistance related DHPS-540 mutations in Plasmodium falciparum.

  Malaria journal 20080101

• [Polymethylene nucleic acid derivatives with omega-functional groups: vi. [8-(2-oxocyclohexyl)-9-oxooctyl]pyrimidines as potential inhibitors of pyrimidine phosphorylases].

  Bioorganicheskaia khimiia 20080101

• Improving the prediction of mRNA extremities in the parasitic protozoan Leishmania.

  BMC bioinformatics 20080101

• Comparative genomics-based investigation of resequencing targets in Vibrio fischeri: focus on point miscalls and artefactual expansions.

  BMC genomics 20080101

• Novel forms of Paired-like homeodomain transcription factor 2 (PITX2): generation by alternative translation initiation and mRNA splicing.

  BMC molecular biology 20080101

• Maternal TLR4 and NOD2 gene variants, pro-inflammatory phenotype and susceptibility to early-onset preeclampsia and HELLP syndrome.

  PloS one 20080101

• C677T polymorphism in the methylenetetrahydrofolate reductase gene is associated with primary closed angle glaucoma.

  Molecular vision 20080101

• Increased mitochondrial DNA damage and down-regulation of DNA repair enzymes in aged rodent retinal pigment epithelium and choroid.

  Molecular vision 20080101

• Ovarian cancer risk in Polish BRCA1 mutation carriers is not associated with the prohibitin 3' untranslated region polymorphism.

  BMC cancer 20080101

• Acetylation regulates WRN catalytic activities and affects base excision DNA repair.

  PloS one 20080101

• Genomic context analysis in Archaea suggests previously unrecognized links between DNA replication and translation.

  Genome biology 20080101

• Perceiving molecular evolution processes in Escherichia coli by comprehensive metabolite and gene expression profiling.

  Genome biology 20080101

• Structure and expression pattern of Oct4 gene are conserved in vole Microtus rossiaemeridionalis.

  BMC genomics 20080101

• Optical analysis of Hg2+ ions by oligonucleotide-gold-nanoparticle hybrids and DNA-based machines.

  Angewandte Chemie (International ed. in English) 20080101

• Association of insulin sensitivity and glucose tolerance with the c.825C>T variant of the G protein beta-3 subunit gene.

  Journal of diabetes and its complications 20080101

• RNA polymerase II stalling: loading at the start prepares genes for a sprint.

  Genome biology 20080101

• Role of thymine in protein coding frames of mRNA sequences.

  Bioinformation 20080101

• Stabilization of the genome of the mismatch repair deficient Mycobacterium tuberculosis by context-dependent codon choice.

  BMC genomics 20080101

• [Synthesis and characteristics of modified DNA fragments containing thymidine glycol residues].

  Bioorganicheskaia khimiia 20080101

• Compatible solute influence on nucleic acids: many questions but few answers.

  Saline systems 20080101

• Uracil within DNA: an actor of antiviral immunity.

  Retrovirology 20080101

• HDAC inhibitors act with 5-aza-2'-deoxycytidine to inhibit cell proliferation by suppressing removal of incorporated abases in lung cancer cells.

  PloS one 20080101

• Association of HMGB1 polymorphisms with outcome in patients with systemic inflammatory response syndrome.

  Critical care (London, England) 20080101

• Neurotrophic keratitis in a patient with dihydroxypyrimidine dehydrogenase deficiency.

  Indian journal of ophthalmology 20080101

• Evolutionary analyses of KCNQ1 and HERG voltage-gated potassium channel sequences reveal location-specific susceptibility and augmented chemical severities of arrhythmogenic mutations.

  BMC evolutionary biology 20080101

• The complete mitochondrial genome of the Antarctic springtail Cryptopygus antarcticus (Hexapoda: Collembola).

  BMC genomics 20080101

• Diverse roles of androgen receptor (AR) domains in AR-mediated signaling.

  Nuclear receptor signaling 20080101

• Variation in DNA methylation patterns of grapevine somaclones (Vitis vinifera L.).

  BMC plant biology 20080101

• Morphology and molecular phylogeny of a marine interstitial tetraflagellate with putative endosymbionts: Auranticordis quadriverberis n. gen. et sp. (Cercozoa).

  BMC microbiology 20080101

• Depletion of dimeric all-alpha dUTPase induces DNA strand breaks and impairs cell cycle progression in Trypanosoma brucei.

  The international journal of biochemistry & cell biology 20080101

• Early noninvasive prenatal detection of a fetal CRB1 mutation causing Leber congenital amaurosis.

  Molecular vision 20080101

• Bovine CD14 gene characterization and relationship between polymorphisms and surface expression on monocytes and polymorphonuclear neutrophils.

  BMC genetics 20080101

• Characterization of hemizygous deletions in citrus using array-comparative genomic hybridization and microsynteny comparisons with the poplar genome.

  BMC genomics 20080101

• Host and microbiological factors related to dental caries development.

  Caries research 20080101

• Reduced-representation methylation mapping.

  Genome biology 20080101

• Synthesis and properties of (alpha-P-borano)-nucleoside 5'-triphosphate analogues as potential antiviral agents.

  Nucleic acids symposium series (2004) 20080101

• Nucleoside diphosphate prodrugs.

  Nucleic acids symposium series (2004) 20080101

• Recognition of homopyrimidine mismatches by distance-constrained macrocyclic bisintercalators.

  Nucleic acids symposium series (2004) 20080101

• A pteridine derivative with electron-withdrawing groups for binding and sensing of nucleobases in AP site-containing DNA duplexes.

  Nucleic acids symposium series (2004) 20080101

• Effect of an alkyl amino group on the binding of 1,8-naphthyridines to AP site-containing DNA duplexes.

  Nucleic acids symposium series (2004) 20080101

• Competitive binding of small ligands to nucleobases in AP site-containing DNA duplexes.

  Nucleic acids symposium series (2004) 20080101

• A surface plasmon resonance sensor based on 3,5-diaminopyrazine with a high selectivity for thymine in AP site-containing DNA duplex.

  Nucleic acids symposium series (2004) 20080101

• Crystal structures of DNA duplexes stabilized by bicyclic-C residues.

  Nucleic acids symposium series (2004) 20080101

• Iso-thioacetamido nucleic acids (isoTANA): synthesis and DNA binding studies of lyxo/ribo oligonucleotides.

  Nucleic acids symposium series (2004) 20080101

• Synthesis of double-headed nucleosides with the additional nucleobase in the 5'-C-position.

  Nucleic acids symposium series (2004) 20080101

• Synthesis of a new internucleosidic linkage: the borononucleotides.

  Nucleic acids symposium series (2004) 20080101

• Synthesis and properties of covalently linked antiparallel and parallel DNA duplexes.

  Nucleic acids symposium series (2004) 20080101

• Reactivity of thymine doublet in single strand DNA with osmium reagent.

  Nucleic acids symposium series (2004) 20080101

• Stereoselective formation of a cyclobutane pyrimidine dimer by using N4-acetyl protection of the cytosine base.

  Nucleic acids symposium series (2004) 20080101

• Base recognition abilities of 2'-deoxynucleoside N-oxide derivatives and their substrate specificity in enzyme reaction.

  Nucleic acids symposium series (2004) 20080101

• Synthesis and antiviral evaluation of (+/-)-4'-ethynyl-5'-difluorocarbocyclic-d4T analogue.

  Nucleic acids symposium series (2004) 20080101

• Synthesis of novel cyclopropyl nucleoside analogues as potential antiherpetic agent.

  Nucleic acids symposium series (2004) 20080101

• Thymidine phoshorylase as a target for antiangiogenesis treatment.

  Nucleic acids symposium series (2004) 20080101

• Pyrimidine acyclic nucleoside phosphonates and phosphorylated analogs. Part 2. Syntheses and investigation of their inhibitory effects towards human thymidine phosphorylase.

  Nucleic acids symposium series (2004) 20080101

• Molecular analysis of the PAX6 gene in Mexican patients with congenital aniridia: report of four novel mutations.

  Molecular vision 20080101

• Genome-wide analysis of natural selection on human cis-elements.

  PloS one 20080101

• Kismeth: analyzer of plant methylation states through bisulfite sequencing.

  BMC bioinformatics 20080101

• Epigenetic and phenotypic changes result from a continuous pre and post natal dietary exposure to phytoestrogens in an experimental population of mice.

  BMC physiology 20080101

• PCA-HPR: a principle component analysis model for human promoter recognition.

  Bioinformation 20080101

• Cross chromosomal similarity for DNA sequence compression.

  Bioinformation 20080101

• TMZ-BioShuttle--a reformulated temozolomide.

  International journal of medical sciences 20080101

• Phosphorescent thymidine triphosphate sensor based on a donor-acceptor ensemble system using intermolecular energy transfer.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20080101

• Methylenetetrahydrofolate reductase, common polymorphisms, and relation to disease.

  Vitamins and hormones 20080101

• Experimental observations of rapid Maize streak virus evolution reveal a strand-specific nucleotide substitution bias.

  Virology journal 20080101

• Effect of the assignment of ancestral CpG state on the estimation of nucleotide substitution rates in mammals.

  BMC evolutionary biology 20080101

• Ubiquitous water-soluble molecules in aquatic plant exudates determine specific insect attraction.

  PloS one 20080101

• Preferred and avoided codon pairs in three domains of life.

  BMC genomics 20080101

• Prediction of TF target sites based on atomistic models of protein-DNA complexes.

  BMC bioinformatics 20080101

• Did RNA editing in plant organellar genomes originate under natural selection or through genetic drift?

  Biology direct 20080101

• Probe signal correction for differential methylation hybridization experiments.

  BMC bioinformatics 20080101

• [Study of spectral and luminescent manifestations of the aggregation of thymine chromophores in aqueous solutions of polythymidylic acid at room temperature in connection with the task of photochemical record of information on thymine].

  Biofizika 20080101

• High-fidelity correction of genomic uracil by human mismatch repair activities.

  BMC molecular biology 20080101

• Identification of novel single nucleotide polymorphisms in inflammatory genes as risk factors associated with trachomatous trichiasis.

  PloS one 20080101

• Sequence specificity of BAL 31 nuclease for ssDNA revealed by synthetic oligomer substrates containing homopolymeric guanine tracts.

  PloS one 20080101

• A novel cloning strategy for isolating, genotyping and phenotyping genetic variants of geminiviruses.

  Virology journal 20080101

• Effects of the lactase 13910 C/T and calcium-sensor receptor A986S G/T gene polymorphisms on the incidence and recurrence of colorectal cancer in Hungarian population.

  BMC cancer 20080101

• The cytosol activity of thymidine phosphorylase in endometrial cancer.

  Journal of experimental & clinical cancer research : CR 20080101

• A new 500 kb haplotype associated with high CD8+ T-lymphocyte numbers predicts a less severe expression of hereditary hemochromatosis.

  BMC medical genetics 20080101

• The impact of close surveillance on pregnancy outcome among women with a prior history of antepartum complications attributed to thrombosis: a cohort study.

  Reproductive biology and endocrinology : RB&E 20080101

• Properties of non-coding DNA and identification of putative cis-regulatory elements in Theileria parva.

  BMC genomics 20080101

• Survival in nuclear waste, extreme resistance, and potential applications gleaned from the genome sequence of Kineococcus radiotolerans SRS30216.

  PloS one 20080101

• Mononucleotide repeats are asymmetrically distributed in fungal genes.

  BMC genomics 20080101

• Dihydropyrimidine dehydrogenase deficiency presenting with psychomotor retardation in the first Polish patient.

  Acta biochimica Polonica 20080101

• Influence of Nitrogen Source on 2,4-diacetylphloroglucinol Production by the Biocontrol Strain Pf-5.

  The open microbiology journal 20080101

• Correlation of the recurrent FBN1 mutation (c.364C>T) with a unique phenotype in a Chinese patient with Marfan syndrome.

  Japanese journal of ophthalmology 20080101

• VarDetect: a nucleotide sequence variation exploratory tool.

  BMC bioinformatics 20080101

• Core promoters are predicted by their distinct physicochemical properties in the genome of Plasmodium falciparum.

  Genome biology 20080101

• Strong association of a common dihydropyrimidine dehydrogenase gene polymorphism with fluoropyrimidine-related toxicity in cancer patients.

  PloS one 20080101

• A DNA topoisomerase IB in Thaumarchaeota testifies for the presence of this enzyme in the last common ancestor of Archaea and Eucarya.

  Biology direct 20080101

• Thymidylate synthase, dihydropyrimidine dehydrogenase, ERCC1, and thymidine phosphorylase gene expression in primary and metastatic gastrointestinal adenocarcinoma tissue in patients treated on a phase I trial of oxaliplatin and capecitabine.

  BMC cancer 20080101

• Human polycomb 2 protein is a SUMO E3 ligase and alleviates substrate-induced inhibition of cystathionine beta-synthase sumoylation.

  PloS one 20080101

• Identification of STRA6 and SKI sequence variants in patients with anophthalmia/microphthalmia.

  Molecular vision 20080101

• [Uracil-DNA glycosylases].

  Postepy biochemii 20080101

• IDE Gene Polymorphism Influences on BPSD in Mild Dementia of Alzheimer's Type.

  Current gerontology and geriatrics research 20080101

• DNA and RNA analyses in detection of genetic predisposition to cancer.

  Hereditary cancer in clinical practice 20080101

• The G16319A substitution frequency in a hemorrhagic stroke.

  Annals of Indian Academy of Neurology 20080101

• Treatment of glioblastoma multiforme cells with temozolomide-BioShuttle ligated by the inverse Diels-Alder ligation chemistry.

  Drug design, development and therapy 20080101

• (2Z,6Z)-N,N-Bis(2,6-diisopropyl-phen-yl)-N,N-bis-(2-methoxy-ethyl)pyridine-2,6-dicarboxamidine.

  Acta crystallographica. Section E, Structure reports online 20080101

• Mir-434-5p mediates skin whitening and lightening.

  Clinical, cosmetic and investigational dermatology 20080101

• Stepwise interfacial self-assembly of nanoparticles via specific DNA pairing.

  Physical chemistry chemical physics : PCCP 20071228

• Structure and dynamics of poly(T) single-strand DNA: implications toward CPD formation.

  The journal of physical chemistry. B 20071227

• Vibronic transitions in large molecular systems: rigorous prescreening conditions for Franck-Condon factors.

  The Journal of chemical physics 20071221

• Amplification of 4'-thioDNA in the presence of 4'-thio-dTTP and 4'-thio-dCTP, and 4'-thioDNA-directed transcription in vitro and in mammalian cells.

  Journal of the American Chemical Society 20071219

• Structure and activity of Y-class DNA polymerase DPO4 from Sulfolobus solfataricus with templates containing the hydrophobic thymine analog 2,4-difluorotoluene.

  The Journal of biological chemistry 20071214

• Role of Y94 in proton and hydride transfers catalyzed by thymidylate synthase.

  Biochemistry 20071211

• Crystal structures of yeast beta-alanine synthase complexes reveal the mode of substrate binding and large scale domain closure movements.

  The Journal of biological chemistry 20071207

• Transcription factor E is a part of transcription elongation complexes.

  The Journal of biological chemistry 20071207

• Photodissociation of uracil.

  Physical chemistry chemical physics : PCCP 20071207

• Steric and electrostatic effects in DNA synthesis by the SOS-induced DNA polymerases II and IV of Escherichia coli.

  Biochemistry 20071204

• Mitochondria as determinant of nucleotide pools and chromosomal stability.

  Mutation research 20071201

• A meta-analysis of association between C677T polymorphism in the methylenetetrahydrofolate reductase gene and hypertension.

  European journal of human genetics : EJHG 20071201

• Pi-pi stacking tackled with density functional theory.

  Journal of molecular modeling 20071201

• Measurement of the incorporation and repair of exogenous 5-hydroxymethyl-2'-deoxyuridine in human cells in culture using gas chromatography-negative chemical ionization-mass spectrometry.

  Chemical research in toxicology 20071201

• Effect of the preparation procedure on the structural properties of oligonucleotide/cationic liposome complexes (lipoplexes) studied by electron spin resonance and Zeta potential.

  Biophysical chemistry 20071201

• BRCA1 and BRCA2 germline mutation analysis in the Indonesian population.

  Breast cancer research and treatment 20071201

• Probing the hierarchy of thymine-thymine interactions in self-assembled structures by manipulation with scanning tunneling microscopy.

  Small (Weinheim an der Bergstrasse, Germany) 20071201

• Combined analysis of galectin-3 and BRAFV600E improves the accuracy of fine-needle aspiration biopsy with cytological findings suspicious for papillary thyroid carcinoma.

  Endocrine-related cancer 20071201

• 5-Fluorouracil is efficiently removed from DNA by the base excision and mismatch repair systems.

  Gastroenterology 20071201

• Association of methylenetetrahydrofolate reductase genetic polymorphisms with atlantoaxial dislocation.

  Journal of neurosurgery. Spine 20071201

• The thuggacins, novel antibacterial macrolides from Sorangium cellulosum acting against selected Gram-positive bacteria.

  The Journal of antibiotics 20071201

• Binding of superoxide-modified DNA by cancer antibodies.

  Journal of experimental & clinical cancer research : CR 20071201

• Mitochondrial thymidine kinase and the enzymatic network regulating thymidine triphosphate pools in cultured human cells.

  The Journal of biological chemistry 20071130

• Predicting protein function from structure--the roles of short-chain dehydrogenase/reductase enzymes in Bordetella O-antigen biosynthesis.

  Journal of molecular biology 20071130

• The obesity-associated FTO gene encodes a 2-oxoglutarate-dependent nucleic acid demethylase.

  Science (New York, N.Y.) 20071130

• Modeling thymine photodimerizations in DNA: mechanism and correlation diagrams.

  Journal of the American Chemical Society 20071128

• Synthesis and characterization of iridium(III) cyclometalated complexes with oligonucleotides: insights into redox reactions with DNA.

  Inorganic chemistry 20071126

• Conformational change induced by metal-ion-binding to DNA containing the artificial 1,2,4-triazole nucleoside.

  Inorganic chemistry 20071126

• Electronic structure of adenine and thymine base pairs studied by femtosecond electron-ion coincidence spectroscopy.

  The journal of physical chemistry. A 20071122

• Colloid stability of thymine-functionalized gold nanoparticles.

  Langmuir : the ACS journal of surfaces and colloids 20071120

• Detection of a mixed infection of a novel Cryptosporidium andersoni and its subgenotype in Japanese cattle.

  Veterinary parasitology 20071110

• Photoelectron spectroscopy of adiabatically bound valence anions of rare tautomers of the nucleic acid bases.

  The Journal of chemical physics 20071107

• In vivo formation and in vitro replication of a guanine-thymine intrastrand cross-link lesion.

  Biochemistry 20071106

• Surface-initiated enzymatic polymerization of DNA.

  Langmuir : the ACS journal of surfaces and colloids 20071106

• Temozolomide induces senescence but not apoptosis in human melanoma cells.

  British journal of cancer 20071105

• The relationship of the methylenetetrahydrofolate reductase C677T gene polymorphism in Turkish type 2 diabetic patients with and without nephropathy.

  Diabetes/metabolism research and reviews 20071101

• Ultraviolet Raman study of thymine on the Au electrode.

  Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy 20071101

• JBP2, a SWI2/SNF2-like protein, regulates de novo telomeric DNA glycosylation in bloodstream form Trypanosoma brucei.

  Molecular and biochemical parasitology 20071101

• An effective method for the in situ synthesis of DNA-CPG conjugates using chemical ligation technology as tools for SNP analysis.

  Bioorganic & medicinal chemistry letters 20071101

• Rational design of 5'-thiourea-substituted alpha-thymidine analogues as thymidine monophosphate kinase inhibitors capable of inhibiting mycobacterial growth.

  Journal of medicinal chemistry 20071101

• RutR is the uracil/thymine-sensing master regulator of a set of genes for synthesis and degradation of pyrimidines.

  Molecular microbiology 20071101

• Benhamycin, novel alkaloid from terrestrial Streptomyces sp.

  Natural product research 20071101

• Mutation of RNA Pol III subunit rpc2/polr3b Leads to Deficiency of Subunit Rpc11 and disrupts zebrafish digestive development.

  PLoS biology 20071101

• Changes to the HIV long terminal repeat and to HIV integrase differentially impact HIV integrase assembly, activity, and the binding of strand transfer inhibitors.

  The Journal of biological chemistry 20071026

• Spectrophotometric and calorimetric titration studies on molecular recognition of camphor and borneol by nucleobase-modified beta-cyclodextrins.

  The journal of physical chemistry. B 20071025

• A recurrent FBN1 mutation in an autosomal dominant ectopia lentis family of Indian origin.

  Molecular vision 20071025

• Infrared spectra of protonated uracil, thymine and cytosine.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20071022

• On the intrinsic population of the lowest triplet state of thymine.

  The journal of physical chemistry. B 20071018

• Quantification of zidovudine and its monophosphate in cell extracts by on-line solid-phase extraction coupled to liquid chromatography.

  Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 20071015

• [Metabolic bone disease in premature infants and genetic polymorphisms].

  Orvosi hetilap 20071014

• The origin of deficiency of the supermolecule second-order Moller-Plesset approach for evaluating interaction energies.

  The Journal of chemical physics 20071014

• Base flipping of the thymine dimer in duplex DNA.

  The journal of physical chemistry. B 20071011

• Increased cyclooxygenase expression and thymine dimer formation after repeated exposures of humans to low doses of solar simulated radiation.

  Experimental dermatology 20071001

• Triazene compounds: mechanism of action and related DNA repair systems.

  Pharmacological research 20071001

• Crystallization and preliminary X-ray data analysis of beta-alanine synthase from Drosophila melanogaster.

  Acta crystallographica. Section F, Structural biology and crystallization communications 20071001

• [Micro-Raman spectra for gastritis and gastric ulcer tissues].

  Guang pu xue yu guang pu fen xi = Guang pu 20071001

• Enzymatic capture of an extrahelical thymine in the search for uracil in DNA.

  Nature 20070927

• Excision of 5-halogenated uracils by human thymine DNA glycosylase. Robust activity for DNA contexts other than CpG.

  The Journal of biological chemistry 20070921

• Determination of purine and pyrimidine bases in natural and cultured Cordyceps using optimum acid hydrolysis followed by high performance liquid chromatography.

  Journal of pharmaceutical and biomedical analysis 20070921

• *H atom and *OH radical reactions with 5-methylcytosine.

  The journal of physical chemistry. A 20070920

• Metal-mediated J coupling in DNA base pairs: relativistic DFT predictions.

  Journal of the American Chemical Society 20070919

• [Myotubular myopathy. Case report and review of the literature].

  Orvosi hetilap 20070916

• Fast simultaneous determination of 14 nucleosides and nucleobases in cultured Cordyceps using ultra-performance liquid chromatography.

  Talanta 20070915

• DFT study on the nucleophilic addition reaction of water and ammonia to the thymine radical cation.

  The journal of physical chemistry. A 20070913

• Ultrafast deactivation channel for thymine dimerization.

  Journal of the American Chemical Society 20070912

• Concentrations of zidovudine- and lamivudine-triphosphate according to cell type in HIV-seronegative adults.

  AIDS (London, England) 20070912

• In vitro evaluation of cancer-specific NF-kappaB-CEA enhancer-promoter system for 5-fluorouracil prodrug gene therapy in colon cancer cell lines.

  British journal of cancer 20070911

• A novel mutation in major intrinsic protein of the lens gene (MIP) underlies autosomal dominant cataract in a Chinese family.

  Molecular vision 20070911

• A novel mutation in the connexin 46 (GJA3) gene associated with autosomal dominant congenital cataract in an Indian family.

  Molecular vision 20070911

• Identification of mutations in the myocilin (MYOC) gene in Taiwanese patients with juvenile-onset open-angle glaucoma.

  Molecular vision 20070910

• Homologous recombination repair is regulated by domains at the N- and C-terminus of NBS1 and is dissociated with ATM functions.

  Oncogene 20070906

• The GNB3 C825T polymorphism affects response to HCV therapy with pegylated interferon in HCV/HIV co-infected but not in HCV mono-infected patients.

  Journal of hepatology 20070901

• Deoxyribonucleic acid methyl transferases 3a and 3b associate with the nuclear orphan receptor COUP-TFI during gene activation.

  Molecular endocrinology (Baltimore, Md.) 20070901

• Characterization of chromatin modified with reactive oxygen species: recognition by autoantibodies in cancer.

  Clinical biochemistry 20070901

• Interaction of P53 Arg72Pro and MDM2 T309G polymorphisms and their associations with risk of gastric cardia cancer.

  Carcinogenesis 20070901

• Recombinant Schizosaccharomyces pombe Nth1 protein exhibits DNA glycosylase activities for 8-oxo-7,8-dihydroguanine and thymine residues oxidized in the methyl group.

  Journal of radiation research 20070901

• Investigation of functional gene polymorphisms interleukin-1beta, interleukin-6, interleukin-10 and tumor necrosis factor in individuals with oral lichen planus.

  Journal of oral pathology & medicine : official publication of the International Association of Oral Pathologists and the American Academy of Oral Pathology 20070901

• [A novel mutation of PRSS1 gene in a Chinese hereditary pancreatitis family].

  Yi chuan = Hereditas 20070901

• Gastrointestinal amyloidosis associated with transthyretin Phe64Ser mutation.

  The American journal of the medical sciences 20070901

• Differences in substrate specificity of C(5)-substituted or C(5)-unsubstituted pyrimidine nucleotides by DNA polymerases from thermophilic bacteria, archaea, and phages.

  Chemistry & biodiversity 20070901

• A computational approach to the functional screening of genomes.

  PLoS computational biology 20070901

• The expression of thymidine phosphorylase in cancer-infiltrating inflammatory cells in stomach cancer.

  Journal of Korean medical science 20070901

• Genomics-based drug design targets the AT-rich malaria parasite: implications for antiparasite chemotherapy.

  Pharmacogenomics 20070901

• Inactivation of Staphylococcus aureus in milk using flow-through pulsed UV-light treatment system.

  Journal of food science 20070901

• MDR1 polymorphisms effect cyclosporine AUC0-4 values in Behçet's disease patients.

  Clinical ophthalmology (Auckland, N.Z.) 20070901

• Strand-biased spreading of mutations during somatic hypermutation.

  Science (New York, N.Y.) 20070831

• Molecular and phenotypic analysis of a family with autosomal recessive cone-rod dystrophy and Stargardt disease.

  Molecular vision 20070831

• Ab initio molecular dynamics and time-resolved photoelectron spectroscopy of electronically excited uracil and thymine.

  The journal of physical chemistry. A 20070830

• Synthesis and surface structure of thymine-functionalized, self-assembled monolayer-protected gold nanoparticles.

  Langmuir : the ACS journal of surfaces and colloids 20070828

• Interaction of low-energy electrons with the pyrimidine bases and nucleosides of DNA.

  The Journal of chemical physics 20070828

• Density functional theory-symmetry adapted perturbation treatment energy decomposition of nucleic acid base pairs taken from DNA crystal geometry.

  The Journal of chemical physics 20070821

• Nucleosome positioning determinants.

  Journal of molecular biology 20070817

• Formulations of biodegradable Nanogel carriers with 5'-triphosphates of nucleoside analogs that display a reduced cytotoxicity and enhanced drug activity.

  Journal of controlled release : official journal of the Controlled Release Society 20070816

• Fluorescence of the DNA double helix (dA)20 x (dT)20 studied by femtosecond spectroscopy--effect of the duplex size on the properties of the excited states.

  The journal of physical chemistry. B 20070816

• Exomethylene pyranonucleosides: efficient synthesis and biological evaluation of 1-(2,3,4-trideoxy-2-methylene-beta-d-glycero-hex-3-enopyranosyl)thymine.

  Bioorganic & medicinal chemistry 20070815

• Synthesis, anti-HIV activity, and resistance profile of thymidine phosphonomethoxy nucleosides and their bis-isopropyloxymethylcarbonyl (bisPOC) prodrugs.

  Bioorganic & medicinal chemistry 20070815

• NMR investigation of primer-template models: structural effect of sequence downstream of a thymine template on mutagenesis in DNA replication.

  Biochemistry 20070814

• Enzymatic synthesis of dTDP-4-amino-4,6-dideoxy-D-glucose using GerB (dTDP-4-keto-6-deoxy-D-glucose aminotransferase).

  Carbohydrate research 20070813

• Vacuum-ultraviolet photoionization studies of the microhydration of DNA bases (guanine, cytosine, adenine, and thymine).

  The journal of physical chemistry. A 20070809

• CH/pi interactions in DNA and proteins. A theoretical study.

  The journal of physical chemistry. B 20070809

• Dinucleotide TpT and its 2'-O-Me analogue possess different backbone conformations and flexibilities but similar stacked geometries.

  The journal of physical chemistry. B 20070809

• Molecular architecture of DesI: a key enzyme in the biosynthesis of desosamine.

  Biochemistry 20070807

• Impact of the sulfonylurea receptor 1 (SUR1) exon 16-3c/t polymorphism on acute hyperglycaemia in type 2 diabetic patients.

  Diabetes research and clinical practice 20070801

• MTHFR 677 CT/MTHFR 1298 CC genotypes are associated with increased risk of hypertension in Indians.

  Molecular and cellular biochemistry 20070801

• Vitamin D 1alpha-hydroxylase gene mutations in patients with 1alpha-hydroxylase deficiency.

  The Journal of clinical endocrinology and metabolism 20070801

• A Toll-like receptor 7 single nucleotide polymorphism protects from advanced inflammation and fibrosis in male patients with chronic HCV-infection.

  Journal of hepatology 20070801

• Partial purification and characterization of DNA polymerase beta-like enzyme from Plasmodium falciparum.

  Molecular and biochemical parasitology 20070801

• Suppression and enhancement of secondary ion formation due to the chemical environment in static-secondary ion mass spectrometry.

  Journal of the American Society for Mass Spectrometry 20070801

• Functional -1562 C-to-T polymorphism in matrix metalloproteinase-9 (MMP-9) promoter is associated with the risk for oral squamous cell carcinoma in younger male areca users.

  Journal of oral pathology & medicine : official publication of the International Association of Oral Pathologists and the American Academy of Oral Pathology 20070801

• The endothelial nitric oxide synthase gene -786T/C polymorphism is a predictive factor for reattacks of coronary spasm.

  Pharmacogenetics and genomics 20070801

• Nucleotide content gradients in maternally and paternally inherited mitochondrial genomes of the mussel Mytilus.

  Journal of molecular evolution 20070801

• Detection of phosphodiester adducts formed by the reaction of benzo[a]pyrene diol epoxide with 2'-deoxynucleotides using collision-induced dissociation electrospray ionization tandem mass spectrometry.

  Nucleic acids research 20070801

• At the crossroad of thiamine degradation and biosynthesis.

  Nature chemical biology 20070801

• Regulation of dCTP deaminase from Escherichia coli by nonallosteric dTTP binding to an inactive form of the enzyme.

  The FEBS journal 20070801

• Probing nonnucleoside inhibitor-induced active-site distortion in HIV-1 reverse transcriptase by transient kinetic analyses.

  Protein science : a publication of the Protein Society 20070801

• Spy1 enhances phosphorylation and degradation of the cell cycle inhibitor p27.

  Cell cycle (Georgetown, Tex.) 20070801

• Electronic spectra, excited state structures and interactions of nucleic acid bases and base assemblies: a review.

  Journal of biomolecular structure & dynamics 20070801

• What is radiation's true target?

  Environmental health perspectives 20070801

• Biochemical and biological properties of DNA photolyases derived from utraviolet-sensitive rice cultivars.

  Genes & genetic systems 20070801

• Qualitative and quantitative analyses of nucleosides and nucleobases in Ganoderma spp. by HPLC-DAD-MS.

  Journal of pharmaceutical and biomedical analysis 20070727

• Rationally designed dual inhibitors of HIV reverse transcriptase and integrase.

  Journal of medicinal chemistry 20070726

• Synthesis of rigid homo- and heteroditopic nucleobase-terminated molecules incorporating adenine and/or thymine.

  Organic letters 20070719

• Polarizable model potential function for nucleic acid bases.

  Journal of computational chemistry 20070715

• Association of methylenetetrahydrofolate reductase polymorphism and the risk of squamous cell carcinoma in renal transplant patients.

  Transplantation 20070715

• A novel metal-binding mode of thymine nucleobases: N3 and O4 chelation.

  Inorganic chemistry 20070709

• Anion photoelectron imaging of deprotonated thymine and cytosine.

  Physical chemistry chemical physics : PCCP 20070707

• Preliminary evidence for involvement of the folate gene polymorphism 19bp deletion-DHFR in occurrence of autism.

  Neuroscience letters 20070705

• Active site dynamics and combined quantum mechanics/molecular mechanics (QM/MM) modelling of a HIV-1 reverse transcriptase/DNA/dTTP complex.

  Journal of molecular graphics & modelling 20070701

• Complement factor H polymorphism in age-related macular degeneration.

  Ophthalmology 20070701

• Genetic analysis of the PAX8 gene in children with congenital hypothyroidism and dysgenetic or eutopic thyroid glands: identification of a novel sequence variant.

  Clinical endocrinology 20070701

• A polymorphism in the type one complement receptor (CR1) involves an additional cysteine within the C3b/C4b binding domain that inhibits ligand binding.

  Molecular immunology 20070701

• Improvement of base selectivity and binding affinity by controlling hydrogen bonding motifs between nucleobases and isoxanthopterin: application to the detection of T/C mutation.

  Bioorganic & medicinal chemistry letters 20070701

• Arginine (CGC) codon targeting in the human prostacyclin receptor gene (PTGIR) and G-protein coupled receptors (GPCR).

  Gene 20070701

• The angiogenic factor thymidine phosphorylase up-regulates the cell adhesion molecule P-selectin in human vascular endothelial cells and is associated with P-selectin expression in breast cancers.

  The Journal of pathology 20070701

• Genomic survey of sequence features for ultraviolet tolerance in Haloarchaea (family Halobacteriaceae).

  Genomics 20070701

• Association of CD14, IL1B, IL6, IL10 and TNFA functional gene polymorphisms with symptomatic dental abscesses.

  International endodontic journal 20070701

• Mitotic control of dTTP pool: a necessity or coincidence?

  Journal of biomedical science 20070701

• Effect of C111T polymorphism in exon 9 of the catalase gene on blood catalase activity in different types of diabetes mellitus.

  Free radical research 20070701

• Alpha1A-adrenoceptors predominate in the control of blood pressure in mouse mesenteric vascular bed.

  Autonomic & autacoid pharmacology 20070701

• DNA damage, homology-directed repair, and DNA methylation.

  PLoS genetics 20070701

• Intraspecies diversity of the industrial yeast strains Saccharomyces cerevisiae and Saccharomyces pastorianus based on analysis of the sequences of the internal transcribed spacer (ITS) regions and the D1/D2 region of 26S rDNA.

  Bioscience, biotechnology, and biochemistry 20070701

• The x-ray structure of dTDP-4-keto-6-deoxy-D-glucose-3,4-ketoisomerase.

  The Journal of biological chemistry 20070629

• Specific recognition of a DNA immunogen by its elicited antibody.

  Journal of molecular biology 20070629

• Triplet excited fluoroquinolones as mediators for thymine cyclobutane dimer formation in DNA.

  The journal of physical chemistry. B 20070628

• Quantum-chemical investigation of the structures and electronic spectra of the nucleic acid bases at the coupled cluster CC2 level.

  The journal of physical chemistry. A 20070628

• Core-bound polymeric micellar system based on photocrosslinking of thymine.

  Chemical communications (Cambridge, England) 20070628

• One-electron photooxidation and site-selective strand cleavage at 5-methylcytosine in DNA by sensitization with 2-methyl-1,4-naphthoquinone-tethered oligonucleotides.

  Journal of the American Chemical Society 20070627

• Chemical and structural implications of 1',2'- versus 2',4'- conformational constraints in the sugar moiety of modified thymine nucleosides.

  The Journal of organic chemistry 20070622

• Initial excited-state structural dynamics of thymine are coincident with the expected photochemical dynamics.

  The journal of physical chemistry. A 20070621

• DNA polymerases eta and theta function in the same genetic pathway to generate mutations at A/T during somatic hypermutation of Ig genes.

  The Journal of biological chemistry 20070615

• Defects in maintenance of mitochondrial DNA are associated with intramitochondrial nucleotide imbalances.

  Human molecular genetics 20070615

• Probing ligand binding to duplex DNA using KMnO4 reactions and electrospray ionization tandem mass spectrometry.

  Analytical chemistry 20070615

• Silencing of xenogeneic DNA by H-NS-facilitation of lateral gene transfer in bacteria by a defense system that recognizes foreign DNA.

  Genes & development 20070615

• Structural modeling of sequence specificity by an autoantibody against single-stranded DNA.

  Biochemistry 20070612

• Breast cancer risk associated with AURKA 91T -->A polymorphism in relation to BRCA mutations.

  Cancer letters 20070608

• The energetics of i-DNA tetraplex structures formed intermolecularly by d(TC5) and intramolecularly by d[(C5T3)3C5].

  Biopolymers 20070605

• Identification, transcriptional and phylogenetic analysis of the DNA polymerase gene of Pieris rapae granulovirus.

  Virus genes 20070601

• RNA polymerase II bypasses 8-oxoguanine in the presence of transcription elongation factor TFIIS.

  DNA repair 20070601

• New aspects of the fragmentation mechanisms of unmodified and methylphosphonate-modified oligonucleotides.

  Journal of the American Society for Mass Spectrometry 20070601

• Clinical, biochemical and genetic findings in two siblings with a dihydropyrimidinase deficiency.

  Molecular genetics and metabolism 20070601

• Porous imprinted polymer membranes prepared by phase separation in compressed liquid CO2.

  Analytical and bioanalytical chemistry 20070601

• Association between the T-381C polymorphism of the brain natriuretic peptide gene and risk of type 2 diabetes in human populations.

  Human molecular genetics 20070601

• Fenofibrate effect on triglyceride and postprandial response of apolipoprotein A5 variants: the GOLDN study.

  Arteriosclerosis, thrombosis, and vascular biology 20070601

• Complementation of an E. coli cysteine auxotrophic mutant for the structural modification study of 3'(2'),5'-bisphosphate nucleotidase.

  Biotechnology letters 20070601

• Single-nucleotide polymorphisms in the IL-4 and IL-13 promoter region in aggressive periodontitis.

  Journal of clinical periodontology 20070601

• On translocation mechanism of ring-shaped helicase along single-stranded DNA.

  Biochimica et biophysica acta 20070601

• Packing features of the all-AT oligonucleotide d(AAATTT).

  Journal of biomolecular structure & dynamics 20070601

• Assessing substitution variation across sites in grass chloroplast DNA.

  Journal of molecular evolution 20070601

• Reactivity of ferrocenylcarbodiimide with DNA duplex containing single-mismatched base pairs.

  Analytical sciences : the international journal of the Japan Society for Analytical Chemistry 20070601

• First observation of luminescence from tris(2,2'-bipyridine)ruthenium(II) triggered by anodic oxidation of oligodeoxyribonucleotide.

  Analytical sciences : the international journal of the Japan Society for Analytical Chemistry 20070601

• [Studies on chemical constitutes of Acantophora spicifera].

  Zhongguo Zhong yao za zhi = Zhongguo zhongyao zazhi = China journal of Chinese materia medica 20070601

• [Studies on chemical constituents of marine bryozoan Bugula neritina L].

  Zhong yao cai = Zhongyaocai = Journal of Chinese medicinal materials 20070601

• Tip-enhanced Raman spectra of picomole quantities of DNA nucleobases at Au(111).

  Journal of the American Chemical Society 20070530

• Intercalation of fac-[(4,4'-bpy)ReI(CO)3(dppz)]+, dppz = dipyridyl[3,2-a:2'3'-c]phenazine, in polynucleotides. On the UV-vis photophysics of the Re(I) intercalator and the redox reactions with pulse radiolysis-generated radicals.

  Dalton transactions (Cambridge, England : 2003) 20070528

• Effect of Ni(ii), Cu(ii) and Zn(ii) association on the keto-enol tautomerism of thymine in the gas phase.

  Physical chemistry chemical physics : PCCP 20070528

• Polymorphisms of multidrug resistance gene (MDR1) and cyclosporine absorption in de novo renal transplant patients.

  Transplantation 20070527

• Human polymorphic variants of the NEIL1 DNA glycosylase.

  The Journal of biological chemistry 20070525

• Modulation of MutS ATP-dependent functional activities by DNA containing a cisplatin compound lesion (base damage and mismatch).

  Journal of molecular biology 20070525

• Density functional study toward understanding dehydrogenation of the adenine-thymine base pair and its anion.

  The journal of physical chemistry. A 20070524

• Probing thymine with laser ablation molecular beam Fourier transform microwave spectroscopy.

  The Journal of chemical physics 20070521

• Ab initio base-pairing energies of an oxidized thymine product, 5-formyluracil, with standard DNA bases at the BSSE-free DFT and MP2 theory levels.

  Organic & biomolecular chemistry 20070521

• Synthesis and modelling of DNA junction and minor groove zipper motifs incorporating the double-headed nucleoside 5'(S)-C-(thymine-1-ylmethyl)thymidine.

  Organic & biomolecular chemistry 20070521

• Hydrogen-abstracted adenine-thymine radicals with interesting transferable properties.

  The journal of physical chemistry. B 20070517

• 2-Aminopurine flipped into the active site of the adenine-specific DNA methyltransferase M.TaqI: crystal structures and time-resolved fluorescence.

  Journal of the American Chemical Society 20070516

• Lesion specificity in the base excision repair enzyme hNeil1: modeling and dynamics studies.

  Biochemistry 20070508

• Efficient and erroneous incorporation of oxidized DNA precursors by human DNA polymerase eta.

  Biochemistry 20070508

• Synthesis of the four 1-(1-deoxy-D-pentitol-1-yl)thymines and conformational properties of the acyclic sugar chain.

  Carbohydrate research 20070507

• Electrochemical response of oligonucleotides on carbon paste electrode.

  Bioelectrochemistry (Amsterdam, Netherlands) 20070501

• Biochemical applications of surface-enhanced infrared absorption spectroscopy.

  Analytical and bioanalytical chemistry 20070501

• Identification of a novel mutation in the enamalin gene in a family with autosomal-dominant amelogenesis imperfecta.

  Archives of oral biology 20070501

• An efficient synthesis of 3-fluoro-5-thio-xylofuranosyl nucleosides of thymine, uracil, and 5-fluorouracil as potential antitumor or/and antiviral agents.

  Bioorganic & medicinal chemistry 20070501

• Effect of ultraviolet (UV) A, UVB or ionizing radiation on the cell cycle of human melanoma cells.

  The British journal of dermatology 20070501

• Methylenetetrahydrofolate reductase C677T mutation and nonalcoholic fatty liver disease.

  Digestive diseases and sciences 20070501

• Age-related changes in echocardiographic measurements: association with variation in the estrogen receptor-alpha gene.

  Hypertension (Dallas, Tex. : 1979) 20070501

• Solution structure and dynamics of DNA duplexes containing the universal base analogues 5-nitroindole and 5-nitroindole 3-carboxamide.

  Nucleic acids research 20070501

• Strong linkage disequilibrium and association of -1131T>C and c.553G>T polymorphisms of the apolipoprotein A5 gene with hypertriglyceridemia in a Japanese population.

  Circulation journal : official journal of the Japanese Circulation Society 20070501

• Low prevalence of p53, p16(INK4a) and Ha-ras tumour-specific mutations in low-graded actinic keratosis.

  The British journal of dermatology 20070501

• Transforming growth factor beta1 gene polymorphism 509C/T in deep infiltrating endometriosis.

  Reproductive sciences (Thousand Oaks, Calif.) 20070501

• Estimation on the individual hydrogen-bond strength in molecules with multiple hydrogen bonds.

  The journal of physical chemistry. A 20070419

• Is a thymine dimer replicated via a transient abasic site intermediate? A comparative study using non-natural nucleotides.

  Biochemistry 20070417

• Computation of large systems with an economic basis set: structures and reactivity indices of nucleic acid base pairs from density functional theory.

  Journal of computational chemistry 20070415

• Electronic coupling in the excited electronic state of stacked DNA base homodimers.

  Physical chemistry chemical physics : PCCP 20070414

• A novel fruitfly protein under developmental control degrades uracil-DNA.

  Biochemical and biophysical research communications 20070413

• Enzymatically activated cycloSal-d4T-monophosphates: The third generation of cycloSal-pronucleotides.

  Journal of medicinal chemistry 20070405

• Infrared laser spectroscopy of uracil and thymine in helium nanodroplets: vibrational transition moment angle study.

  The journal of physical chemistry. A 20070405

• Are isolated nucleic acid bases really planar? A Car-Parrinello molecular dynamics study.

  The journal of physical chemistry. B 20070405

• Characterization and mechanism of formation of tandem lesions in DNA by a nucleobase peroxyl radical.

  Journal of the American Chemical Society 20070404

• Do allelic variants of the connexin37 1019 gene polymorphism differentially predict for coronary artery disease and myocardial infarction?

  Atherosclerosis 20070401

• The -1131 T>C and S19W APOA5 gene polymorphisms are associated with high levels of triglycerides and apolipoprotein C-III, but not with coronary artery disease: an angiographic study.

  Atherosclerosis 20070401

• Prediction of genetic risk for metabolic syndrome.

  Atherosclerosis 20070401

• Connexin37 1019 gene polymorphism in myocardial infarction patients and centenarians.

  Atherosclerosis 20070401

• The enigmatic thymine DNA glycosylase.

  DNA repair 20070401

• Biological effects of the PINK1 c.1366C>T mutation: implications in Parkinson disease pathogenesis.

  Neurogenetics 20070401

• The mimivirus genome encodes a mitochondrial carrier that transports dATP and dTTP.

  Journal of virology 20070401

• Known components of the immunoglobulin A:T mutational machinery are intact in Burkitt lymphoma cell lines with G:C bias.

  Molecular immunology 20070401

• Thermodynamic properties of enzyme-catalyzed reactions involving cytosine, uracil, thymine, and their nucleosides and nucleotides.

  Biophysical chemistry 20070401

• DNMT3b 39179GT polymorphism and the risk of adenocarcinoma of the colon in Koreans.

  Biochemical genetics 20070401

• crinkled leaves 8--a mutation in the large subunit of ribonucleotide reductase--leads to defects in leaf development and chloroplast division in Arabidopsis thaliana.

  The Plant journal : for cell and molecular biology 20070401

• The human solute carrier family 11 member 1 protein (SLC11A1): linking infections, autoimmunity and cancer?

  FEMS immunology and medical microbiology 20070401

• Synthesis and evaluation of a (99m)Tc-MAMA-propyl-thymidine complex as a potential probe for in vivo visualization of tumor cell proliferation with SPECT.

  Nuclear medicine and biology 20070401

• Interleukin-1 alpha genotype and outcome of unrelated donor haematopoietic stem cell transplantation for chronic myeloid leukaemia.

  British journal of haematology 20070401

• Glycoprotein VI polymorphisms and outcome after percutaneous coronary interventions.

  Thrombosis and haemostasis 20070401

• Association of the 894G>T polymorphism of the endothelial constitutive nitric oxide synthase gene with unstable angina.

  Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologicas 20070401

• Understanding the evolutionary fate of finite populations: the dynamics of mutational effects.

  PLoS biology 20070401

• Evidence that in xeroderma pigmentosum variant cells, which lack DNA polymerase eta, DNA polymerase iota causes the very high frequency and unique spectrum of UV-induced mutations.

  Cancer research 20070401

• Photosensitized DNA damage induced by NADH: site specificity and mechanism.

  Free radical research 20070401

• Polymorphisms, mutations, and amplification of the EGFR gene in non-small cell lung cancers.

  PLoS medicine 20070401

• Genetic polymorphism of bile acid CoA: amino acid N-acyltransferase in Japanese individuals.

  Drug metabolism and pharmacokinetics 20070401

• Genetic variations of the ABC transporter gene ABCC3 in a Japanese population.

  Drug metabolism and pharmacokinetics 20070401

• Cycloheximide resistance in the Lipomycetaceae revisited.

  Canadian journal of microbiology 20070401

• Functional analysis of the polymorphism -211C>T in the regulatory region of the human ABCC3 gene.

  Life sciences 20070327

• Bis-cycloSal-d4T-monophosphates: drugs that deliver two molecules of bioactive nucleotides.

  Journal of medicinal chemistry 20070322

• Interaction of adenine adducts with thymine: a computational study.

  The journal of physical chemistry. B 20070322

• Microwave-promoted facile and efficient preparation of N-(alkoxycarbonylmethyl) nucleobases--building blocks for peptide nucleic acids.

  Molecules (Basel, Switzerland) 20070319

• Analysis of germline and tumor mutations of p53 gene in familial occurrence of soft tissue sarcomas.

  Journal of surgical oncology 20070315

• Identification of a novel D109Y mutation in Cu/Zn superoxide dismutase (sod1) gene associated with amyotrophic lateral sclerosis.

  Journal of the neurological sciences 20070315

• Expression and mutation analysis of the discoidin domain receptors 1 and 2 in non-small cell lung carcinoma.

  British journal of cancer 20070312

• Glutathione S-transferase polymorphisms and onset age in alpha-synuclein A53T mutant Parkinson's disease.

  American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics 20070305

• A promoter polymorphism (-839 C > T) at the dopamine transporter gene is associated with attention deficit/hyperactivity disorder in Brazilian children.

  American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics 20070305

• Recognition of thymine and related nucleosides by a Zn(II)-cyclen complex bearing a ferrocenyl pendant.

  Inorganic chemistry 20070305

• Model studies on a carprofen derivative as dual photosensitizer for thymine dimerization and (6-4) photoproduct repair.

  Chembiochem : a European journal of chemical biology 20070305

• Calorimetric unfolding of the bimolecular and i-motif complexes of the human telomere complementary strand, d(C(3)TA(2))(4).

  Biophysical chemistry 20070301

• Functional inference of the methylenetetrahydrofolate reductase 677C > T and 1298A > C polymorphisms from a large-scale epidemiological study.

  Human genetics 20070301

• Encapsulation of mono- and oligo-nucleotides into aqueous-core nanocapsules in presence of various water-soluble polymers.

  International journal of pharmaceutics 20070301

• Low-density lipoprotein receptor-related protein 1 polymorphism 663 C > T affects clotting factor VIII activity and increases the risk of venous thromboembolism.

  Journal of thrombosis and haemostasis : JTH 20070301

• Photoprotection by 1,25 dihydroxyvitamin D3 is associated with an increase in p53 and a decrease in nitric oxide products.

  The Journal of investigative dermatology 20070301

• Mass spectrometric characterization of 3'-imino[60]fulleryl-3'-deoxythymidine by collision-induced dissociation.

  Journal of mass spectrometry : JMS 20070301

• Cell-penetrating autoantibody induces caspase-mediated apoptosis through catalytic hydrolysis of DNA.

  Bioorganic & medicinal chemistry 20070301

• Cytostatic drug treatment causes seeding of gene promoter methylation.

  European journal of cancer (Oxford, England : 1990) 20070301

• Improved method to quantify intracellular zidovudine mono- and triphosphate in peripheral blood mononuclear cells by liquid chromatography-tandem mass spectrometry.

  Journal of mass spectrometry : JMS 20070301

• Common mode of DNA binding to cold shock domains. Crystal structure of hexathymidine bound to the domain-swapped form of a major cold shock protein from Bacillus caldolyticus.

  The FEBS journal 20070301

• HPLC-electrospray tandem mass spectrometry for rapid determination of dihydropyrimidine dehydrogenase activity.

  Clinical chemistry 20070301

• Repeated low-dose ultraviolet (UV) B exposures of humans induce limited photoprotection against the immune effects of erythemal UVB radiation.

  The British journal of dermatology 20070301

• Electrochemical detection of DNA hybridization by means of osmium tetroxide complexes and protective oligonucleotides.

  Analytical chemistry 20070301

• The -11377 C>G promoter variant of the adiponectin gene, prevalence of coronary atherosclerosis, and incidence of vascular events in men.

  Thrombosis and haemostasis 20070301

• Cloning and characterization of genes encoded in dTDP-D-mycaminose biosynthetic pathway from a midecamycin-producing strain, Streptomyces mycarofaciens.

  Acta biochimica et biophysica Sinica 20070301

• UV-induced mutagenesis in Escherichia coli SOS response: a quantitative model.

  PLoS computational biology 20070301

• Effect of intense pulsed-light exposure on lipid peroxides and thymine dimers in human skin in vivo.

  Archives of dermatology 20070301

• Clinical significance of p53, K-ras and DCC gene alterations in the stage I-II colorectal cancers.

  Journal of gastrointestinal and liver diseases : JGLD 20070301

• 'False' thymine-1H-Enol guanine base pair. low misinsertion rate by DNA polymerase explained by computational chemistry consideration.

  Biochemistry. Biokhimiia 20070301

• Anticipation and phenotypic heterogeneity in korean familial amyotrophic lateral sclerosis with superoxide dismutase 1 gene mutation.

  Journal of clinical neurology (Seoul, Korea) 20070301

• C/T conversion alters interleukin-1A promoter function in a human astrocyte cell line.

  Life sciences 20070227

• A human cancer-associated truncation of MBD4 causes dominant negative impairment of DNA repair in colon cancer cells.

  British journal of cancer 20070226

• Electrophilicity-based charge transfer descriptor.

  The journal of physical chemistry. A 20070222

• Factors determining the deriving force of DNA formation: geometrical differences of base pairs, dehydration of bases, and the arginine assisting.

  The journal of physical chemistry. B 20070222

• Substrate specificity of human thymine-DNA glycosylase on exocyclic cytosine adducts.

  Chemico-biological interactions 20070220

• Magnesium-cationic dummy atom molecules enhance representation of DNA polymerase beta in molecular dynamics simulations: improved accuracy in studies of structural features and mutational effects.

  Journal of molecular biology 20070216

• Synthesis of the 5-phosphono-pent-2-en-1-yl nucleosides: a new class of antiviral acyclic nucleoside phosphonates.

  Bioorganic & medicinal chemistry 20070215

• Simultaneous detection of purine and pyrimidine at highly boron-doped diamond electrodes by using liquid chromatography.

  Talanta 20070215

• Microhydration of cytosine and its radical anion: cytosine.(H2O)n (n=1-5).

  The Journal of chemical physics 20070214

• FRA1E common fragile site breaks map within a 370kilobase pair region and disrupt the dihydropyrimidine dehydrogenase gene (DPYD).

  Cancer letters 20070208

• Multiple proton-transfer reactions in DNA base pairs by coordination of pt complex.

  The journal of physical chemistry. B 20070208

• Synthesis and properties of nicked dumbbell and dumbbell DNA conjugates having stilbenedicarboxamide linkers.

  Organic & biomolecular chemistry 20070207

• A unique error signature for human DNA polymerase nu.

  DNA repair 20070204

• Towards elucidation of the mechanism of UV1C, a deoxyribozyme with photolyase activity.

  Journal of molecular biology 20070202

• Thymine dimerization in DNA is an ultrafast photoreaction.

  Science (New York, N.Y.) 20070202

• Biosynthesis of dTDP-6-deoxy-beta-D-allose, biochemical characterization of dTDP-4-keto-6-deoxyglucose reductase (GerKI) from Streptomyces sp. KCTC 0041BP.

  Glycobiology 20070201

• Orientation preferences of backbone secondary amide functional groups in peptide nucleic acid complexes: quantum chemical calculations reveal an intrinsic preference of cationic D-amino acid-based chiral PNA analogues for the P-form.

  Biophysical journal 20070201

• Pharmacological characterization of a novel nonpeptide antagonist of the human gonadotropin-releasing hormone receptor, NBI-42902.

  Endocrinology 20070201

• Antiproliferative activity of Pt(II) and Pd(II) phosphine complexes with thymine and thymidine.

  Journal of inorganic biochemistry 20070201

• Investigation of C-H...O=C and N-H...OC hydrogen-bonding interactions in crystalline thymine by DFT calculations of O-17, N-14 and H-2 NQR parameters.

  Biophysical chemistry 20070201

• The IL1A (-889) gene polymorphism is associated with chronic periodontal disease in a sample of Brazilian individuals.

  Journal of periodontal research 20070201

• CXCL10 haplotypes and multiple sclerosis: association and correlation with clinical course.

  European journal of neurology 20070201

• The crystal structure of the SV40 T-antigen origin binding domain in complex with DNA.

  PLoS biology 20070201

• Transcriptional regulation of the desferrioxamine gene cluster of Streptomyces coelicolor is mediated by binding of DmdR1 to an iron box in the promoter of the desA gene.

  The FEBS journal 20070201

• 'Multicolor' electrochemical labeling of DNA hybridization probes with osmium tetroxide complexes.

  Analytical chemistry 20070201

• Lack of association between the 807 C/T polymorphism of glycoprotein Ia gene and post-treatment platelet reactivity after aspirin and clopidogrel in patients with acute coronary syndrome.

  Thrombosis and haemostasis 20070201

• Transition-transversion bias is not universal: a counter example from grasshopper pseudogenes.

  PLoS genetics 20070201

• Splicing and the evolution of proteins in mammals.

  PLoS biology 20070201

• Bioassay-guided evolution of glycosylated macrolide antibiotics in Escherichia coli.

  PLoS biology 20070201

• Fatal spontaneous thrombosis of a cerebral arteriovenous malformation in a young patient with a rare heterozygous prothrombin gene mutation. Case report.

  Journal of neurosurgery 20070201

• Methylenetetrahydrofolate reductase 677C>T and methionine synthase 2756A>G mutations: no impact on survival, cognitive functioning, or cognitive decline in nonagenarians.

  The journals of gerontology. Series A, Biological sciences and medical sciences 20070201

• Synthesis of novel 2'-methyl carbovir analogues as potent antiviral agents.

  Archives of pharmacal research 20070201

• Assessment of DNA damage at the dimer level: measurement of the formamide lesion.

  Radiation research 20070201

• Using Hoechst 33342 to target radioactivity to the cell nucleus.

  Radiation research 20070201

• [XPS research on thymine implanted by low energy N+].

  Guang pu xue yu guang pu fen xi = Guang pu 20070201

• Does the A.T or G.C base-pair possess enhanced stability? Quantifying the effects of CH...O interactions and secondary interactions on base-pair stability using a phenomenological analysis and ab initio calculations.

  Journal of the American Chemical Society 20070131

• Investigation of proton transport tautomerism in clusters of protonated nucleic acid bases (cytosine, uracil, thymine, and adenine) and ammonia by high-pressure mass spectrometry and ab initio calculations.

  Journal of the American Chemical Society 20070124

• 3'-Azido-3'-deoxythymidine-(5')-tetraphospho-(5')-adenosine, the product of ATP-mediated excision of chain-terminating AZTMP, is a potent chain-terminating substrate for HIV-1 reverse transcriptase.

  Biochemistry 20070123

• [Nonsense mutation 193C>T of neurofibromatosis type 2--a neurosurgical challenge].

  Ideggyogyaszati szemle 20070120

• Janus-AT bases: synthesis, self-assembly, and solid state structures.

  The Journal of organic chemistry 20070119

• Effect of system variables involved in packed column supercritical fluid chromatography of stavudine taken as model analyte using response surface methodology along with study of thermodynamic parameters.

  Journal of pharmaceutical and biomedical analysis 20070117

• 15N-15N J-coupling across Hg(II): direct observation of Hg(II)-mediated T-T base pairs in a DNA duplex.

  Journal of the American Chemical Society 20070117

• Crystal structures, metal activation, and DNA-binding properties of two-domain IdeR from Mycobacterium tuberculosis.

  Biochemistry 20070116

• Self-repair of thymine dimer in duplex DNA.

  Journal of the American Chemical Society 20070110

• Gallic acid inhibits ribonucleotide reductase and cyclooxygenases in human HL-60 promyelocytic leukemia cells.

  Cancer letters 20070108

• RmlC, a C3' and C5' carbohydrate epimerase, appears to operate via an intermediate with an unusual twist boat conformation.

  Journal of molecular biology 20070105

• A novel mutation in the antithrombin gene (insT 7429-30) causes superior mesenteric vein thrombosis.

  Thrombosis research 20070101

• Localized and delocalized perfluorosemibullvalenes.

  Journal of molecular modeling 20070101

• Photochemical probing of the B--a conformational transition in a linearized pUC19 DNA and its polylinker region.

  Biophysical chemistry 20070101

• Hyperhomocysteinemia is a risk factor of recurrent coronary event in young patients irrespective to the MTHFR C677T polymorphism.

  Thrombosis research 20070101

• 'Pocket dendrimers' as nanoscale receptors for bimolecular guest accommodation.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20070101

• Identification of a novel mutation in the dihydropyrimidine dehydrogenase gene in a patient with a lethal outcome following 5-fluorouracil administration and the determination of its frequency in a population of 500 patients with colorectal carcinoma.

  Clinical biochemistry 20070101

• Polymorphic variation in the 11beta-hydroxylase gene associates with reduced 11-hydroxylase efficiency.

  Hypertension (Dallas, Tex. : 1979) 20070101

• Changes of initiation mass and cell dimensions by the 'eclipse'.

  Molecular microbiology 20070101

• Association of the C-344T aldosterone synthase gene variant with essential hypertension: a meta-analysis.

  Journal of hypertension 20070101

• The identification of a novel alternatively spliced form of the MBD4 DNA glycosylase.

  Oncology reports 20070101

• Structural insight into the substrate specificity of DNA Polymerase mu.

  Nature structural & molecular biology 20070101

• Exploration of triple-helical fragments: crystallization and preliminary X-ray diffraction of d(TGGCCTTAAGG).

  Acta crystallographica. Section F, Structural biology and crystallization communications 20070101

• Polymeric nanogel formulations of nucleoside analogs.

  Expert opinion on drug delivery 20070101

• Vascular alpha1-adrenoceptors in isolated perfused rat kidney: influence of ageing.

  Autonomic & autacoid pharmacology 20070101

• Enriching the environment of alphaCaMKIIT286A mutant mice reveals that LTD occurs in memory processing but must be subsequently reversed by LTP.

  Learning & memory (Cold Spring Harbor, N.Y.) 20070101

• Chicken ovalbumin upstream promoter transcription factor II regulates uncoupling protein 3 gene transcription in Phodopus sungorus.

  BMC molecular biology 20070101

• Association of star-shaped poly(D,L-lactide)s containing nucleobase multiple hydrogen bonding.

  Biomacromolecules 20070101

• Growth of the protozoan parasite Entamoeba histolytica in 5-azacytidine has limited effects on parasite gene expression.

  BMC genomics 20070101

• Energetics of the protein-DNA-water interaction.

  BMC structural biology 20070101

• Endogenous phospholipid metabolite containing topical product inhibits ultraviolet light-induced inflammation and DNA damage in human skin.

  Skin pharmacology and physiology 20070101

• FRA-1 protein overexpression is a feature of hyperplastic and neoplastic breast disorders.

  BMC cancer 20070101

• Intron Evolution and Information processing in the DNA polymerase alpha gene in spirotrichous ciliates: a hypothesis for interconversion between DNA and RNA deletion.

  Biology direct 20070101

• FOXL2 mutations in Chinese patients with blepharophimosis-ptosis-epicanthus inversus syndrome.

  Molecular vision 20070101

• Noise in timing and precision of gene activities in a genetic cascade.

  Molecular systems biology 20070101

• The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing.

  PloS one 20070101

• Kinetic recognition of AT-rich DNA by ruthenium complexes.

  Angewandte Chemie (International ed. in English) 20070101

• Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.

  Genome biology 20070101

• Molecular study of (TG)m(T)n polymorphisms in Iranian males with congenital bilateral absence of the vas deferens.

  Journal of andrology 20070101

• The effect of MDR1 G2677T/A polymorphism on pharmacokinetics of gabapentin in healthy Korean subjects.

  Archives of pharmacal research 20070101

• Molecule-responsive block copolymer micelles.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20070101

• Developmental stage related patterns of codon usage and genomic GC content: searching for evolutionary fingerprints with models of stem cell differentiation.

  Genome biology 20070101

• Dielectric dispersion of short single-stranded DNA in aqueous solutions with and without added salt.

  Physical review. E, Statistical, nonlinear, and soft matter physics 20070101

• Self-assembly of bidentate ligands for combinatorial homogeneous catalysis: methanol-stable platforms analogous to the adenine-thymine base pair.

  Angewandte Chemie (International ed. in English) 20070101

• Heteropolymeric triplex-based genomic assay to detect pathogens or single-nucleotide polymorphisms in human genomic samples.

  PloS one 20070101

• Folic acid fortification and public health: report on threshold doses above which unmetabolised folic acid appear in serum.

  BMC public health 20070101

• The expression of mismatched repair genes and their correlation with clinicopathological parameters and response to neo-adjuvant chemotherapy in breast cancer.

  International seminars in surgical oncology : ISSO 20070101

• Structure, substrate recognition and reactivity of Leishmania major mevalonate kinase.

  BMC structural biology 20070101

• Mutagenesis in Arabidopsis.

  Methods in molecular biology (Clifton, N.J.) 20070101

• Solid-phase synthesis of a thymidinyl dipeptide urea library.

  Journal of combinatorial chemistry 20070101

• The c.-292C>T promoter polymorphism increases reticulocyte-type 15-lipoxygenase-1 activity and could be atheroprotective.

  Clinical chemistry and laboratory medicine 20070101

• Racemic synthesis and antiviral evaluation of 4'(alpha)-hydroxymethyl and 6'(alpha)-methyl substituted apiosyl nucleosides.

  Nucleosides, nucleotides & nucleic acids 20070101

• Conversion of amino-acid sequence in proteins to classical music: search for auditory patterns.

  Genome biology 20070101

• A case-control study of apoA5 -1131T-->C polymorphism that examines the role of triglyceride levels in diabetic nephropathy.

  Journal of diabetes and its complications 20070101

• The promoter and transcribed regions of the Leishmania tarentolae spliced leader RNA gene array are devoid of nucleosomes.

  BMC microbiology 20070101

• Regulation of expression and kinetic modeling of substrate interactions of a uracil transporter in Aspergillus nidulans.

  Molecular membrane biology 20070101

• Central administration of dipeptides, beta-alanyl-BCAAs, induces hyperactivity in chicks.

  BMC neuroscience 20070101

• Mechanism of action of (-)-(2R,4R)-1-(2-hydroxymethyl-1,3-dioxolan-4-yl) thymine as an anti-HIV agent.

  Antiviral chemistry & chemotherapy 20070101

• Evolutionary implications of inversions that have caused intra-strand parity in DNA.

  BMC genomics 20070101

• Evaluation of AC(n) and C(-106)T polymorphisms of the aldose reductase gene in Brazilian patients with DM1 and susceptibility to diabetic retinopathy.

  Molecular vision 20070101

• Blueprint for a high-performance biomaterial: full-length spider dragline silk genes.

  PloS one 20070101

• Primary omental gastrointestinal stromal tumor (GIST).

  World journal of surgical oncology 20070101

• Do photolyases need to provide considerable activation energy for the splitting of cyclobutane pyrimidine dimer radical anions?

  Chemistry (Weinheim an der Bergstrasse, Germany) 20070101

• [Quantitative microarray-based DNA methylation analysis of E-cadherin gene promoter in acute leukemia].

  Zhonghua zhong liu za zhi [Chinese journal of oncology] 20070101

• Solvent effects on the steady-state absorption and fluorescence spectra of uracil, thymine and 5-fluorouracil.

  Photochemistry and photobiology 20070101

• Sequence, structure and energy transfer in DNA.

  Photochemistry and photobiology 20070101

• Silencing and un-silencing of tetracycline-controlled genes in neurons.

  PloS one 20070101

• An artificial base pair, mediated by hydrogen bonding and metal-ion binding.

  Angewandte Chemie (International ed. in English) 20070101

• Correcting for sequence biases in present/absent calls.

  Genome biology 20070101

• [Individual characteristics of human adaptation to intermittent hypoxia: possible role of genetic mechanisms].

  Fiziolohichnyi zhurnal (Kiev, Ukraine : 1994) 20070101

• Analysis of the features and source gene composition of the AluYg6 subfamily of human retrotransposons.

  BMC evolutionary biology 20070101

• Modeling Neisseria meningitidis metabolism: from genome to metabolic fluxes.

  Genome biology 20070101

• Characterization of thimet oligopeptidase and neurolysin activities in B16F10-Nex2 tumor cells and their involvement in angiogenesis and tumor growth.

  Molecular cancer 20070101

• A structural split in the human genome.

  PloS one 20070101

• DNA methylation profiling of ovarian carcinomas and their in vitro models identifies HOXA9, HOXB5, SCGB3A1, and CRABP1 as novel targets.

  Molecular cancer 20070101

• Hyperhomocysteinemia in women with unexplained sterility or recurrent early pregnancy loss from Southern Italy: a preliminary report.

  Thrombosis journal 20070101

• Primate TNF promoters reveal markers of phylogeny and evolution of innate immunity.

  PloS one 20070101

• Optimization of DNA extraction from a scleractinian coral for the detection of thymine dimers by immunoassay.

  Photochemistry and photobiology 20070101

• High prevalence of mutations in peripherin/RDS in autosomal dominant macular dystrophies in a Spanish population.

  Molecular vision 20070101

• Comparative mitochondrial genomics of snakes: extraordinary substitution rate dynamics and functionality of the duplicate control region.

  BMC evolutionary biology 20070101

• Comparison of the TaqMan and LightCycler systems in evaluation of CYP2B6 516G>T polymorphism.

  Molecular and cellular probes 20070101

• Subarachnoid hemorrhage: tests of association with apolipoprotein E and elastin genes.

  BMC medical genetics 20070101

• Violating the splicing rules: TG dinucleotides function as alternative 3' splice sites in U2-dependent introns.

  Genome biology 20070101

• RASTA-Bacteria: a web-based tool for identifying toxin-antitoxin loci in prokaryotes.

  Genome biology 20070101

• Effects of folate cycle disruption by the green tea polyphenol epigallocatechin-3-gallate.

  The international journal of biochemistry & cell biology 20070101

• [Chemical cleavage of DNA with single base mismatches for detection of mutations of unknown localization].

  Molekuliarnaia biologiia 20070101

• Ring opening of the cyclobutane in a thymine dimer radical anion.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20070101

• Detection of knockdown resistance (kdr) mutations in Anopheles gambiae: a comparison of two new high-throughput assays with existing methods.

  Malaria journal 20070101

• Identification of human pathogens isolated from blood using microarray hybridisation and signal pattern recognition.

  BMC microbiology 20070101

• A newly detected mutation of the RET protooncogene in exon 8 as a cause of multiple endocrine neoplasia type 2A.

  Hormones (Athens, Greece) 20070101

• Genome dynamics of short oligonucleotides: the example of bacterial DNA uptake enhancing sequences.

  PloS one 20070101

• Effect of active smoking on the human bronchial epithelium transcriptome.

  BMC genomics 20070101

• Formamide as the main building block in the origin of nucleic acids.

  BMC evolutionary biology 20070101

• Association of CTLA-4 gene polymorphisms with sporadic breast cancer in Chinese Han population.

  BMC cancer 20070101

• Paradoxical DNA repair and peroxide resistance gene conservation in Bacillus pumilus SAFR-032.

  PloS one 20070101

• Alternate PNA-DNA chimeras (PNA-DNA)(n): synthesis, binding properties and biological activity.

  Biopolymers 20070101

• Trinucleotide cassettes increase diversity of T7 phage-displayed peptide library.

  BMC biotechnology 20070101

• Intracellular nucleoside triphosphate concentrations in HIV-infected patients on dual nucleoside reverse transcriptase inhibitor therapy.

  Antiviral therapy 20070101

• The use of multiple displacement amplified DNA as a control for methylation specific PCR, pyrosequencing, bisulfite sequencing and methylation-sensitive restriction enzyme PCR.

  BMC molecular biology 20070101

• Local Renyi entropic profiles of DNA sequences.

  BMC bioinformatics 20070101

• The 5, 10 methylenetetrahydrofolate reductase C677T mutation and risk of fetal loss: a case series and review of the literature.

  Thrombosis journal 20070101

• In situ detection of non-polyadenylated RNA molecules using Turtle Probes and target primed rolling circle PRINS.

  BMC biotechnology 20070101

• Assisted Reproductive Technology affects developmental kinetics, H19 Imprinting Control Region methylation and H19 gene expression in individual mouse embryos.

  BMC developmental biology 20070101

• The complete mitochondrial genome of Pseudocellus pearsei (Chelicerata: Ricinulei) and a comparison of mitochondrial gene rearrangements in Arachnida.

  BMC genomics 20070101

• N-1 regioselective Michael-type addition of 5-substituted uracils to (2-hydroxyethyl) acrylate.

  Beilstein journal of organic chemistry 20070101

• Photochemistry of 5-fluorouracil dideoxyribonucleoside monophosphate.

  Photochemistry and photobiology 20070101

• The base-pairing ability of the base pair-mimic nucleosides.

  Nucleic acids symposium series (2004) 20070101

• Structural and physicochemical features on the metal-mediated base pairs.

  Nucleic acids symposium series (2004) 20070101

• Gene regulation by decoy approach (II): Development of photo-cross-linked oligonucleotides duplex as a decoy DNA for estrogen receptor.

  Nucleic acids symposium series (2004) 20070101

• The specific interaction between two T:T mismatch base pairs and mercury (II) cation.

  Nucleic acids symposium series (2004) 20070101

• Synthesis of an enantiomeric DNA oligomer and its T-HgII-T base-pair formation.

  Nucleic acids symposium series (2004) 20070101

• Photochemical transition of 5-methylcytosine to thymine by DNA photoligation.

  Nucleic acids symposium series (2004) 20070101

• Conformational switch of a functional nanowire based on the DNA G-quadruplex.

  Nucleic acids symposium series (2004) 20070101

• Electrochemical and fluorescence detection of cytosine-related SNPs using a ferrocenyl naphthyridine derivative.

  Nucleic acids symposium series (2004) 20070101

• Electrochemical properties of anthraquinone-capped DNA-hairpins immobilized on gold surface.

  Nucleic acids symposium series (2004) 20070101

• Nanopore current transduction analysis of protein binding to non-terminal and terminal DNA regions: analysis of transcription factor binding, retroviral DNA terminus dynamics, and retroviral integrase-DNA binding.

  BMC bioinformatics 20070101

• Nanopore-based kinetics analysis of individual antibody-channel and antibody-antigen interactions.

  BMC bioinformatics 20070101

• The alpha-hemolysin nanopore transduction detector - single-molecule binding studies and immunological screening of antibodies and aptamers.

  BMC bioinformatics 20070101

• Synthesis and properties of oligonucleotides containing a 7-membered (oxepane) sugar ring.

  Nucleosides, nucleotides & nucleic acids 20070101

• Synthesis of L-2'-deoxypentofuranonucleoside derivatives of thymine from D-glucose.

  Nucleosides, nucleotides & nucleic acids 20070101

• New developments of the 'lock-in' modified cycloSal-d4TMPs.

  Nucleosides, nucleotides & nucleic acids 20070101

• Novel selective biocatalytic deacylation studies on key precursors for bicyclonucleosides.

  Nucleosides, nucleotides & nucleic acids 20070101

• Mismatch base pair detection by fluorescence spectral change upon addition of metal cation--toward efficient analysis of single nucleotide polymorphism.

  Nucleosides, nucleotides & nucleic acids 20070101

• Synthetic use of epoxy-sugar nucleosides.

  Nucleosides, nucleotides & nucleic acids 20070101

• Synthesis of the bicyclo-[4.3.0]-thymidyl-nucleoside via pd(II)-mediated ring expansion chemistry.

  Nucleosides, nucleotides & nucleic acids 20070101

• Intracellular trapping of cycloSal-pronucleotides by enzymatic cleavage.

  Nucleosides, nucleotides & nucleic acids 20070101

• An alternative synthetic method for 4'-C-ethynylstavudine by means of nucleophilic substitution of 4'-benzoyloxythymine nucleoside.

  Nucleosides, nucleotides & nucleic acids 20070101

• 5-diacetoxymethyl-cycloSal-d4TMP - A prototype of enzymatically activated cycloSal-pronucleotides.

  Nucleosides, nucleotides & nucleic acids 20070101

• Mosquito transcriptome changes and filarial worm resistance in Armigeres subalbatus.

  BMC genomics 20070101

• Effective selection of informative SNPs and classification on the HapMap genotype data.

  BMC bioinformatics 20070101

• Breast tumour angiogenesis.

  Breast cancer research : BCR 20070101

• Interactions of nucleobases with alkali earth metal cations--electrospray ionization mass spectrometric study.

  European journal of mass spectrometry (Chichester, England) 20070101

• Complexes of Pd(II) and Pt(II) with 9-aminoacridine: reactions with DNA and study of their antiproliferative activity.

  Bioinorganic chemistry and applications 20070101

• Novel fibrillin 1 mutation in a case of neonatal Marfan syndrome: the increasing importance of early recognition.

  Congenital heart disease 20070101

• Base excision repair and the role of MUTYH.

  Hereditary cancer in clinical practice 20070101

• Strategies for controlled placement of nanoscale building blocks.

  Nanoscale research letters 20070101

• Targeting human immunodeficiency virus type 1 assembly, maturation and budding.

  Drug target insights 20070101

• Coagulation disorders seen through the window of molecular biology.

  Indian journal of human genetics 20070101

• Insights on resistance to reverse transcriptase: the different patterns of interaction of the nucleoside reverse transcriptase inhibitors in the deoxyribonucleotide triphosphate binding site relative to the normal substrate.

  Journal of medicinal chemistry 20061228

• N1-substituted thymine derivatives as mitochondrial thymidine kinase (TK-2) inhibitors.

  Journal of medicinal chemistry 20061228

• Synthesis and anti-human immunodeficiency virus activity of 4'-branched (+/-)-4'-thiostavudines.

  Journal of medicinal chemistry 20061228

• Unified model for the ultrafast decay of pyrimidine nucleobases.

  The journal of physical chemistry. B 20061228

• Allosteric and orthosteric binding modes of two nonpeptide human gonadotropin-releasing hormone receptor antagonists.

  Biochemistry 20061226

• An association between BPDE-like DNA adduct levels and P53 gene mutation in pterygium.

  Molecular vision 20061224

• Bacteriostatic polymer film immobilization.

  Journal of biomedical materials research. Part A 20061215

• Electronic structure of DNA nucleobases and their dinucleotides explored by soft X-ray spectroscopy.

  The journal of physical chemistry. A 20061214

• Conical intersections in thymine.

  The journal of physical chemistry. A 20061214

• Watson-Crick pairing of nucleobases functionalized with open-shell molecular entities in crystalline solids.

  Chemical communications (Cambridge, England) 20061214

• Surface-enhanced Raman spectroscopy (SERS) for sub-micromolar detection of DNA/RNA mononucleotides.

  Journal of the American Chemical Society 20061213

• Retraction notice to 'The yeast RAD2, but not RAD1, gene is involved in the transcription-coupled repair of thymine glycols' [Mutat. Res. 337 (1995) 169-178].

  DNA repair 20061209

• On the unusual stability of valence anions of thymine based on very rare tautomers: A computational study.

  The journal of physical chemistry. B 20061207

• Polymorphisms in the interleukin-4 and IL-4 receptor genes modify risk for chronic inflammatory arthropathies in women.

  Experimental and molecular pathology 20061201

• Novel ferrochelatase mutations in Japanese patients with erythropoietic protoporphyria: high frequency of the splice site modulator IVS3-48C polymorphism in the Japanese population.

  The Journal of investigative dermatology 20061201

• NMR assessment of the global shape of a non-labelled DNA dodecamer containing a tandem of G-T mismatches.

  Magnetic resonance in chemistry : MRC 20061201

• A purine at +2 rather than +1 adjacent to the human U6 promoter is required to prepare effective short hairpin RNAs.

  Biochemical and biophysical research communications 20061201

• A model for targeted substitution mutagenesis during SOS replication of double-stranded DNA containing cis-syn cyclobutane thymine dimers.

  Environmental and molecular mutagenesis 20061201

• Hybrid polymer nanocapsules enhance in vitro delivery of azidothymidine-triphosphate to macrophages.

  Journal of controlled release : official journal of the Controlled Release Society 20061201

• Investigation of the functional variant c.-169T > C of the Fc receptor-like 3 (FCRL3) gene in alopecia areata.

  International journal of immunogenetics 20061201

• Methylenetetrahydrofolate reductase C677T-polymorphism and its association with alcohol withdrawal seizure.

  Alcoholism, clinical and experimental research 20061201

• Alterations of the USP26 gene in Caucasian men.

  International journal of andrology 20061201

• A novel missense mutation in Van der Woude syndrome: usefulness of fingernail DNA for genetic analysis.

  Journal of dental research 20061201

• NFAT5 regulates HIV-1 in primary monocytes via a highly conserved long terminal repeat site.

  PLoS pathogens 20061201

• Elevation of cellular BPDE uptake by human cells: a possible factor contributing to co-carcinogenicity by arsenite.

  Environmental health perspectives 20061201

• Mechanism of 3-deazaguanine transport in the rat heart.

  Acta physiologica Hungarica 20061201

• Genotyping of Chlamydophila psittaci in human samples.

  Emerging infectious diseases 20061201

• RNA polymerase II bypass of oxidative DNA damage is regulated by transcription elongation factors.

  The EMBO journal 20061129

• Efficient N-arylation and N-alkenylation of the five DNA/RNA nucleobases.

  The Journal of organic chemistry 20061124

• The nature of the adsorption of nucleobases on the gold [111] surface.

  The journal of physical chemistry. B 20061123

• The role of nucleobase carboradical and carbanion on DNA lesions: a theoretical study.

  The journal of physical chemistry. B 20061123

• Base pair recognition of the stereochemically alpha-substituted gamma-turn of pyrrole/imidazole hairpin polyamides.

  Journal of the American Chemical Society 20061122

• Design, synthesis and antibacterial activity of novel 1,3-thiazolidine pyrimidine nucleoside analogues.

  Bioorganic & medicinal chemistry 20061115

• Meta-analyses of observational and genetic association studies of folate intakes or levels and breast cancer risk.

  Journal of the National Cancer Institute 20061115

• Polymorphism in the IL-1alpha (-889) locus associated with elevated risk of primary open angle glaucoma.

  Molecular vision 20061115

• Tuning the gas phase redox properties of copper(II) ternary complexes of terpyridines to control the formation of nucleobase radical cations.

  Dalton transactions (Cambridge, England : 2003) 20061114

• Ion-induced biomolecular radiation damage: from isolated nucleobases to nucleobase clusters.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20061113

• Local aromaticity in natural nucleobases and their size-expanded benzo-fused derivatives.

  The journal of physical chemistry. A 20061109

• Multiple solutions to inefficient lesion bypass by T7 DNA polymerase.

  DNA repair 20061108

• Radiation-induced formation of DNA intrastrand crosslinks between thymine and adenine bases: A theoretical approach.

  Organic & biomolecular chemistry 20061107

• Enantioseparation of cis and trans nucleosides, aromatic analogues of stavudine, by capillary electrophoresis and high-performance liquid chromatography.

  Journal of chromatography. A 20061103

• Mutations in DNA polymerase eta are not detected in squamous cell carcinoma of the skin.

  International journal of cancer 20061101

• Monorhamnolipids and 3-(3-hydroxyalkanoyloxy)alkanoic acids (HAAs) production using Escherichia coli as a heterologous host.

  Applied microbiology and biotechnology 20061101

• Presynaptic inhibition by kainate receptors converges mechanistically with presynaptic inhibition by adenosine and GABAB receptors.

  Neuropharmacology 20061101

• Efficient cycloreversion of cis,syn-thymine photodimer by a Zn2+ -1,4,7,10-tetraazacyclododecane complex bearing a lumiflavin and tryptophan by chemical reduction and photoreduction of a lumiflavin unit.

  Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 20061101

• Real-time quantitative PCR assays for quantification of L1781 ACCase inhibitor resistance allele in leaf and seed pools of Lolium populations.

  Pest management science 20061101

• CARD15 gene variants in aggressive periodontitis.

  Journal of clinical periodontology 20061101

• Relationship between IL-1A polymorphisms and gingival overgrowth in renal transplant recipients receiving Cyclosporin A.

  Journal of clinical periodontology 20061101

• In vitro nonenzymatic glycation of DNA nucleobases: an evaluation of advanced glycation end products under alkaline pH.

  Analytical and bioanalytical chemistry 20061101

• The mismatch repair gene hPMS2 is mutated in primary breast cancer.

  International journal of molecular medicine 20061101

• Association of interleukin-1beta polymorphism with recurrent aphthous stomatitis in Brazilian individuals.

  Oral diseases 20061101

• Influence of the CD14 C260T promoter polymorphism on C-reactive protein levels in patients with coronary artery disease.

  The American journal of cardiology 20061101

• Functional polymorphisms in the matrix metalloproteinase-9 gene in relation to severity of chronic periodontitis.

  Journal of periodontology 20061101

• Inference of splicing regulatory activities by sequence neighborhood analysis.

  PLoS genetics 20061101

• Structure and cytotoxicity of a new lanostane-type triterpene glycoside from the sea cucumber Holothuria hilla.

  Chemistry & biodiversity 20061101

• Electronic coupling mediated by stacked [Thymine-Hg-Thymine] base pairs.

  The journal of physical chemistry. B 20061026

• Mutations in the gene encoding the alpha-subunit of rod phosphodiesterase in consanguineous Pakistani families.

  Molecular vision 20061026

• Guanine-thymine intrastrand cross-linked lesion containing oligonucleotides: from chemical synthesis to in vitro enzymatic replication.

  Organic & biomolecular chemistry 20061021

• Proton transfers induced by lead(II) in a uracil nucleobase: a study based on quantum chemistry calculations.

  The journal of physical chemistry. A 20061019

• Structural basis for non-competitive product inhibition in human thymidine phosphorylase: implications for drug design.

  The Biochemical journal 20061015

• Total plasma homocysteine and methylenetetrahydrofolate reductase C677T polymorphism in patients with colorectal carcinoma.

  World journal of gastroenterology 20061014

• Effects of microsolvation on uracil and its radical anion: uracil(H2O)n (n = 1-5).

  The Journal of chemical physics 20061014

• The catalytic power of uracil DNA glycosylase in the opening of thymine base pairs.

  Journal of the American Chemical Society 20061011

• Molecular-level helical stack of a nucleotide-appended oligo(p-phenylenevinylene) directed by supramolecular self-assembly with a complementary oligonucleotide as a template.

  Journal of the American Chemical Society 20061011

• Supramolecular nanopatterns self-assembled by adenine-thymine quartets at the liquid/solid interface.

  Journal of the American Chemical Society 20061011

• Synthesis of a C-linked glycosylated thymine-based PNA monomer and its incorporation into a PNA oligomer.

  Organic & biomolecular chemistry 20061007

• Selective product amplification of thymine photodimer by recognition-directed supramolecular assistance.

  Organic & biomolecular chemistry 20061007

• Understanding electron attachment to the DNA double helix: the thymidine monophosphate-adenine pair in the gas phase and aqueous solution.

  The journal of physical chemistry. B 20061005

• Catalytic mechanism of Escherichia coli endonuclease VIII: roles of the intercalation loop and the zinc finger.

  Biochemistry 20061003

• Trypanosoma brucei: a survey of pyrimidine transport activities.

  Experimental parasitology 20061001

• Functional analysis of two prothrombin 3'-untranslated region variants: the C20209T variant, mainly found among African-Americans, and the C20209A variant.

  Journal of thrombosis and haemostasis : JTH 20061001

• Exercise intolerance associated with a novel 8300T > C mutation in mitochondrial transfer RNAlys.

  Muscle & nerve 20061001

• Suppression of serum luteinizing hormone in postmenopausal women by an orally administered nonpeptide antagonist of the gonadotropin-releasing hormone receptor (NBI-42902).

  The Journal of clinical endocrinology and metabolism 20061001

• Alpha(1A/L)-adrenoceptors mediate contraction of the circular smooth muscle of the pig urethra.

  Autonomic & autacoid pharmacology 20061001

• Selective agonists reveal alpha(1A)- and alpha(1B)-adrenoceptor subtypes in caudal artery of the young rat.

  Autonomic & autacoid pharmacology 20061001

• A differential association of interferon-gamma high-producing allele T and low-producing allele A (+874 A/T) with Hashimoto's thyroiditis and Graves' disease.

  Scandinavian journal of immunology 20061001

• [The MYH9 syndrome: report of a new case with a new mutation of the MYH9 gene].

  La Revue de medecine interne 20061001

• Analysis of the C/T(-1) single nucleotide polymorphism in the CD40 gene in multiple sclerosis.

  Tissue antigens 20061001

• Heterogeneous genomic molecular clocks in primates.

  PLoS genetics 20061001

• Forces shaping the fastest evolving regions in the human genome.

  PLoS genetics 20061001

• A case of infantile Alexander disease accompanied by infantile spasms diagnosed by DNA analysis.

  Journal of Korean medical science 20061001

• Bacterial programmed cell death and multicellular behavior in bacteria.

  PLoS genetics 20061001

• Binding of oxovanadium ions to the major and minor grooves of DNA duplex: stability and structural models.

  Biochemistry and cell biology = Biochimie et biologie cellulaire 20061001

• A kinetic, modeling and mechanistic re-analysis of thymidine phosphorylase and some related enzymes.

  Journal of enzyme inhibition and medicinal chemistry 20061001

• Inhibition of endogenous reverse transcription of human and nonhuman primate lentiviruses: potential for development of lentivirucides.

  Virology 20060930

• An essential GT motif in the lamin A promoter mediates activation by CREB-binding protein.

  Biochemical and biophysical research communications 20060929

• Kinetics of nonpeptide antagonist binding to the human gonadotropin-releasing hormone receptor: Implications for structure-activity relationships and insurmountable antagonism.

  Biochemical pharmacology 20060928

• Specificity of human thymine DNA glycosylase depends on N-glycosidic bond stability.

  Journal of the American Chemical Society 20060927

• Selective excision of chain-terminating nucleotides by HIV-1 reverse transcriptase with phosphonoformate as substrate.

  The Journal of biological chemistry 20060922

• Structures of nucleobases trapped within Au triangles and its effects on hydrogen bonding in base pairs of DNA.

  The journal of physical chemistry. B 20060921

• The difluorotoluene debate--a decade later.

  Chemical communications (Cambridge, England) 20060921

• The T(-786)C endothelial nitric oxide synthase genotype predicts cardiovascular mortality in high-risk patients.

  Journal of the American College of Cardiology 20060919

• Ferrocenylnaphthalene diimide-based electrochemical detection of methylated gene.

  Analytica chimica acta 20060918

• Synthesis of cell-permeable peptide nucleic acids and characterization of their hybridization and uptake properties.

  Bioorganic & medicinal chemistry letters 20060915

• Dinucleotide spore photoproduct, a minimal substrate of the DNA repair spore photoproduct lyase enzyme from Bacillus subtilis.

  The Journal of biological chemistry 20060915

• Interaction energy contributions of H-bonded and stacked structures of the AT and GC DNA base pairs from the combined density functional theory and intermolecular perturbation theory approach.

  Journal of the American Chemical Society 20060913

• Nanoswitches based on DNA base pairs: why adenine-thymine is less suitable than guanine-cytosine.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20060911

• Characterization of an active spore photoproduct lyase, a DNA repair enzyme in the radical S-adenosylmethionine superfamily.

  The Journal of biological chemistry 20060908

• Application of the cycloSal-prodrug approach for improving the biological potential of phosphorylated biomolecules.

  Antiviral research 20060901

• Identification of coding single nucleotide polymorphisms and mutations by combination of genome tiling arrays and enrichment/depletion of mismatch cDNAs.

  Analytical biochemistry 20060901

• Protective effect of the isoflavone equol against DNA damage induced by ultraviolet radiation to hairless mouse skin.

  Journal of veterinary science 20060901

• A phase-variable mechanism controlling the Campylobacter jejuni FlgR response regulator influences commensalism.

  Molecular microbiology 20060901

• Identification of radiation-induced cross-linking between thymine and tryptophan by electrospray ionization-mass spectrometry.

  Journal of mass spectrometry : JMS 20060901

• Medullary carcinoma of breast with a novel germline mutation 1123T >G in exon 11 of BRCA1.

  Journal of the College of Physicians and Surgeons--Pakistan : JCPSP 20060901

• Exploiting the reversibility of natural product glycosyltransferase-catalyzed reactions.

  Science (New York, N.Y.) 20060901

• Non-nucleoside HIV-1 reverse transcriptase inhibitors, Part 7. Synthesis, antiviral activity, and 3D-QSAR investigations of novel 6-(1-naphthoyl) HEPT analogues.

  Chemical & pharmaceutical bulletin 20060901

• Effects of folic acid deficiency and MTHFR C677T polymorphism on spontaneous and radiation-induced micronuclei in human lymphocytes.

  Mutagenesis 20060901

• Michael addition of pyrimidine with disaccharide acrylates catalyzed in organic medium with lipase M from Mucor javanicus.

  Biotechnology letters 20060901

• Transcription arrest at an abasic site in the transcribed strand of template DNA.

  Chemical research in toxicology 20060901

• Identification of a novel mutation in the spastin gene (SPG4) in an Italian family with hereditary spastic paresis.

  Panminerva medica 20060901

• Negative correlation of G+C content at silent substitution sites between orthologous human and mouse protein-coding sequences.

  DNA research : an international journal for rapid publication of reports on genes and genomes 20060831

• Ab initio determination of the ionization potentials of DNA and RNA nucleobases.

  The Journal of chemical physics 20060828

• High resolution dissociative electron attachment to gas phase adenine.

  The Journal of chemical physics 20060828

• A novel mutation of PAX3 in a Chinese family with Waardenburg syndrome.

  Molecular vision 20060828

• Topology of charge density of flucytosine and related molecules and characteristics of their bond charge distributions.

  The journal of physical chemistry. A 20060824

• Photoinduced reductive repair of thymine glycol: implications for excess electron transfer through DNA containing modified bases.

  Journal of the American Chemical Society 20060823

• Human DNA polymerase N (POLN) is a low fidelity enzyme capable of error-free bypass of 5S-thymine glycol.

  The Journal of biological chemistry 20060818

• H-bonding-directed self-assembly of synthetic copolymers containing nucleobases: organization and colloidal fusion in a noncompetitive solvent.

  Langmuir : the ACS journal of surfaces and colloids 20060815

• Postoperative pain, morphine consumption, and genetic polymorphism of IL-1beta and IL-1 receptor antagonist.

  Neuroscience letters 20060814

• A distinct TthMutY bifunctional glycosylase that hydrolyzes not only adenine but also thymine opposite 8-oxoguanine in the hyperthermophilic bacterium, Thermus thermophilus.

  DNA repair 20060813

• Mitochondrial DNA depletion and thymidine phosphate pool dynamics in a cellular model of mitochondrial neurogastrointestinal encephalomyopathy.

  The Journal of biological chemistry 20060811

• Thymine oxetanes as charge traps for chemical monitoring of nucleic acid mediated transfer of excess electrons.

  Angewandte Chemie (International ed. in English) 20060811

• Molecular genetics of retinitis pigmentosa in two Romani (Gypsy) families.

  Molecular vision 20060811

• Comprehensive study of the effects of methylation on tautomeric equilibria of nucleic acid bases.

  The journal of physical chemistry. B 20060810

• Role of sequence and conformation on the photochemistry and the photophysics of A-T DNA dimers: an experimental and computational approach.

  The journal of physical chemistry. B 20060810

• Effect of ethylene glycol, urea, and N-methylated glycines on DNA thermal stability: the role of DNA base pair composition and hydration.

  Biochemistry 20060808

• Palladium(II) and platinum(II) organometallic complexes with the model nucleobase anions of thymine, uracil, and cytosine: antitumor activity and interactions with DNA of the platinum compounds.

  Inorganic chemistry 20060807

• Total dissociative electron attachment cross sections for molecular constituents of DNA.

  The Journal of chemical physics 20060807

• Reaction force analysis of the effect of Mg(II) on the 1,3 intramolecular hydrogen transfer in thymine.

  The journal of physical chemistry. A 20060803

• Maternal IVS1-401 T allele of the estrogen receptor alpha is an independent predictor of late fetal loss.

  Fertility and sterility 20060801

• [Nle4-D-Phe7]-alpha-melanocyte-stimulating hormone significantly increased pigmentation and decreased UV damage in fair-skinned Caucasian volunteers.

  The Journal of investigative dermatology 20060801

• Single nucleotide polymorphism in exon 17 of the insulin receptor gene is not associated with polycystic ovary syndrome in a Korean population.

  Fertility and sterility 20060801

• Enhanced separation of purine and pyrimidine bases using carboxylic multiwalled carbon nanotubes as additive in capillary zone electrophoresis.

  Electrophoresis 20060801

• Base excision repair of both uracil and oxidatively damaged bases contribute to thymidine deprivation-induced radiosensitization.

  International journal of radiation oncology, biology, physics 20060801

• Influence of base stacking and hydrogen bonding on the fluorescence of 2-aminopurine and pyrrolocytosine in nucleic acids.

  Biochemistry 20060801

• Association of atrial natriuretic peptide and type a natriuretic peptide receptor gene polymorphisms with left ventricular mass in human essential hypertension.

  Journal of the American College of Cardiology 20060801

• Cloning, purification and preliminary crystallographic analysis of a conserved hypothetical protein, SA0961 (YlaN), from Staphylococcus aureus.

  Acta crystallographica. Section F, Structural biology and crystallization communications 20060801

• The DNA N-glycosylase MED1 exhibits preference for halogenated pyrimidines and is involved in the cytotoxicity of 5-iododeoxyuridine.

  Cancer research 20060801

• A novel simple QSAR model for the prediction of anti-HIV activity using multiple linear regression analysis.

  Molecular diversity 20060801

• The short vitamin D receptor is associated with increased risk for generalized aggressive periodontitis.

  Journal of clinical periodontology 20060801

• [Dihydropyrimidine dehydrogenase activity and its genetic aberrations].

  Gan to kagaku ryoho. Cancer & chemotherapy 20060801

• Novel tight binding PETT, HEPT and DABO-based non-nucleoside inhibitors of HIV-1 reverse transcriptase.

  Journal of enzyme inhibition and medicinal chemistry 20060801

• Mass spectrometric investigation of anions formed upon free electron attachment to nucleobase molecules and clusters embedded in superfluid helium droplets.

  Physical review letters 20060728

• Role of electron-driven proton-transfer processes in the excited-state deactivation of the adenine-thymine base pair.

  The journal of physical chemistry. A 20060727

• Na+, Mg2+, and Zn2+ binding to all tautomers of adenine, cytosine, and thymine and the eight most stable keto/enol tautomers of guanine: a correlated ab initio quantum chemical study.

  The journal of physical chemistry. B 20060727

• Synthesis, nucleic acid hybridization properties and molecular modelling studies of conformationally restricted 3'-O,4'-C-methylene-linked alpha-L-ribonucleotides.

  Carbohydrate research 20060724

• Base-base interactions in the minor groove of double-stranded DNA.

  The Journal of organic chemistry 20060721

• A novel mutation in the connexin 46 gene (GJA3) causes autosomal dominant zonular pulverulent cataract in a Hispanic family.

  Molecular vision 20060720

• DNA sequence recognition by Hoechst 33258 conjugates of hairpin pyrrole/imidazole polyamides.

  Bioorganic & medicinal chemistry letters 20060715

• Methylation-dependent fragment separation: direct detection of DNA methylation by capillary electrophoresis of PCR products from bisulfite-converted genomic DNA.

  Analytical biochemistry 20060715

• T-rich DNA single strands bind to a preformed site on the bacterial cold shock protein Bs-CspB.

  Journal of molecular biology 20060714

• Ultra-violet light induced changes in DNA dynamics may enhance TT-dimer recognition.

  DNA repair 20060713

• New furan side tetracyclic allopsoralen derivatives: synthesis and photobiological evaluation.

  Journal of medicinal chemistry 20060713

• Efficient photosensitized splitting of the thymine dimer/oxetane unit on its modifying beta-cyclodextrin by a binding electron donor.

  Organic & biomolecular chemistry 20060707

• Methylenetetrahydrofolate reductase gene polymorphisms c.677C/T and c.1298A/C are not associated with open angle glaucoma.

  Molecular vision 20060707

• Photodissociation of thymine.

  Physical chemistry chemical physics : PCCP 20060707

• The role of haemoglobin level in predicting the response to first-line chemotherapy in advanced colorectal cancer patients.

  British journal of cancer 20060703

• The A/T-specific DNA alkylating agent adozelesin inhibits Plasmodium falciparum growth in vitro and protects mice against Plasmodium chabaudi adami infection.

  Molecular and biochemical parasitology 20060701

• Analysis of distribution indicates diverse functions of simple sequence repeats in Mycoplasma genomes.

  Molecular biology and evolution 20060701

• Absence of CYP2B6 promoter -82T>C mutation in Chinese as an additional factor for slow metabolism of drugs commonly used in infections.

  European journal of clinical pharmacology 20060701

• Lysine 63-polyubiquitination guards against translesion synthesis-induced mutations.

  PLoS genetics 20060701

• MDR1 T-129C polymorphism can be predictive of differentiation, and thereby prognosis of colorectal adenocarcinomas in Japanese.

  Biological & pharmaceutical bulletin 20060701

• Hoogsteen base pair formation promotes synthesis opposite the 1,N6-ethenodeoxyadenosine lesion by human DNA polymerase iota.

  Nature structural & molecular biology 20060701

• 5-Fluorouracil and thymine form a crystalline solid solution.

  Acta crystallographica. Section C, Crystal structure communications 20060701

• MPLW515L is a novel somatic activating mutation in myelofibrosis with myeloid metaplasia.

  PLoS medicine 20060701

• Characterization of the tunneling conductance across DNA bases.

  Physical review. E, Statistical, nonlinear, and soft matter physics 20060701

• Nonlinear adsorption isotherm as a tool for understanding and characterizing molecularly imprinted polymers.

  Journal of chromatography. A 20060630

• Synthesis of mixed sequence borane phosphonate DNA.

  Journal of the American Chemical Society 20060628

• Binding of gold clusters with DNA base pairs: a density functional study of neutral and anionic GC-Aun and AT-Aun (n = 4, 8) complexes.

  The journal of physical chemistry. A 20060622

• Product and pulse radiolysis studies on radical-ion splitting of N(1)-C(5')-linked dimer hydrates of 5-substituted uracils by one-electron reduction in anoxic aqueous solution.

  The journal of physical chemistry. B 20060622

• A convenient asymmetric synthesis of a beta-amino ester with additional functionalization as a precursor for peptide nucleic acid (PNA) monomers.

  Molecules (Basel, Switzerland) 20060621

• APE1 genotype and risk of bladder cancer: evidence for effect modification by smoking.

  International journal of cancer 20060615

• Variant IRAK-1 haplotype is associated with increased nuclear factor-kappaB activation and worse outcomes in sepsis.

  American journal of respiratory and critical care medicine 20060615

• Influence of microhydration on the ionization energy thresholds of thymine: comparisons of theoretical calculations with experimental values.

  The journal of physical chemistry. A 20060615

• Thermodynamic, counterion, and hydration effects for the incorporation of locked nucleic acid nucleotides into DNA duplexes.

  Biochemistry 20060613

• Molecular spectroscopy: complexity of excited-state dynamics in DNA.

  Nature 20060608

• Synthesis of a novel ester analog of nucleic acids bearing a serine backbone.

  Bioorganic & medicinal chemistry letters 20060601

• Quantitative structure-activity relationship studies on HEPTs by supervised stochastic resonance.

  Bioorganic & medicinal chemistry letters 20060601

• Determination of the lowest-energy oxidation site in nucleotides: 2'-deoxythymidine 5'-monophosphate anion.

  The journal of physical chemistry. B 20060601

• MSX1 and orofacial clefting with and without tooth agenesis.

  Journal of dental research 20060601

• Metabolic complementarity and genomics of the dual bacterial symbiosis of sharpshooters.

  PLoS biology 20060601

• DNA repair: dynamic defenders against cancer and aging.

  PLoS biology 20060601

• Studying health outcomes in farmworker populations exposed to pesticides.

  Environmental health perspectives 20060601

• Diblock-type supramacromolecule via biocomplementary hydrogen bonding.

  Biomacromolecules 20060601

• Analysis and validation of the phosphorylated metabolites of two anti-human immunodeficiency virus nucleotides (stavudine and didanosine) by pressure-assisted CE-ESI-MS/MS in cell extracts: sensitivity enhancement by the use of perfluorinated acids and alcohols as coaxial sheath-liquid make-up constituents.

  Electrophoresis 20060601

• [Chemical constituents from the south China sea gorgonian coral Subergorgia reticulata].

  Zhong yao cai = Zhongyaocai = Journal of Chinese medicinal materials 20060601

• Microsolvation effects on the electron capturing ability of thymine: thymine-water clusters.

  The Journal of chemical physics 20060528

• Crystal structure of SUMO-3-modified thymine-DNA glycosylase.

  Journal of molecular biology 20060526

• Synthesis and hybridization studies of 2'-amino-alpha-L-LNA and tetracyclic 'locked LNA'.

  The Journal of organic chemistry 20060526

• A novel fan-shaped cataract-microcornea syndrome caused by a mutation of CRYAA in an Indian family.

  Molecular vision 20060522

• Excited-state structural dynamics of 5-fluorouracil.

  The journal of physical chemistry. A 20060518

• The triplet energy of thymine in DNA.

  Journal of the American Chemical Society 20060517

• The crystal structures of dihydropyrimidinases reaffirm the close relationship between cyclic amidohydrolases and explain their substrate specificity.

  The Journal of biological chemistry 20060512

• Novel OPA1 mutations identified in Japanese pedigrees with optic atrophy.

  Molecular vision 20060512

• NMR diffusion and nuclear Overhauser investigation of the hydration properties of thymine: influence of the methyl group.

  Chemical communications (Cambridge, England) 20060507

• Ab initio base-pairing energies of uracil and 5-hydroxyuracil with standard DNA bases at the BSSE-free DFT and MP2 theory levels.

  Organic & biomolecular chemistry 20060507

• A consensus adenine at position -11 of the nontemplate strand of bacterial promoter is important for nucleation of promoter melting.

  The Journal of biological chemistry 20060505

• Characterization of novel Na+-dependent nucleobase transport systems at the blood-testis barrier.

  American journal of physiology. Endocrinology and metabolism 20060501

• Electron inelastic mean free path formula and CSDA-range calculation in biological compounds for low and intermediate energies.

  Applied radiation and isotopes : including data, instrumentation and methods for use in agriculture, industry and medicine 20060501

• Pre- and post-dialysis quantitative dosage of thymidine in urine and plasma of a MNGIE patient by using HPLC-ESI-MS/MS.

  Journal of mass spectrometry : JMS 20060501

• A/T-targeted somatic hypermutation: critique of the mainstream model.

  Trends in biochemical sciences 20060501

• Cloning, purification and preliminary crystallographic analysis of the Bacillus subtilis GTPase YphC-GDP complex.

  Acta crystallographica. Section F, Structural biology and crystallization communications 20060501

• Methylation of p16 and Ras association domain family protein 1a during colorectal malignant transformation.

  Molecular cancer research : MCR 20060501

• The prothrombin 20209 C-->T mutation in Jewish-Moroccan Caucasians: molecular analysis of gain-of-function of 3' end processing.

  Journal of thrombosis and haemostasis : JTH 20060501

• Identification and quantification of a guanine-thymine intrastrand cross-link lesion induced by Cu(II)/H2O2/ascorbate.

  Chemical research in toxicology 20060501

• An approach to analyze mechanisms of intestinal adaptation following total proctocolectomy.

  Journal of gastrointestinal surgery : official journal of the Society for Surgery of the Alimentary Tract 20060501

• Quality evaluation of Cordyceps through simultaneous determination of eleven nucleosides and bases by RP-HPLC.

  Journal of separation science 20060501

• Probing of HIV-1 integrase/DNA interactions using novel analogs of viral DNA.

  The Journal of biological chemistry 20060428

• One-electron oxidation of DNA oligomers that lack guanine: reaction and strand cleavage at remote thymines by long-distance radical cation hopping.

  Journal of the American Chemical Society 20060426

• Methylenetetrahydrofolatereductase (MTHFR) 677C>T polymorphism and open angle glaucoma.

  Molecular vision 20060417

• Presymptomatic genetic diagnosis for consulters from a large Chinese family with juvenile open angle glaucoma.

  Molecular vision 20060417

• Neamine derivatives having a nucleobase with a lysine or an arginine as a linker, their synthesis and evaluation as potential inhibitors for HIV TAR-Tat.

  Bioorganic & medicinal chemistry 20060415

• A triplet mechanism for the formation of cyclobutane pyrimidine dimers in UV-irradiated DNA.

  The journal of physical chemistry. B 20060413

• Stationary phase-induction of G-->T mutations in Escherichia coli.

  Mutation research 20060411

• Repair of thymine glycol by hNth1 and hNeil1 is modulated by base pairing and cis-trans epimerization.

  DNA repair 20060408

• Phosphoramidate and phosphate prodrugs of (-)-beta-D-(2R,4R)-dioxolane-thymine: synthesis, anti-HIV activity and stability studies.

  Bioorganic & medicinal chemistry 20060401

• Remote interactions explain the unusual regioselectivity of lipase from Pseudomonas cepacia toward the secondary hydroxyl of 2'-deoxynucleosides.

  Chembiochem : a European journal of chemical biology 20060401

• The distribution of constitutional and somatic mutations in the neurofibromatosis 2 gene.

  Human mutation 20060401

• Structures of S. aureus thymidylate kinase reveal an atypical active site configuration and an intermediate conformational state upon substrate binding.

  Protein science : a publication of the Protein Society 20060401

• Effects of the common 677C>T mutation of the 5,10-methylenetetrahydrofolate reductase (MTHFR) gene on ovarian responsiveness to recombinant follicle-stimulating hormone.

  American journal of reproductive immunology (New York, N.Y. : 1989) 20060401

• A novel approach to DNA damage assessments: measurement of the thymine glycol lesion.

  Radiation research 20060401

• Singlet oxygen-induced DNA damage.

  Radiation research 20060401

• Photo-induced hole transfer from base to sugar in DNA: relationship to primary radiation damage.

  Radiation research 20060401

• An accurate, high-throughput method for genotyping the -373AnTn polymorphism in the interleukin-6 promoter.

  International journal of immunogenetics 20060401

• Computational and empirical trans-hydrogen bond deuterium isotope shifts suggest that N1-N3 A:U hydrogen bonds of RNA are shorter than those of A:T hydrogen bonds of DNA.

  Journal of biomolecular NMR 20060401

• Practical strategies for discovering regulatory DNA sequence motifs.

  PLoS computational biology 20060401

• Heterotachy in mammalian promoter evolution.

  PLoS genetics 20060401

• Complex Loci in human and mouse genomes.

  PLoS genetics 20060401

• Mice and men: their promoter properties.

  PLoS genetics 20060401

• [An outline of GnRH analogue].

  Nihon rinsho. Japanese journal of clinical medicine 20060401

• Separation of nucleotides with an aqueous mobile phase using pH- and temperature-responsive polymer modified packing materials.

  Analytical sciences : the international journal of the Japan Society for Analytical Chemistry 20060401

• Vibrational Feshbach resonances in uracil and thymine.

  The Journal of chemical physics 20060328

• Base sequence effects on transport in DNA.

  The journal of physical chemistry. B 20060323

• Strong and selective binding of amiloride to thymine base opposite AP sites in DNA duplexes: simultaneous binding to DNA phosphate backbone.

  Chemical communications (Cambridge, England) 20060321

• Recognition-directed orthogonal self-assembly of polymers and nanoparticles on patterned surfaces.

  Journal of the American Chemical Society 20060315

• Crystal structures of the kainate receptor GluR5 ligand binding core dimer with novel GluR5-selective antagonists.

  The Journal of neuroscience : the official journal of the Society for Neuroscience 20060315

• Valence- and dipole-bound anions of the thymine-water complex: ab initio characterization of the potential energy surfaces.

  The journal of physical chemistry. A 20060309

• A new protein superfamily includes two novel 3-methyladenine DNA glycosylases from Bacillus cereus, AlkC and AlkD.

  Molecular microbiology 20060301

• Site-specific replacement of Y356 with 3,4-dihydroxyphenylalanine in the beta2 subunit of E. coli ribonucleotide reductase.

  Journal of the American Chemical Society 20060301

• A novel frameshift mutation in the 5alpha-reductase type 2 gene in Korean sisters with male pseudohermaphroditism.

  Fertility and sterility 20060301

• In vivo characterization of the dTDP-D-desosamine pathway of the megalomicin gene cluster from Micromonospora megalomicea.

  Microbiology (Reading, England) 20060301

• Antitumor activity of sequence-specific alkylating agents: pyrolle-imidazole CBI conjugates with indole linker.

  Cancer science 20060301

• Preparation of carbodiimide-terminated dithiolane self-assembly monolayers as a new DNA-immobilization method.

  Analytical sciences : the international journal of the Japan Society for Analytical Chemistry 20060301

• Promoter methylation of P16, RARbeta, E-cadherin, cyclin A1 and cytoglobin in oral cancer: quantitative evaluation using pyrosequencing.

  British journal of cancer 20060227

• Regioselective and enantiospecific rhodium-catalyzed allylic amination with thymine: synthesis of a new conformationally rigid nucleoside.

  Chemical communications (Cambridge, England) 20060227

• Excited-state structural dynamics of cytosine from resonance Raman spectroscopy.

  The journal of physical chemistry. A 20060223

• MercuryII-mediated formation of thymine-HgII-thymine base pairs in DNA duplexes.

  Journal of the American Chemical Society 20060222

• Synthesis and characterization of a [3-15N]-labeled cis-syn thymine dimer-containing DNA duplex.

  The Journal of organic chemistry 20060217

• Highly stereoselective beta-anomeric glycosidation of a 2'-deoxy syn-5'-configured 4'-spironucleoside.

  The Journal of organic chemistry 20060217

• DNA-protein cross-linking: model systems for pyrimidine-aromatic amino acid cross-linking.

  Organic letters 20060216

• Crystal structures of catalytic complexes of the oxidative DNA/RNA repair enzyme AlkB.

  Nature 20060216

• Myeloperoxidase generates 5-chlorouracil in human atherosclerotic tissue: a potential pathway for somatic mutagenesis by macrophages.

  The Journal of biological chemistry 20060210

• Clinical and molecular analysis of a four-generation Chinese family with aminoglycoside-induced and nonsyndromic hearing loss associated with the mitochondrial 12S rRNA C1494T mutation.

  Biochemical and biophysical research communications 20060210

• Homopairing possibilities of the DNA base thymine and the RNA base uracil: an ab initio density functional theory study.

  The journal of physical chemistry. B 20060209

• PNA-based reagents for the direct and site-specific synthesis of thymine dimer lesions in genomic DNA.

  Journal of the American Chemical Society 20060208

• Low-energy electron scattering from DNA and RNA bases: shape resonances and radiation damage.

  The Journal of chemical physics 20060207

• DNA polymerase iota-dependent translesion replication of uracil containing cyclobutane pyrimidine dimers.

  DNA repair 20060203

• Quantitation of zidovudine triphosphate concentrations from human peripheral blood mononuclear cells by anion exchange solid phase extraction and liquid chromatography-tandem mass spectroscopy; an indirect quantitation methodology.

  Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 20060202

• Assessing the fidelity of ancient DNA sequences amplified from nuclear genes.

  Genetics 20060201

• Activation barriers for DNA alkylation by carcinogenic methane diazonium ions.

  Journal of computational chemistry 20060201

• Monochloramine inhibits ultraviolet B-induced p53 activation and DNA repair response in human fibroblasts.

  Biochimica et biophysica acta 20060201

• A case of amelogenesis imperfecta, cleft lip and palate and polycystic kidney disease.

  Orthodontics & craniofacial research 20060201

• Role of the spacer between the -35 and -10 regions in sigmas promoter selectivity in Escherichia coli.

  Molecular microbiology 20060201

• Effect of homeodomain protein NKX3.1 R52C polymorphism on prostate gland size.

  Urology 20060201

• Description of two new cathepsin C gene mutations in patients with Papillon-Lefèvre syndrome.

  Journal of periodontology 20060201

• Permissive transcriptional activity at the centromere through pockets of DNA hypomethylation.

  PLoS genetics 20060201

• A false note of DNA polymerase iota in the choir of genome caretakers in mammals.

  Biochemistry. Biokhimiia 20060201

• 3'-5' exonuclease activity of human apurinic/apyrimidinic endonuclease 1 towards DNAs containing dNMP and their modified analogs at the 3 end of single strand DNA break.

  Biochemistry. Biokhimiia 20060201

• DNA sequences shaped by selection for stability.

  PLoS genetics 20060201

• The 262T>C promoter polymorphism of the catalase gene is associated with diabetic neuropathy in type 1 diabetic Russian patients.

  Diabetes & metabolism 20060201

• Genotype distribution of estrogen receptor-alpha, catechol-O-methyltransferase, and cytochrome P450 17 gene polymorphisms in Caucasian women with uterine leiomyomas.

  Fertility and sterility 20060201

• Preimplantation genetic diagnosis of leukocyte adhesion deficiency type I.

  Fertility and sterility 20060201

• [BRAF gene mutation in thyroid cancer].

  Polski merkuriusz lekarski : organ Polskiego Towarzystwa Lekarskiego 20060201

• Biomarkers in the molecular pathogenesis of esophageal (Barrett) adenocarcinoma.

  Current oncology (Toronto, Ont.) 20060201

• Overlapping, nonidentical binding sites of different classes of nonpeptide antagonists for the human gonadotropin-releasing hormone receptor.

  Journal of medicinal chemistry 20060126

• Modeling of hydrogen bonds in monohydrated 2,4-dithiothymine: an ab initio and AIM study.

  The journal of physical chemistry. B 20060126

• DNA polymerase catalysis in the absence of Watson-Crick hydrogen bonds: analysis by single-turnover kinetics.

  Biochemistry 20060124

• Model studies of the (6-4) photoproduct photoreactivation: efficient photosensitized splitting of thymine oxetane units by covalently linked tryptophan in high polarity solvents.

  Organic & biomolecular chemistry 20060121

• DNA-induced switch from independent to sequential dTTP hydrolysis in the bacteriophage T7 DNA helicase.

  Molecular cell 20060120

• Singlet excited-state behavior of uracil and thymine in aqueous solution: a combined experimental and computational study of 11 uracil derivatives.

  Journal of the American Chemical Society 20060118

• The effect of surgically induced ischaemia on gene expression in a colorectal cancer xenograft model.

  British journal of cancer 20060116

• Nucleobase orientation and ordering in films of single-stranded DNA on gold.

  Journal of the American Chemical Society 20060111

• The crystal structure of mismatch-specific uracil-DNA glycosylase (MUG) from Deinococcus radiodurans reveals a novel catalytic residue and broad substrate specificity.

  The Journal of biological chemistry 20060106

• Base excision repair by hNTH1 and hOGG1: a two edged sword in the processing of DNA damage in gamma-irradiated human cells.

  DNA repair 20060105

• Host cell reactivation of plasmids containing oxidative DNA lesions is defective in Cockayne syndrome but normal in UV-sensitive syndrome fibroblasts.

  DNA repair 20060105

• Preparative synthesis of dTDP-L-rhamnose through combined enzymatic pathways.

  Biotechnology and bioengineering 20060105

• Inferring parameters shaping amino acid usage in prokaryotic genomes via Bayesian MCMC methods.

  Molecular biology and evolution 20060101

• Association of E-cadherin gene 3'-UTR C/T polymorphism with primary open angle glaucoma.

  Ophthalmic research 20060101

• Radical production and DNA damage induced by carcinogenic 4-hydrazinobenzoic acid, an ingredient of mushroom Agaricus bisporus.

  Free radical research 20060101

• High-level expression of IMP-5 carbapenemase owing to point mutation in the -35 promoter region of class 1 integron among Pseudomonas aeruginosa clinical isolates.

  International journal of antimicrobial agents 20060101

• Distinct modes of DNA damage response in S. pombe G0 and vegetative cells.

  Genes to cells : devoted to molecular & cellular mechanisms 20060101

• Stepwise translocation of Dpo4 polymerase during error-free bypass of an oxoG lesion.

  PLoS biology 20060101

• Congenital heart defects, maternal homocysteine, smoking, and the 677 C>T polymorphism in the methylenetetrahydrofolate reductase gene: evaluating gene-environment interactions.

  American journal of obstetrics and gynecology 20060101

• Contributions of PTCH gene variants to isolated cleft lip and palate.

  The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association 20060101

• Beta-ureidopropionase deficiency presenting with febrile status epilepticus.

  Epilepsia 20060101

• Correlations of HBV genotypes, mutations affecting HBeAg expression and HBeAg/ anti-HBe status in HBV carriers.

  International journal of medical sciences 20060101

• Djinn Lite: a tool for customised gene transcript modelling, annotation-data enrichment and exploration.

  BMC bioinformatics 20060101

• Do Craniosynostosis syndrome phenotypes with both FGFR2 and TWIST mutations have a worse clinical outcome?

  The Journal of craniofacial surgery 20060101

• Synthesis and antiviral evaluation of novel 4'-hydroxymethyl branched apiosyl nucleosides.

  Nucleosides, nucleotides & nucleic acids 20060101

• Evolution of the NANOG pseudogene family in the human and chimpanzee genomes.

  BMC evolutionary biology 20060101

• Simulation of DNA bases in water: Comparison of the Monte Carlo algorithm with molecular mechanics force fields.

  Biochemistry. Biokhimiia 20060101

• Identification of the alpha and beta anomers of 1-(2-deoxy-D-erythro-pentofuranosyl)-oxaluric acid at the site of riboflavin-mediated photooxidation of guanine in 2'-deoxyguanosine and thymidylyl-(3'-5')-2'-deoxyguanosine.

  Photochemistry and photobiology 20060101

• Association of an estrogen receptor-alpha gene polymorphism with left ventricular mass.

  Blood pressure 20060101

• Variations in gene organization and DNA uptake signal sequence in the folP region between commensal and pathogenic Neisseria species.

  BMC microbiology 20060101

• Stationary phase expression of the arginine biosynthetic operon argCBH in Escherichia coli.

  BMC microbiology 20060101

• Integrating protein structures and precomputed genealogies in the Magnum database: examples with cellular retinoid binding proteins.

  BMC bioinformatics 20060101

• No evidence for an association between the -871 T/C promoter polymorphism in the B-cell-activating factor gene and primary Sjögren's syndrome.

  Arthritis research & therapy 20060101

• Polaronic semiconductor behavior of long-range charge transfer in DNA oligomers in solution: controlling barriers to long-distance radical cation migration in DNA with thymine analogs.

  Faraday discussions 20060101

• The effect of a methyl or 2-fluoroethyl substituent at the N-3 position of thymidine, 3'-fluoro-3'-deoxythymidine and 1-beta-D-arabinosylthymine on their antiviral and cytostatic activity in cell culture.

  Antiviral chemistry & chemotherapy 20060101

• IFNGR1 single nucleotide polymorphisms in rheumatoid arthritis.

  Arthritis research & therapy 20060101

• Cytosine methylation and DNA repair.

  Current topics in microbiology and immunology 20060101

• Differentiation of estriol glucuronide isomers by chemical derivatization and electrospray tandem mass spectrometry.

  Rapid communications in mass spectrometry : RCM 20060101

• A high-throughput screen identifying sequence and promiscuity characteristics of the loxP spacer region in Cre-mediated recombination.

  BMC genomics 20060101

• Pyrimidine base supplementation effects curdlan production in Agrobacterium sp. ATCC 31749.

  Journal of basic microbiology 20060101

• Functional characterisation of the regulation of CAAT enhancer binding protein alpha by GSK-3 phosphorylation of Threonines 222/226.

  BMC molecular biology 20060101

• Utility of BRAF V600E mutation detection in cytologically indeterminate thyroid nodules.

  CytoJournal 20060101

• Flexible promoter architecture requirements for coactivator recruitment.

  BMC molecular biology 20060101

• Molecular characterization and exclusion of porcine GUSB as a candidate gene for congenital hernia inguinalis/scrotalis.

  BMC veterinary research 20060101

• Simple tandem repeat (TTTA)n polymorphism in CYP19 (aromatase) gene and breast cancer risk in Nigerian women.

  Journal of carcinogenesis 20060101

• Mutation analysis of the MSX1 gene exons and intron in patients with nonsyndromic cleft lip and palate.

  Stomatologija 20060101

• Mitochondrial genome anatomy and species-specific lifespan.

  Rejuvenation research 20060101

• Automatic generation of gene finders for eukaryotic species.

  BMC bioinformatics 20060101

• Demonstration of two novel methods for predicting functional siRNA efficiency.

  BMC bioinformatics 20060101

• A protein evolution model with independent sites that reproduces site-specific amino acid distributions from the Protein Data Bank.

  BMC evolutionary biology 20060101

• Locked nucleoside analogues expand the potential of DNAzymes to cleave structured RNA targets.

  BMC molecular biology 20060101

• Characterization of Escherichia coli translesion synthesis polymerases and their accessory factors.

  Methods in enzymology 20060101

• Live bacterial vaccines--a review and identification of potential hazards.

  Microbial cell factories 20060101

• The role of thymidine phosphorylase and uridine phosphorylase in (fluoro)pyrimidine metabolism in peripheral blood mononuclear cells.

  The international journal of biochemistry & cell biology 20060101

• Identification of novel mutant PAX6 alleles in Indian cases of familial aniridia.

  BMC ophthalmology 20060101

• Generation of non-genomic oligonucleotide tag sequences for RNA template-specific PCR.

  BMC biotechnology 20060101

• Comparative EST analysis provides insights into the basal aquatic fungus Blastocladiella emersonii.

  BMC genomics 20060101

• Recognition of oxidized thymine base on the single-stranded DNA by replication protein A.

  Nucleosides, nucleotides & nucleic acids 20060101

• NMR spectroscopic study of a DNA duplex with mercury-mediated T-T base pairs.

  Nucleosides, nucleotides & nucleic acids 20060101

• The complete sequence of the mitochondrial genome of Nautilus macromphalus (Mollusca: Cephalopoda).

  BMC genomics 20060101

• Association of the FCRL3 gene with rheumatoid arthritis: a further example of population specificity?

  Arthritis research & therapy 20060101

• Do host genetic traits in the bacterial sensing system play a role in the development of Chlamydia trachomatis-associated tubal pathology in subfertile women?

  BMC infectious diseases 20060101

• The -56T HLA-G promoter polymorphism is not associated with pre-eclampsia/eclampsia in Australian and New Zealand women.

  Hypertension in pregnancy 20060101

• MTHFR C677T polymorphism is not associated with placental abruption or preeclampsia in Finnish women.

  Hypertension in pregnancy 20060101

• Role of C825T polymorphism of GNbeta3 gene in preeclampsia.

  Hypertension in pregnancy 20060101

• [Characteristics of lysogenic induction of bacteriocins in thymine mutants of Erwinia carotovora].

  Mikrobiolohichnyi zhurnal (Kiev, Ukraine : 1993) 20060101

• Antiretroviral agents during pregnancy: consequences on hematologic parameters in HIV-exposed, uninfected newborn infant.

  European journal of obstetrics, gynecology, and reproductive biology 20060101

• The roles of specific glycosylases in determining the mutagenic consequences of clustered DNA base damage.

  Nucleic acids research 20060101

• The practical and pedagogical advantages of an ambigraphic nucleic acid notation.

  Nucleosides, nucleotides & nucleic acids 20060101

• Random mutagenesis in Corynebacterium glutamicum ATCC 13032 using an IS6100-based transposon vector identified the last unknown gene in the histidine biosynthesis pathway.

  BMC genomics 20060101

• Simple synthesis and anti-HIV activity of novel 3'-vinyl branched apiosyl pyrimidine nucleosides.

  Nucleosides, nucleotides & nucleic acids 20060101

• Simple synthesis of novel acyclic (e)-bromovinyl nucleosides as potential antiviral agents.

  Nucleosides, nucleotides & nucleic acids 20060101

• Mapping of the methylation pattern of the hMSH2 promoter in colon cancer, using bisulfite genomic sequencing.

  Journal of carcinogenesis 20060101

• The emergence and diffusion of DNA microarray technology.

  Journal of biomedical discovery and collaboration 20060101

• Assessment of whole genome amplification-induced bias through high-throughput, massively parallel whole genome sequencing.

  BMC genomics 20060101

• Fast index based algorithms and software for matching position specific scoring matrices.

  BMC bioinformatics 20060101

• Genetics and proteomics: deciphering gene association studies in critical illness.

  Critical care (London, England) 20060101

• The first salen-type ligands derived from 3',5'-diamino-3',5'-dideoxythymidine and -dideoxyxylothymidine and their corresponding copper(II) complexes.

  Beilstein journal of organic chemistry 20060101

• Hereditary hyper-ACE-emia due to the Pro1199Leu mutation of somatic ACE as a potential pitfall in diagnosis: a first family outside Europe.

  Clinical chemistry and laboratory medicine 20060101

• Molecular assay for detection of the common carnitine palmitoyltransferase 1A 1436(C>T) mutation.

  Clinical chemistry and laboratory medicine 20060101

• The complete mitochondrial genome of the common sea slater, Ligia oceanica (Crustacea, Isopoda) bears a novel gene order and unusual control region features.

  BMC genomics 20060101

• Short G-rich oligonucleotides as a potential therapeutic for Huntington's Disease.

  BMC neuroscience 20060101

• Establishment of endolithic populations of extremophilic Cyanidiales (Rhodophyta).

  BMC evolutionary biology 20060101

• [The effect of extracellular metabolites on the frequency of Thy+ revertants in Salmonella typhimurium populations].

  Mikrobiologiia 20060101

• Evaluation of NTHL1, NEIL1, NEIL2, MPG, TDG, UNG and SMUG1 genes in familial colorectal cancer predisposition.

  BMC cancer 20060101

• [Nucleoside-5'-triphosphate hydrolysis in the liver and kidney of rats with chronic alloxan diabetes].

  Biomeditsinskaia khimiia 20060101

• Genotyping faecal samples of Bengal tiger Panthera tigris tigris for population estimation: a pilot study.

  BMC genetics 20060101

• Structure of vaccinia virus thymidine kinase in complex with dTTP: insights for drug design.

  BMC structural biology 20060101

• A neonate with recurrent vomiting and generalized hypotonia diagnosed with a deficiency of dihydropyrimidine dehydrogenase.

  Nucleosides, nucleotides & nucleic acids 20060101

• A pivotal role for beta-aminoisobutyric acid and oxidative stress in dihydropyrimidine dehydrogenase deficiency?

  Nucleosides, nucleotides & nucleic acids 20060101

• AZT and AZT-monophosphate prodrugs incorporating HIV-protease substrate fragment: synthesis and evaluation as specific drug delivery systems.

  Antiviral chemistry & chemotherapy 20060101

• Association of MTHFR gene polymorphisms with breast cancer survival.

  BMC cancer 20060101

• Recent advances in coumarins and 1-azacoumarins as versatile biodynamic agents.

  Current medicinal chemistry 20060101

• The complete mitochondrial genome of the sea spider Nymphon gracile (Arthropoda: Pycnogonida).

  BMC genomics 20060101

• Mitochondrial oxidative stress and nitrate tolerance--comparison of nitroglycerin and pentaerithrityl tetranitrate in Mn-SOD+/- mice.

  BMC cardiovascular disorders 20060101

• Triplex staples: DNA double-strand cross-linking at internal and terminal sites using psoralen-containing triplex-forming oligonucleotides.

  Bioconjugate chemistry 20060101

• Effects of triiodo-thyronine on angiotensin-induced cardiomyocyte hypertrophy: reversal of increased beta-myosin heavy chain gene expression.

  Canadian journal of physiology and pharmacology 20060101

• Non coding RNA and brain.

  BMC neuroscience 20060101

• Dynamic variable selection in SNP genotype autocalling from APEX microarray data.

  BMC bioinformatics 20060101

• Analysis of gene expression and chemoresistance of CD133+ cancer stem cells in glioblastoma.

  Molecular cancer 20060101

• New designs for DNA bases: expanded DNAs and oligofluorosides.

  Nucleic acids symposium series (2004) 20060101

• Structural analyses on the mercuryII-mediated T-T base pair.

  Nucleic acids symposium series (2004) 20060101

• Use of abasic site-containing DNA for electrochemical SNPs detection.

  Nucleic acids symposium series (2004) 20060101

• Synthesis and property of DNA labeled with fluorescent acridone.

  Nucleic acids symposium series (2004) 20060101

• Detection of photoinduced electron transfer from Sso7d to DNA.

  Nucleic acids symposium series (2004) 20060101

• Photoinduced repair of a thymine dimer in DNA via carbazole nucleoside.

  Nucleic acids symposium series (2004) 20060101

• Site-specific binding of chelerythrine to single cytosine and thymine bulges in DNA hairpins.

  Nucleic acids symposium series (2004) 20060101

• Detection of T:T mismatch base pair by fluorescence spectral change upon addition of mercury (II) cation: toward the efficient analyses of single nucleotide polymorphism.

  Nucleic acids symposium series (2004) 20060101

• Characterization of the binding of distamycin A to damaged DNA: a comparison with the DNA recognition of the human DDB protein.

  Nucleic acids symposium series (2004) 20060101

• Electrochemical SNP detection.

  Nucleic acids symposium series (2004) 20060101

• Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis.

  BMC genomics 20060101

• PAMAM dendrimers and branched polyethyleneglycol (nanoparticles) prodrugs of (-)-beta-D-(2R, 4R)-dioxolane-thymine (DOT) and their anti-HIV activity.

  Antiviral chemistry & chemotherapy 20060101

• Hydrated thymine cluster in the supersonic gas jet.

  Radiation protection dosimetry 20060101

• Association of the 5-HT2A receptor gene polymorphism 102T/C with ischemic stroke.

  Journal of molecular neuroscience : MN 20060101

• Characterization of activation energy distribution for ultraviolet irradiation of T-rich oligonucleotide using high-performance liquid chromatography electrospray ionization mass spectrometry tandem mass spectrometry.

  European journal of mass spectrometry (Chichester, England) 20060101

• New Dihydro OO'Bis(Salicylidene) 2,2' Aminobenzothiazolyl Borate Complexes: Kinetic and Voltammetric Studies of Dimethyltin Copper Complex with Guanine, Adenine, and Calf Thymus DNA.

  Bioinorganic chemistry and applications 20060101

• On relationship of Z-curve and Fourier approaches for DNA coding sequence classification.

  Bioinformation 20060101

• DNA hypermethylation and partial gene silencing of human thymine- DNA glycosylase in multiple myeloma cell lines.

  Epigenetics 20060101

• Intramolecular interactions in the triplet excited states of benzophenone-thymine dyads.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20051223

• Liquid-crystalline supramolecular polymers formed through complementary nucleobase-pair interactions.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20051223

• The radiation responsive promoter of the Deinococcus radiodurans pprA gene.

  Gene 20051219

• Pre-steady-state kinetic characterization of the DinB homologue DNA polymerase of Sulfolobus solfataricus.

  The Journal of biological chemistry 20051209

• Complexes of DNA bases and Watson-Crick base pairs with small neutral gold clusters.

  The journal of physical chemistry. B 20051208

• A selective, noncovalent assay for base flipping in DNA.

  Journal of the American Chemical Society 20051207

• Light-induced surface wettability of a tethered DNA base.

  Langmuir : the ACS journal of surfaces and colloids 20051206

• Specific adducts recognised by a monoclonal antibody against cisplatin-modified DNA.

  Biochemical pharmacology 20051205

• Replication origin of mitochondrial DNA in insects.

  Genetics 20051201

• Contribution of the collagen I alpha1 and vitamin D receptor genes to the risk of hip fracture in elderly women.

  The Journal of clinical endocrinology and metabolism 20051201

• Oxetane locked thymidine in the Dickerson-Drew dodecamer causes local base pairing distortions -- an NMR structure and hydration study.

  Journal of biomolecular structure & dynamics 20051201

• Rational genomics I: antisense open reading frames and codon bias in short-chain oxido reductase enzymes and the evolution of the genetic code.

  Proteins 20051201

• Synthesis and properties of aminopropyl nucleic acids.

  Chembiochem : a European journal of chemical biology 20051201

• Impaired removal of 8-hydroxydeoxyguanosine induced by UVB radiation in naevoid basal cell carcinoma syndrome cells.

  The British journal of dermatology 20051201

• Alpha 2 integrin +807 polymorphism in drug-induced gingival overgrowth.

  Journal of dental research 20051201

• Structure of the substrate complex of thymidine kinase from Ureaplasma urealyticum and investigations of possible drug targets for the enzyme.

  The FEBS journal 20051201

• Genetic variation in the hepatic lipase gene is associated with combined hyperlipidemia, plasma lipid concentrations, and lipid-lowering drug response.

  American heart journal 20051201

• Synthesis and antiviral evaluation of novel 4'-hydroxymethyl branched thioapiosyl nucleosides.

  Archiv der Pharmazie 20051201

• Differential susceptibility to hypertension is due to selection during the out-of-Africa expansion.

  PLoS genetics 20051201

• PhyloGibbs: a Gibbs sampling motif finder that incorporates phylogeny.

  PLoS computational biology 20051201

• [Vibrational spectra of thymine calculated from DFT and their comparison with experimental results].

  Guang pu xue yu guang pu fen xi = Guang pu 20051201

• Reaction of substituted pyrimidines with photochemically generated t-BuO* radicals.

  Indian journal of biochemistry & biophysics 20051201

• Molecular mechanisms of autosomal dominant and recessive distal renal tubular acidosis caused by SLC4A1 (AE1) mutations.

  Journal of molecular and genetic medicine : an international journal of biomedical research 20051201

• Effect of interfacial molecular recognition of non-surface-active species on the main characteristics of monolayers.

  Advances in colloid and interface science 20051130

• Binding of the global response regulator protein CovR to the sag promoter of Streptococcus pyogenes reveals a new mode of CovR-DNA interaction.

  The Journal of biological chemistry 20051125

• Efficient primer strand extension beyond oxadiazole carboxamide nucleobases.

  Journal of the American Chemical Society 20051123

• A thymine isostere in the templating position disrupts assembly of the closed DNA polymerase beta ternary complex.

  Biochemistry 20051122

• Role of loop residues and cations on the formation and stability of dimeric DNA G-quadruplexes.

  Biochemistry 20051122

• DNA polymerases eta and kappa are responsible for error-free translesion DNA synthesis activity over a cis-syn thymine dimer in Xenopus laevis oocyte extracts.

  DNA repair 20051121

• Roles of base excision repair enzymes Nth1p and Apn2p from Schizosaccharomyces pombe in processing alkylation and oxidative DNA damage.

  DNA repair 20051121

• Experimental advances for high-speed evaluation of electron densities.

  The journal of physical chemistry. A 20051117

• Ionization spectroscopy of a DNA base: vacuum-ultraviolet mass-analyzed threshold ionization spectroscopy of jet-cooled thymine.

  Journal of the American Chemical Society 20051116

• Stimuli responsive surfaces through recognition-mediated polymer modification.

  Chemical communications (Cambridge, England) 20051107

• The 5-Me of thyminyl (T) interaction with the neighboring nucleobases dictate the relative stability of isosequential DNA-RNA hybrid duplexes.

  Organic & biomolecular chemistry 20051107

• Association studies of the adenosine A2a receptor (1976T > C) genetic polymorphism in Parkinson's disease and schizophrenia.

  Journal of neural transmission (Vienna, Austria : 1996) 20051101

• Simultaneous high performance liquid chromatographic separation of purines, pyrimidines, N-acetylated amino acids, and dicarboxylic acids for the chemical diagnosis of inborn errors of metabolism.

  Clinical biochemistry 20051101

• Atropisomeric property of 1-(2,6-difluorobenzyl)-3-[(2R)-amino-2-phenethyl]-5-(2-fluoro-3-methoxyphenyl)-6-methyluracil.

  Chirality 20051101

• Investigation of the initial fragmentation of oligodeoxynucleotides in a quadrupole ion trap: charge level-related base loss.

  Journal of the American Society for Mass Spectrometry 20051101

• MMP20 active-site mutation in hypomaturation amelogenesis imperfecta.

  Journal of dental research 20051101

• CD14 and TLR4 gene polymorphisms in adult periodontitis.

  Journal of dental research 20051101

• Probing the active site tightness of DNA polymerase in subangstrom increments.

  Proceedings of the National Academy of Sciences of the United States of America 20051101

• Negative-mode MALDI-TOF/TOF-MS of oligosaccharides labeled with 2-aminobenzamide.

  Analytical chemistry 20051101

• Interaction of phenazine with water and DNA bases.

  Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy 20051101

• Assessment of low linear energy transfer radiation-induced bystander mutagenesis in a three-dimensional culture model.

  Cancer research 20051101

• Synthesis of C-nucleosides designed to participate in triplex formation with native DNA: specific recognition of an A:T base pair in DNA.

  The Journal of organic chemistry 20051028

• Efficient exact exchange approximations in density-functional theory.

  The Journal of chemical physics 20051022

• Biosynthesis of TDP-D-desosamine: identification of a strategy for C4 deoxygenation.

  Angewandte Chemie (International ed. in English) 20051021

• The influence of microhydration on the ionization energy thresholds of uracil and thymine.

  The journal of physical chemistry. A 20051020

• M.TaqI facilitates the base flipping via an unusual DNA backbone conformation.

  Biopolymers 20051015

• Infantile onset spinocerebellar ataxia is caused by recessive mutations in mitochondrial proteins Twinkle and Twinky.

  Human molecular genetics 20051015

• Hypermutation at A-T base pairs: the A nucleotide replacement spectrum is affected by adjacent nucleotides and there is no reverse complementarity of sequences flanking mutated A and T nucleotides.

  Journal of immunology (Baltimore, Md. : 1950) 20051015

• Fragmentation dynamics of condensed phase thymine by low-energy (10-200 eV) heavy-ion impact.

  The Journal of chemical physics 20051008

• Stabilisation of nucleic acid secondary structures by oligonucleotides with an additional nucleobase; synthesis and incorporation of 2'-deoxy-2'-C-(2-(thymine-1-yl)ethyl)uridine.

  Organic & biomolecular chemistry 20051007

• Modulation of base selectivity for a base-discriminating fluorescent nucleobase by addition of mercury ion.

  Bioorganic & medicinal chemistry letters 20051001

• Suggestive association between the C825T polymorphism of the G-protein beta3 subunit gene (GNB3) and clinical improvement with antipsychotics in schizophrenia.

  European neuropsychopharmacology : the journal of the European College of Neuropsychopharmacology 20051001

• EPR study of a copper impurity center in a single crystal of 2-thiothymine.

  Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy 20051001

• Ferulic acid stabilizes a solution of vitamins C and E and doubles its photoprotection of skin.

  The Journal of investigative dermatology 20051001

• Structures of two minor-groove-binding quinolinium quaternary salts complexed with d(CGCGAATTCGCG)(2) at 1.6 and 1.8 Angstrom resolution.

  Acta crystallographica. Section D, Biological crystallography 20051001

• MethylMapper: a method for high-throughput, multilocus bisulfite sequence analysis and reporting.

  BioTechniques 20051001

• SNPdetector: a software tool for sensitive and accurate SNP detection.

  PLoS computational biology 20051001

• Recurrent streptococcal hepatic abscesses in a 46-year-old woman.

  Annals of allergy, asthma & immunology : official publication of the American College of Allergy, Asthma, & Immunology 20051001

• The efficiency of hypoxanthine excision by alkyladenine DNA glycosylase is altered by changes in nearest neighbor bases.

  DNA repair 20050928

• Bond selective dissociative electron attachment to thymine.

  The Journal of chemical physics 20050922

• PNA C-C+ i-motif: superior stability of PNA TC8 tetraplexes compared to DNA TC8 tetraplexes at low pH.

  Chemical communications (Cambridge, England) 20050914

• [The first genetically supported case of chronic benign pemphigus (Hailey-Hailey disease in Hungary].

  Orvosi hetilap 20050911

• Association of polymorphism of tumor necrosis factor-alpha gene promoter region with outcome of hepatitis B virus infection.

  World journal of gastroenterology 20050907

• Escherichia coli RecQ helicase: a player in thymineless death.

  Mutation research 20050904

• Recs preventing wrecks.

  Mutation research 20050904

• DNA binding selectivity of MeCP2 due to a requirement for A/T sequences adjacent to methyl-CpG.

  Molecular cell 20050902

• Structural features of a central mismatch in oligonucleotide hybrid duplexes visualized via Raman spectroscopy: model system for evaluation of potential 'antisense' drugs.

  Biopolymers 20050901

• Glutamine inhibits cytokine-induced apoptosis in human colonic epithelial cells via the pyrimidine pathway.

  American journal of physiology. Gastrointestinal and liver physiology 20050901

• The 825C/T polymorphism of G-protein beta3 subunit gene and risk of ischaemic stroke.

  Journal of human hypertension 20050901

• Association of mitochondrial deoxyribonucleic acid 16189 variant (T->C transition) with metabolic syndrome in Chinese adults.

  The Journal of clinical endocrinology and metabolism 20050901

• Upstream transcription factor-1 gene polymorphism is associated with increased adipocyte lipolysis.

  The Journal of clinical endocrinology and metabolism 20050901

• High prevalence and possible de novo formation of BRAF mutation in metastasized papillary thyroid cancer in lymph nodes.

  The Journal of clinical endocrinology and metabolism 20050901

• Four-color multiplex reverse transcription polymerase chain reaction--overcoming its limitations.

  Analytical biochemistry 20050901

• Novel RAG1 mutation in a case of severe combined immunodeficiency.

  Pediatrics 20050901

• Polymerase chain reaction inhibition assay documenting the amotosalen-based photochemical pathogen inactivation process of platelet concentrates.

  Transfusion 20050901

• Recognition and incision of gamma-radiation-induced cross-linked guanine-thymine tandem lesion G[8,5-Me]T by UvrABC nuclease.

  Chemical research in toxicology 20050901

• Enhancement of the in vitro transcription by T7 RNA polymerase of short DNA templates containing oxidative thymine lesions.

  Comptes rendus biologies 20050901

• [Identification of two novel mutations in ADAMTS13 gene in a patient with hereditary thrombotic thrombocytopenic purpura].

  Zhonghua xue ye xue za zhi = Zhonghua xueyexue zazhi 20050901

• Bond- and site-selective loss of H- from pyrimidine bases.

  Physical review letters 20050826

• Base stacking controls excited-state dynamics in A.T DNA.

  Nature 20050825

• G-quartet-induced nanoparticle assembly.

  Journal of the American Chemical Society 20050824

• Synthesis of nucleoside analogues bearing the five naturally occurring nucleic acid bases built on a 2-oxabicylo[3.1.0]hexane scaffold.

  The Journal of organic chemistry 20050819

• Binding of MutS mismatch repair protein to DNA containing UV photoproducts, 'mismatched' opposite Watson--Crick and novel nucleotides, in different DNA sequence contexts.

  DNA repair 20050815

• Control of dTTP pool size by anaphase promoting complex/cyclosome is essential for the maintenance of genetic stability.

  Genes & development 20050815

• On the structure and desorption dynamics of DNA bases adsorbed on gold: a temperature-programmed study.

  The journal of physical chemistry. B 20050811

• Kinetic evidence for interaction of human immunodeficiency virus type 1 reverse transcriptase with the 3'-OH of the incoming dTTP substrate.

  Biochemistry 20050809

• Effect of DNA polymerase beta loop variants on discrimination of O6-methyldeoxyguanosine modification present in the nucleotide versus template substrate.

  Biochemistry 20050802

• Theoretical study of molecular recognition by Hoechst 33258 derivatives.

  Journal of biomolecular structure & dynamics 20050801

• Mechanism of site-specific DNA damage induced by ozone.

  Mutation research 20050801

• A functional interleukin-1 beta gene polymorphism is associated with chronic periodontitis in a sample of Brazilian individuals.

  Journal of periodontal research 20050801

• An inverse substrate orientation for the regioselective acylation of 3',5'-diaminonucleosides catalyzed by Candida antarctica lipase B?

  Chembiochem : a European journal of chemical biology 20050801

• An enzyme module system for the synthesis of dTDP-activated deoxysugars from dTMP and sucrose.

  Chembiochem : a European journal of chemical biology 20050801

• E-selectin A561C and G98T polymorphisms influence susceptibility and course of multiple sclerosis.

  Journal of neuroimmunology 20050801

• 249ser p53 mutation in the serum of black southern African patients with hepatocellular carcinoma.

  Journal of gastroenterology and hepatology 20050801

• Photosensitization of DNA by dipicolinic acid, a major component of spores of Bacillus species.

  Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 20050801

• Aptameric GT oligomers need to be complexed to ethoxylated polyethylenimine as pre-paired duplexes to efficiently exert their cytotoxic activity in human lymphoblastic cancer cells.

  Biochimie 20050801

• Nonnucleoside HIV-1 reverse-transcriptase inhibitors, part 5. Synthesis and anti-HIV-1 activity of novel 6-naphthylthio HEPT analogues.

  Chemical & pharmaceutical bulletin 20050801

• Epigenetic silencing of the MGMT gene in cancer.

  Biochemistry and cell biology = Biochimie et biologie cellulaire 20050801

• 'In silico' design of potential anti-HIV actives using fragment descriptors.

  Combinatorial chemistry & high throughput screening 20050801

• Prediction of transcriptional terminators in Bacillus subtilis and related species.

  PLoS computational biology 20050801

• Diabetes insipidus in mice with a mutation in aquaporin-2.

  PLoS genetics 20050801

• Photosensitizing properties of 6-methoxy-2-naphthylacetic acid, the major metabolite of the phototoxic non-steroidal anti-inflammatory and analgesic drug nabumetone.

  Die Pharmazie 20050801

• Takayasu arteritis with high titre of antiphospholipid antibodies and MTHFR Polymorphism.

  Journal of thrombosis and thrombolysis 20050801

• A single nucleotide polymorphism in the sheep kappa-casein coding region.

  The Journal of dairy research 20050801

• Molecular recognition kinetics of nonsurface active pyrimidine derivatives dissolved in the aqueous subphase by an amphiphilic melamine type monolayer: A theoretical approach.

  The journal of physical chemistry. B 20050728

• The structure of the human AGT protein bound to DNA and its implications for damage detection.

  Journal of molecular biology 20050722

• N,N'-Bis(3-aminopropyl)-2,7-diamino-1,8-naphthyridine stabilized a single pyrimidine bulge in duplex DNA.

  Bioorganic & medicinal chemistry 20050715

• DNA adducts of the enantiomers of the Pt(II) complexes of the ahaz ligand (ahaz=3-aminohexahydroazepine) and recognition of these adducts by HMG domain proteins.

  Biochemical and biophysical research communications 20050715

• Mechanochemistry of t7 DNA helicase.

  Journal of molecular biology 20050715

• Duplex strand formation using alternating copolymers.

  Chemical communications (Cambridge, England) 20050714

• Structural and energetic characterization of a DNA nucleoside pair and its anion: deoxyriboadenosine (dA)-deoxyribothymidine (dT).

  The journal of physical chemistry. B 20050714

• Transcription promotes guanine to thymine mutations in the non-transcribed strand of an Escherichia coli gene.

  DNA repair 20050712

• The bacterial YbaK protein is a Cys-tRNAPro and Cys-tRNA Cys deacylase.

  The Journal of biological chemistry 20050708

• Template-directed DNA photoligation via alpha-5-cyanovinyldeoxyuridine.

  Organic letters 20050707

• The stabilizing contribution of thymine in duplexes of (dA)24 with (dU)24, (dT)24, (dU12-dT12), (dU-dT)12, (dU2-dT2)6, or (dU3-dT3)4: nearest neighbor and next-nearest neighbor effects.

  Biopolymers 20050701

• Pediatric gallstone disease in familial hypobetalipoproteinemia.

  Journal of hepatology 20050701

• Precise temporal modulation in the response of the SOS DNA repair network in individual bacteria.

  PLoS biology 20050701

• Mutational activation of BRAF is not a major event in sporadic childhood papillary thyroid carcinoma.

  Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 20050701

• The guanine-thymine dinucleotide repeat polymorphism within the tenascin-C gene is associated with achilles tendon injuries.

  The American journal of sports medicine 20050701

• TNF promoter polymorphisms and modulation of growth retardation and disease severity in pediatric Crohn's disease.

  The American journal of gastroenterology 20050701

• Structural basis for the changed substrate specificity of Drosophila melanogaster deoxyribonucleoside kinase mutant N64D.

  The FEBS journal 20050701

• Fog2 is required for normal diaphragm and lung development in mice and humans.

  PLoS genetics 20050701

• Photo-cross-linked immobilization of polyelectrolytes for enzymatic construction of conductive nanocomposites.

  Journal of the American Chemical Society 20050629

• Determination of thymidine phosphorylase activity by a non-radiochemical assay using reversed-phase high-performance liquid chromatography.

  Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 20050625

• Potential energy surfaces of an adenine-thymine base pair and its methylated analogue in the presence of one and two water molecules: molecular mechanics and correlated ab initio study.

  The journal of physical chemistry. B 20050623

• The DNA mismatch repair gene hMSH2 is a potent coactivator of oestrogen receptor alpha.

  British journal of cancer 20050620

• Crystal structure of thymine DNA glycosylase conjugated to SUMO-1.

  Nature 20050616

• Probing the Watson-Crick, wobble, and sugar-edge hydrogen bond sites of uracil and thymine.

  The journal of physical chemistry. A 20050616

• DNA polymerase eta contributes to strand bias of mutations of A versus T in immunoglobulin genes.

  Journal of immunology (Baltimore, Md. : 1950) 20050615

• Suppression of multidrug-resistant HIV-1 reverse transcriptase primer unblocking activity by alpha-phosphate-modified thymidine analogues.

  Journal of molecular biology 20050610

• Two routes to vesicle formation: metal-ligand complexation and ionic interactions.

  The journal of physical chemistry. B 20050609

• Absolute electronic excitation cross sections for low-energy electron (5-12 eV) scattering from condensed thymine.

  The Journal of chemical physics 20050608

• Abnormalities in uridine homeostatic regulation and pyrimidine nucleotide metabolism as a consequence of the deletion of the uridine phosphorylase gene.

  The Journal of biological chemistry 20050603

• Interfacial molecular recognition of dissolved thymine by medium chain dialkyl melamine-type monolayers.

  The journal of physical chemistry. B 20050602

• DNA interaction with naturally occurring antioxidant flavonoids quercetin, kaempferol, and delphinidin.

  Journal of biomolecular structure & dynamics 20050601

• Loss of ZMPSTE24 (FACE-1) causes autosomal recessive restrictive dermopathy and accumulation of Lamin A precursors.

  Human molecular genetics 20050601

• Simultaneous determination of thymidylate and thymidine diphosphate by capillary electrophoresis as a rapid monitoring tool for thymidine kinase and thymidylate kinase activities.

  Electrophoresis 20050601

• The CovR response regulator of group A streptococcus (GAS) acts directly to repress its own promoter.

  Molecular microbiology 20050601

• Genetic features, clinical phenotypes, and prevalence of sensorineural hearing loss associated with the 961delT mitochondrial mutation.

  Auris, nasus, larynx 20050601

• Capillary electrophoresis-laser induced fluorescence analysis of endogenous damage in mitochondrial and genomic DNA.

  Electrophoresis 20050601

• Congenital methemoglobinemia caused by Hb-MRatnagiri (beta-63CAT-->TAT, His-->Tyr) in an Indian family.

  American journal of hematology 20050601

• A novel polypyrimidine antitumor agent FdUMP[10] induces thymineless death with topoisomerase I-DNA complexes.

  Cancer research 20050601

• Molecular scanning of the betacellulin gene for mutations in type 2 diabetic patients.

  Diabetes research and clinical practice 20050601

• A Comparative study of Fe(II) and Fe(III) interactions with DNA duplex: major and minor grooves bindings.

  DNA and cell biology 20050601

• Comparative analysis of the exopolysaccharide biosynthesis gene clusters from four strains of Lactobacillus rhamnosus.

  Microbiology (Reading, England) 20050601

• Mg2+-modulated KMnO4 reactivity of thymines in the open transcription complex reflects variation in the negative electrostatic potential along the separated DNA strands. Footprinting of Escherichia coli RNA polymerase complex at the lambdaP(R) promoter revisited.

  The FEBS journal 20050601

• Susceptibility to superhelically driven DNA duplex destabilization: a highly conserved property of yeast replication origins.

  PLoS computational biology 20050601

• Uranyl photoprobing of nonbent A/T- and bent A-tracts. A difference of flexibility?

  Biochemistry 20050531

• Recognition of CG inversions in DNA triple helices by methylated 3H-pyrrolo[2,3-d]pyrimidin-2(7H)-one nucleoside analogues.

  Chemical communications (Cambridge, England) 20050528

• Stereo-differentiation in the excited state behaviour of naphthalene-thymine dyads.

  Chemical communications (Cambridge, England) 20050528

• Effects of sequence and structure in the separation of nucleic acids using ion pair reverse phase liquid chromatography.

  Journal of chromatography. A 20050527

• Convenient synthesis of nucleoside and isonucleoside analogues.

  Organic letters 20050526

• Genes of the thymidine salvage pathway: thymine-7-hydroxylase from a Rhodotorula glutinis cDNA library and iso-orotate decarboxylase from Neurospora crassa.

  Biochimica et biophysica acta 20050525

• Structure of B-DNA with cations tethered in the major groove.

  Biochemistry 20050524

• Analysis of the 2.0 A crystal structure of the protein-DNA complex of the human PDEF Ets domain bound to the prostate specific antigen regulatory site.

  Biochemistry 20050517

• Inhibition of thymidine phosphorylase (PD-ECGF) from SD-lymphoma by phosphonomethoxyalkyl thymines.

  Biochemical pharmacology 20050515

• Analysis of the 5q31-q33 locus shows an association between IL13-1055C/T IL-13-591A/G polymorphisms and Schistosoma haematobium infections.

  Journal of immunology (Baltimore, Md. : 1950) 20050515

• Correlated ab initio study of nucleic acid bases and their tautomers in the gas phase, in a microhydrated environment and in aqueous solution. Part 4. Uracil and thymine.

  Physical chemistry chemical physics : PCCP 20050507

• Adiabatic electron affinities of the polyhydrated adenine-thymine base pair: a density functional study.

  The journal of physical chemistry. A 20050505

• AT base pair anions versus (9-methyl-A)(1-methyl-T) base pair anions.

  Journal of the American Chemical Society 20050504

• Multiple enzyme activities of Escherichia coli MutT protein for sanitization of DNA and RNA precursor pools.

  Biochemistry 20050503

• Zidampidine, an aryl phosphate derivative of AZT: in vivo pharmacokinetics, metabolism, toxicity, and anti-viral efficacy against hemorrhagic fever caused by Lassa virus.

  Bioorganic & medicinal chemistry 20050502

• A natural CYP2B6 TATA box polymorphism (-82T--> C) leading to enhanced transcription and relocation of the transcriptional start site.

  Molecular pharmacology 20050501

• Routine HLA-B genotyping with PCR-sequence-specific oligonucleotides detects a B*52 variant (B*5206).

  Tissue antigens 20050501

• Association between DNA variant sites in the apolipoprotein A5 gene and coronary heart disease in Chinese.

  Metabolism: clinical and experimental 20050501

• The VEGF +405 CC promoter polymorphism is associated with an impaired prognosis in patients with chronic heart failure: a MERIT-HF substudy.

  Journal of cardiac failure 20050501

• [In vitro antitumor effect of adenovirus containing CD-TK fusion gene driven by VEGF promoter on LoVo cells].

  Di 1 jun yi da xue xue bao = Academic journal of the first medical college of PLA 20050501

• A patient with Rothmund-Thomson syndrome and all features of RAPADILINO.

  Archives of dermatology 20050501

• Diffuse nonepidermolytic palmoplantar keratoderma caused by a recurrent nonsense mutation in DSG1.

  Archives of dermatology 20050501

• Validated specific HPLC method for determination of zidovudine during stability studies.

  Journal of pharmaceutical and biomedical analysis 20050429

• Establishment of inherent stability of stavudine and development of a validated stability-indicating HPLC assay method.

  Journal of pharmaceutical and biomedical analysis 20050429

• Electronic structure of the nucleobases.

  The journal of physical chemistry. B 20050428

• Time-resolved study of thymine dimer formation.

  Journal of the American Chemical Society 20050427

• Investigation of systemic folate status, impact of alcohol intake and levels of DNA damage in mononuclear cells of breast cancer patients.

  British journal of cancer 20050425

• Substrate specificity, localization, and essential role of the glutathione peroxidase-type tryparedoxin peroxidases in Trypanosoma brucei.

  The Journal of biological chemistry 20050415

• Fluorinated olefinic peptide nucleic acid: synthesis and pairing properties with complementary DNA.

  The Journal of organic chemistry 20050415

• The extent of ossification of posterior longitudinal ligament of the spine associated with nucleotide pyrophosphatase gene and leptin receptor gene polymorphisms.

  Spine 20050415

• SUMO modification: wrestling with protein conformation.

  Current biology : CB 20050412

• Functionality of human thymine DNA glycosylase requires SUMO-regulated changes in protein conformation.

  Current biology : CB 20050412

• [The plasma homocysteine, folic acid and vitamin B12 levels in young people with high risk for cardiovascular disease and its relation to metylentetrahydrofolate reductase (MTHFR) gene polymorphism].

  Orvosi hetilap 20050403

• Nucleotide specificity of HIV-1 reverse transcriptases with amino acid substitutions affecting Ala-114.

  The Biochemical journal 20050401

• Effectiveness of vasopressin V2 receptor antagonists OPC-31260 and OPC-41061 on polycystic kidney disease development in the PCK rat.

  Journal of the American Society of Nephrology : JASN 20050401

• Functional characterizations of novWUS involved in novobiocin biosynthesis from Streptomyces spheroides.

  Archives of biochemistry and biophysics 20050401

• Effect of the MDR1 C3435T variant and P-glycoprotein induction on dicloxacillin pharmacokinetics.

  Journal of clinical pharmacology 20050401

• A novel missense mutation in the Connexin 26 gene associated with autosomal recessive sensorineural deafness.

  Hearing research 20050401

• Association of sporadic chondrocalcinosis with a -4-basepair G-to-A transition in the 5'-untranslated region of ANKH that promotes enhanced expression of ANKH protein and excess generation of extracellular inorganic pyrophosphate.

  Arthritis and rheumatism 20050401

• Light-induced reactions of Escherichia coli DNA photolyase monitored by Fourier transform infrared spectroscopy.

  The FEBS journal 20050401

• [Biological consequences and base excision repair mechanisms of oxidative base damage in DNA].

  Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 20050401

• Association of C825T polymorphism of G protein beta3 subunit with the autonomic nervous system in young healthy Japanese individuals.

  American journal of hypertension 20050401

• Promoter methylation of E-cadherin in hepatocellular carcinomas and dysplastic nodules.

  Journal of Korean medical science 20050401

• A point mutation in the iron-responsive element of the L-ferritin in a family with hereditary hyperferritinemia cataract syndrome.

  Canadian journal of gastroenterology = Journal canadien de gastroenterologie 20050401

• Identification of three novel mutations in the dihydropyrimidine dehydrogenase gene associated with altered pre-mRNA splicing or protein function.

  Biological chemistry 20050401

• Characterization of three essential residues in the conserved ATP-binding region of Epstein-Barr virus thymidine kinase.

  Biochemistry 20050329

• Evidence for Watson-Crick and not Hoogsteen or wobble base pairing in the selection of nucleotides for insertion opposite pyrimidines and a thymine dimer by yeast DNA pol eta.

  Biochemistry 20050329

• Characterization of a wide range base-damage-endonuclease activity of mammalian rpS3.

  Biochemical and biophysical research communications 20050325

• Efficient DNA interstrand cross-link formation from a nucleotide radical.

  Journal of the American Chemical Society 20050323

• Synthesis and evaluation of mimetics of UDP and UDP-alpha-D-galactose, dTDP and dTDP-alpha-D-glucose with monosaccharides replacing the key pyrophosphate unit.

  Organic & biomolecular chemistry 20050321

• A Thai family with hereditary pancreatitis and increased cancer risk due to a mutation in PRSS1 gene.

  World journal of gastroenterology 20050321

• Adjustment of the gamma dihedral angle of an oligonucleotide P3'-->N5' phosphoramidate enhances its binding affinity towards complementary strands.

  Angewandte Chemie (International ed. in English) 20050318

• A series of nonpolar thymidine analogues of increasing size: DNA base pairing and stacking properties.

  The Journal of organic chemistry 20050318

• A TDDFT study of the optical response of DNA bases, base pairs, and their tautomers in the gas phase.

  The journal of physical chemistry. A 20050317

• Potential pitfalls of radiolabel adsorption to ceramic biomaterials.

  Journal of biomedical materials research. Part A 20050315

• 5-Alkyl-2-alkylamino-6-(2,6-difluorophenylalkyl)-3,4-dihydropyrimidin-4(3H)-ones, a new series of potent, broad-spectrum non-nucleoside reverse transcriptase inhibitors belonging to the DABO family.

  Bioorganic & medicinal chemistry 20050315

• Experimental demonstration of T:(G:G:G:G):T hexad and T:A:A:T tetrad alignments within a DNA quadruplex stem.

  Biochemistry 20050315

• Base selectivity is impaired by mutants that perturb hydrogen bonding networks in the RB69 DNA polymerase active site.

  Biochemistry 20050308

• Inhibition of phosphorolysis catalyzed by HIV-1 reverse transcriptase is responsible for the synergy found in combinations of 3'-azido-3'-deoxythymidine with nonnucleoside inhibitors.

  Biochemistry 20050308

• Ab initio electronic structure of thymine anions.

  Physical chemistry chemical physics : PCCP 20050307

• Bond-selective H- ion abstraction from thymine.

  Angewandte Chemie (International ed. in English) 20050304

• Self-assembly of bidentate ligands for combinatorial homogeneous catalysis based on an A-T base-pair model.

  Angewandte Chemie (International ed. in English) 20050304

• Interaction of sodium and potassium ions with sandwiched cytosine-, guanine-, thymine-, and uracil-base tetrads.

  Journal of computational chemistry 20050301

• Th1-type immune response to a Coccidioides immitis antigen delivered by an attenuated strain of the non-invasive enteropathogen Vibrio cholerae.

  FEMS immunology and medical microbiology 20050301

• Comparative study of the photophysical properties of indoprofen photoproducts in relation with their DNA photosensitizing properties.

  Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 20050301

• Historical article: Titration studies and the structure of DNA.

  Trends in biochemical sciences 20050301

• Carnitine palmitoyltransferase II deficiency due to a novel gene variant in a patient with rhabdomyolysis and ARF.

  American journal of kidney diseases : the official journal of the National Kidney Foundation 20050301

• Chromosome cohesion: a cycle of holding together and falling apart.

  PLoS biology 20050301

• Determination of 5-methyl-cytosine and cytosine in tumor DNA of cancer patients.

  Electrophoresis 20050301

• Cloning of novel LERGU mRNAs in GPR30 3' untranslated region and detection of 2 bp-deletion polymorphism in gastric cancer.

  Cancer science 20050301

• Are effects of MTHFR (C677T) genotype on BMD confined to women with low folate and riboflavin intake? Analysis of food records from the Danish osteoporosis prevention study.

  Bone 20050301

• Identification of the first pyrimidine nucleobase transporter in Leishmania: similarities with the Trypanosoma brucei U1 transporter and antileishmanial activity of uracil analogues.

  Parasitology 20050301

• Study of the hydrogen bond in different orientations of adenine-thymine base pairs: an ab initio study.

  Biochemistry. Biokhimiia 20050301

• Characterization of two protein-binding sites in the second intron of the mouse K-ras gene.

  Experimental lung research 20050301

• Sequence-specific DNA damage by reactive oxygen species: Implications for carcinogenesis and aging.

  Environmental health and preventive medicine 20050301

• Structure of a type II thymidine kinase with bound dTTP.

  FEBS letters 20050227

• 3-[(2R)-Amino-2-phenylethyl]-1-(2,6-difluorobenzyl)-5-(2-fluoro-3-methoxyphenyl)- 6-methylpyrimidin-2,4-dione (NBI 42902) as a potent and orally active antagonist of the human gonadotropin-releasing hormone receptor. Design, synthesis, and in vitro and in vivo characterization.

  Journal of medicinal chemistry 20050224

• Solid-phase synthesis, characterization and DNA binding properties of the first chloro(polypyridyl)ruthenium conjugated peptide complex.

  Dalton transactions (Cambridge, England : 2003) 20050221

• The dynamic properties of an intramolecular transition from DNA duplex to cytosine-thymine motif triplex.

  Organic & biomolecular chemistry 20050221

• Noncovalent SUMO-1 binding activity of thymine DNA glycosylase (TDG) is required for its SUMO-1 modification and colocalization with the promyelocytic leukemia protein.

  The Journal of biological chemistry 20050218

• Stabilization energies of the hydrogen-bonded and stacked structures of nucleic acid base pairs in the crystal geometries of CG, AT, and AC DNA steps and in the NMR geometry of the 5'-d(GCGAAGC)-3' hairpin: Complete basis set calculations at the MP2 and CCSD(T) levels.

  The journal of physical chemistry. A 20050217

• Dynamics of photoinduced processes in adenine and thymine base pairs.

  Journal of the American Chemical Society 20050216

• Absence of V599E BRAF mutations in desmoplastic melanomas.

  Cancer 20050215

• CD14 C(-260)T promoter polymorphism and prevalence of acute coronary syndromes.

  International journal of cardiology 20050215

• Solution structure of the biologically relevant G-quadruplex element in the human c-MYC promoter. Implications for G-quadruplex stabilization.

  Biochemistry 20050215

• Dissecting the effects of DNA polymerase and ribonuclease H inhibitor combinations on HIV-1 reverse-transcriptase activities.

  Biochemistry 20050208

• Using fluorescence resonance energy transfer to measure distances along individual DNA molecules: corrections due to nonideal transfer.

  The Journal of chemical physics 20050208

• A new [2 + 2] photodimerization of 5-chloro- and 5-methyl-2-pyridone in their inclusion complexes with 1,1'-biphenyl-2,2'-dicarboxylic acid as a model for DNA damage by photodimerization of its thymine component.

  Chemical communications (Cambridge, England) 20050207

• Regulation of trypanosome DNA glycosylation by a SWI2/SNF2-like protein.

  Molecular cell 20050204

• The t-PA -7351C>T enhancer polymorphism decreases Sp1 and Sp3 protein binding affinity and transcriptional responsiveness to retinoic acid.

  Blood 20050201

• Expression of deoxynucleotide carrier is not associated with the mitochondrial DNA depletion caused by anti-HIV dideoxynucleoside analogs and mitochondrial dNTP uptake.

  Molecular pharmacology 20050201

• Parallel DNA double helices incorporating isoG or m5isoC bases studied by FTIR, CD and molecular modeling.

  Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy 20050201

• Mechanism of early biphasic activation of poly(ADP-ribose) polymerase-1 in response to ultraviolet B radiation.

  Journal of cell science 20050201

• Evidence for three thymine DNA glycosylases in human cell extracts: substrate specificities of thymine DNA glycosylase activities.

  Medical science monitor : international medical journal of experimental and clinical research 20050201

• Ultraviolet B-induced DNA damage in human epidermis is modified by the antioxidants ascorbic acid and D-alpha-tocopherol.

  The Journal of investigative dermatology 20050201

• Somatic hypermutation at A.T pairs: polymerase error versus dUTP incorporation.

  Nature reviews. Immunology 20050201

• Association of defensin beta-1 gene polymorphisms with asthma.

  The Journal of allergy and clinical immunology 20050201

• Loss of reduced folate carrier function and folate depletion result in enhanced pemetrexed inhibition of purine synthesis.

  Clinical cancer research : an official journal of the American Association for Cancer Research 20050201

• Repair of oxidative damage of thymine by HeLa whole-cell extracts: simultaneous analysis using a microsupport and comparison with traditional PAGE analysis.

  Biochimie 20050201

• Nucleotide correlations and electronic transport of DNA sequences.

  Physical review. E, Statistical, nonlinear, and soft matter physics 20050201

• Effect of the peroxisome proliferator-activated receptor-gamma C161T polymorphism on lipid profile in Brazilian patients with Type 2 diabetes mellitus.

  Journal of endocrinological investigation 20050201

• Are genes destiny? Have adenine, cytosine, guanine and thymine replaced Lachesis, Clotho and Atropos as the weavers of our fate?

  World psychiatry : official journal of the World Psychiatric Association (WPA) 20050201

• Lack of EGF receptor contributes to drug sensitivity of human germline cells.

  British journal of cancer 20050131

• Direct observation of the participation of flavin in product formation by thyX-encoded thymidylate synthase.

  Journal of the American Chemical Society 20050126

• Topochemical model for prediction of anti-HIV activity of HEPT analogs.

  Bioorganic & medicinal chemistry letters 20050117

• Deletion analysis in the catalytic region of the 10-23 DNA enzyme.

  FEBS letters 20050117

• 2,6-diaminopyridine derivatives as models of molecular sensor for nucleic acid base detection: ab initio calculations of electronic effects induced by hydrogen bonds formation.

  Biosensors & bioelectronics 20050115

• Adhesion of different cell cycle human hepatoma cells to endothelial cells and roles of integrin beta1.

  World journal of gastroenterology 20050114

• Charge loss in gas-phase multiply negatively charged oligonucleotides.

  The journal of physical chemistry. A 20050113

• The N6-methyl group of adenine further increases the BI stability of DNA compared to C5-methyl groups.

  The journal of physical chemistry. B 20050113

• The crystal structure of Mycobacterium tuberculosis thymidylate kinase in complex with 3'-azidodeoxythymidine monophosphate suggests a mechanism for competitive inhibition.

  Biochemistry 20050111

• Novel benzopyrimidines as widened analogues of DNA bases.

  The Journal of organic chemistry 20050107

• DNA glycosylase activities for thymine residues oxidized in the methyl group are functions of the hNEIL1 and hNTH1 enzymes in human cells.

  DNA repair 20050102

• Polymorphisms of the interleukin-1beta gene affect the risk of myocardial infarction and ischemic stroke at young age and the response of mononuclear cells to stimulation in vitro.

  Arteriosclerosis, thrombosis, and vascular biology 20050101

• Molecular beacon probes of photodamage in thymine and uracil oligonucleotides.

  Photochemistry and photobiology 20050101

• A single nucleotide polymorphism in the MMP-9 promoter affects tumor progression and invasive phenotype of gastric cancer.

  Journal of cancer research and clinical oncology 20050101

• Surface plasmon resonance spectroscopy and quartz crystal microbalance study of MutS binding with single thymine-guanine mismatched DNA.

  Frontiers in bioscience : a journal and virtual library 20050101

• Polymorphisms in the bovine leptin promoter associated with serum leptin concentration, growth, feed intake, feeding behavior, and measures of carcass merit.

  Journal of animal science 20050101

• Genetic variants of ApoE account for variability of plasma low-density lipoprotein and apolipoprotein B levels in FHBL.

  Atherosclerosis 20050101

• Relation of polymorphism within the C-reactive protein gene and plasma CRP levels.

  Atherosclerosis 20050101

• Role of DNA sequence in the binding specificity of synthetic basic-helix-loop-helix domains.

  Chembiochem : a European journal of chemical biology 20050101

• MTHFR C677T gene mutation as a risk factor for arterial stroke: a hospital based study.

  European journal of neurology 20050101

• [Studies on the structure-activity relationship of allyl substituted oxopyrimidines searching for the novel antagonist or agonist of barbiturates to the sleep mechanism based on the uridine receptor theory--barbituric acid to uridine (part I)].

  Yakugaku zasshi : Journal of the Pharmaceutical Society of Japan 20050101

• Optimisation of growth conditions for continuous culture of the hyperthermophilic archaeon Thermococcus hydrothermalis and development of sulphur-free defined and minimal media.

  Research in microbiology 20050101

• Critical examination of the supermolecule density functional theory calculations of intermolecular interactions.

  The Journal of chemical physics 20050101

• Association of a functional single-nucleotide polymorphism of PTPN22, encoding lymphoid protein phosphatase, with rheumatoid arthritis and systemic lupus erythematosus.

  Arthritis and rheumatism 20050101

• Nucleobases as supramolecular motifs.

  Chemical Society reviews 20050101

• Raman spectroscopic analysis of the effect of ultraviolet irradiation on calf thymus DNA.

  Acta biochimica et biophysica Sinica 20050101

• Charge state-dependent fragmentation of oligonucleotide/metal complexes.

  Journal of the American Society for Mass Spectrometry 20050101

• Sorghum genome sequencing by methylation filtration.

  PLoS biology 20050101

• Identification of a novel calcium-sensing receptor gene mutation causing familial hypocalciuric hypercalcemia by single-strand conformation polymorphism analysis.

  Experimental and clinical endocrinology & diabetes : official journal, German Society of Endocrinology [and] German Diabetes Association 20050101

• The loss of NKX3.1 expression in testicular--and prostate--cancers is not caused by promoter hypermethylation.

  Molecular cancer 20050101

• Accelerated evolution associated with genome reduction in a free-living prokaryote.

  Genome biology 20050101

• DNA-binding fluorochromes: correlation between C-banding of mouse metaphase chromosomes and hydrogen bonding to adenine-thymine base pairs.

  Acta histochemica 20050101

• Calpha-H...O = C hydrogen bonds contribute to the specificity of RGD cell-adhesion interactions.

  BMC structural biology 20050101

• Low density DNA microarray for detection of most frequent TP53 missense point mutations.

  BMC biotechnology 20050101

• The discovery of the first human retrovirus: HTLV-1 and HTLV-2.

  Retrovirology 20050101

• Spectral properties of topical retinoids prevent DNA damage and apoptosis after acute UV-B exposure in hairless mice.

  Photochemistry and photobiology 20050101

• Transcriptional slippage in bacteria: distribution in sequenced genomes and utilization in IS element gene expression.

  Genome biology 20050101

• Protein encoding genes in an ancient plant: analysis of codon usage, retained genes and splice sites in a moss, Physcomitrella patens.

  BMC genomics 20050101

• Polymorphism screening and haplotype analysis of the tryptophan hydroxylase gene (TPH1) and association with bipolar affective disorder in Taiwan.

  BMC medical genetics 20050101

• Synthesis of (+/-)-4'-ethynyl and 4'-cyano carbocyclic analogues of stavudine (d4T).

  Nucleosides, nucleotides & nucleic acids 20050101

• Mismatch dependent uracil/thymine-DNA glycosylases excise exocyclic hydroxyethano and hydroxypropano cytosine adducts.

  Acta biochimica Polonica 20050101

• C. elegans serine-threonine kinase KIN-29 modulates TGFbeta signaling and regulates body size formation.

  BMC developmental biology 20050101

• A phase I study of hydralazine to demethylate and reactivate the expression of tumor suppressor genes.

  BMC cancer 20050101

• Synthesis of 5'-triphosphate mimics (P3Ms) of 3'-azido-3',5'-dideoxythymidine and 3',5'-dideoxy-5'-difluoromethylenethymidine as HIV-1 reverse transcriptase inhibitors.

  Nucleosides, nucleotides & nucleic acids 20050101

• Cytoskeleton reorganization mediates alpha6beta1 integrin-associated actions of laminin on proliferation and survival, but not on steroidogenesis of ovine granulosa cells.

  Reproductive biology and endocrinology : RB&E 20050101

• Cross-linking between thymine and indolyl radical: possible mechanisms for cross-linking of DNA and tryptophan-containing peptides.

  Bioconjugate chemistry 20050101

• Association of apolipoprotein J gene 866C-->T polymorphism with preeclampsia and essential hypertension.

  Gynecologic and obstetric investigation 20050101

• Biomarker metabolites capturing the metabolite variance present in a rice plant developmental period.

  BMC plant biology 20050101

• A method for quantitating the intracellular metabolism of AZT amino acid phosphoramidate pronucleotides by capillary high-performance liquid chromatography-electrospray ionization mass spectrometry.

  Molecular pharmaceutics 20050101

• Preponderance of the oncogenic V599E and V599K mutations in B-raf kinase domain is enhanced in melanoma cutaneous/subcutaneous metastases.

  BMC cancer 20050101

• Transforming growth factor-beta1 SNPs: genetic and phenotypic correlations in progressive kidney insufficiency.

  Nephron. Experimental nephrology 20050101

• Can radical cations of the constituents of nucleic acids be formed in the gas phase using ternary transition metal complexes?

  Rapid communications in mass spectrometry : RCM 20050101

• Electrospray ionization mass spectrometry of pyrimidine base-rubidium complexes.

  European journal of mass spectrometry (Chichester, England) 20050101

• Novel synthesis and characterization of bioconjugate block copolymers having oligonucleotides.

  Biomacromolecules 20050101

• SeqX: a tool to detect, analyze and visualize residue co-locations in protein and nucleic acid structures.

  BMC bioinformatics 20050101

• Control of DNA replication: regulation and activation of eukaryotic replicative helicase, MCM.

  IUBMB life 20050101

• HBx M130K and V131I (T-A) mutations in HBV genotype F during a follow-up study in chronic carriers.

  Virology journal 20050101

• [The study of coupling agents for the phosphorylation of 3'-azido-3'-deoxythymidine with (P32)orthophosphoric acid].

  Bioorganicheskaia khimiia 20050101

• Dihydropyrimidine dehydrogenase deficiency presenting at birth.

  Journal of inherited metabolic disease 20050101

• Identification of XLRS1 gene mutation (608C > T) in a Portuguese family with juvenile retinoschisis.

  European journal of ophthalmology 20050101

• Genometrics as an essential tool for the assembly of whole genome sequences: the example of the chromosome of Bifidobacterium longum NCC2705.

  BMC microbiology 20050101

• [The C677T polymorphism in the methylene tetrahydrofolate reductase gene among Tunisian population].

  Annales de biologie clinique 20050101

• The diagnosis and therapy of brain tumours.

  Folia neuropathologica 20050101

• Antiviral and cytostatic evaluation of the novel 6-acyclic chain substituted thymine derivatives.

  Antiviral chemistry & chemotherapy 20050101

• Synthesis of carbocyclic nucleotides as potential substrates for thymidylate kinase.

  Nucleosides, nucleotides & nucleic acids 20050101

• 'Lock-in' modified cyclosal nucleotides--the second generation of cyclosal prodrugs.

  Nucleosides, nucleotides & nucleic acids 20050101

• Synthesis of 5-(1-propynyl)-2'-deoxyuridine 5'-(alpha-P-borano)triphosphate and kinetic characterization as a substrate for mmlv reverse transcriptase.

  Nucleosides, nucleotides & nucleic acids 20050101

• Expansion of triplex recognition codes by the use of novel bicyclic nucleoside derivatives (WNA).

  Nucleosides, nucleotides & nucleic acids 20050101

• A rapid and versatile combined DNA/RNA extraction protocol and its application to the analysis of a novel DNA marker set polymorphic between Arabidopsis thaliana ecotypes Col-0 and Landsberg erecta.

  Plant methods 20050101

• Topical calcineurin inhibitors decrease the production of UVB-induced thymine dimers from hairless mouse epidermis.

  Dermatology (Basel, Switzerland) 20050101

• Expression, purification and characterization of methyl DNA binding protein from Bombyx mori.

  Journal of insect science (Online) 20050101

• Characterization of methylated and unmethlyated CpG-ODNs by electrospray ionization tandem mass spectrometry.

  European journal of mass spectrometry (Chichester, England) 20050101

• Cross-linked polymeric nanogel formulations of 5'-triphosphates of nucleoside analogues: role of the cellular membrane in drug release.

  Molecular pharmaceutics 20050101

• Metallothionien 3 expression is frequently down-regulated in oesophageal squamous cell carcinoma by DNA methylation.

  Molecular cancer 20050101

• [Photochemical revelation of the stacking aggregation of thymine chromophores in water solutions of polythymidylic acid].

  Biofizika 20050101

• Analysis of MMP-9 and TIMP-2 gene promoter polymorphisms in individuals with hypodontia.

  Brazilian dental journal 20050101

• Comprehensive analysis of pyrimidine metabolism in 450 children with unspecific neurological symptoms using high-pressure liquid chromatography-electrospray ionization tandem mass spectrometry.

  Journal of inherited metabolic disease 20050101

• Phosphoralaninate pronucleotides of pyrimidine methylenecyclopropane analogues of nucleosides: synthesis and antiviral activity.

  Nucleosides, nucleotides & nucleic acids 20050101

• Mitochondrial DNA variation among populations of the glassy-winged sharpshooter, Homalodisca coagulata.

  Journal of insect science (Online) 20050101

• DNA nanowire sensitive to the surrounding condition.

  Nucleic acids symposium series (2004) 20050101

• Synthesis of oligonucleotides containing 2'-fluorinated thymidine glycol as mechanism-based inhibitors of endonuclease III.

  Nucleic acids symposium series (2004) 20050101

• Spectroscopic analyses of DNA duplexes in the presence of mercury ions.

  Nucleic acids symposium series (2004) 20050101

• Computational evaluation of the specific interaction between cation and mismatch base pair.

  Nucleic acids symposium series (2004) 20050101

• Fluorescence detection of thymidine-related single-nucleotide polymorphisms by 3, 5-diaminopyrazine derivatives.

  Nucleic acids symposium series (2004) 20050101

• Investigation of ferrocenyl carbodiimide (FCDI) in the modification reaction of nucleic acids.

  Nucleic acids symposium series (2004) 20050101

• Synthesis of a newly peptide nucleic acid that contains tertiary amino groups.

  Nucleic acids symposium series (2004) 20050101

• Hydrogen bonds of RNA are stronger than those of DNA, but NMR monitors only presence of methyl substituent in uracil/thymine.

  Journal of the American Chemical Society 20041229

• Direct assessment of interresidue forces in Watson-Crick base pairs using theoretical compliance constants.

  Journal of the American Chemical Society 20041222

• Loop-length-dependent folding of G-quadruplexes.

  Journal of the American Chemical Society 20041222

• DNA damage and mutations produced by chloroacetaldehyde in a CpG-methylated target gene.

  Mutation research 20041221

• Mouse NEIL1 protein is specific for excision of 2,6-diamino-4-hydroxy-5-formamidopyrimidine and 4,6-diamino-5-formamidopyrimidine from oxidatively damaged DNA.

  Biochemistry 20041221

• Requirements for DNA unpairing during displacement synthesis by HIV-1 reverse transcriptase.

  The Journal of biological chemistry 20041217

• Structure and axis curvature in two dA6 x dT6 DNA oligonucleotides: comparison of molecular dynamics simulations with results from crystallography and NMR spectroscopy.

  Biopolymers 20041215

• Microarray-based method for detecting methylation changes of p16(Ink4a) gene 5'-CpG islands in gastric carcinomas.

  World journal of gastroenterology 20041215

• Recognition of an unnatural difluorophenyl nucleotide by uracil DNA glycosylase.

  Biochemistry 20041214

• Monitoring HSVtk suicide gene therapy: the role of [(18)F]FHPG membrane transport.

  British journal of cancer 20041213

• Activation-induced cytidine deaminase deaminates 5-methylcytosine in DNA and is expressed in pluripotent tissues: implications for epigenetic reprogramming.

  The Journal of biological chemistry 20041210

• Hybridization of oligonucleotide-modified silver and gold nanoparticles in aqueous dispersions and on gold films.

  Journal of the American Chemical Society 20041208

• Vibrational and electronic excitations of H(2)O on thymine films induced by low-energy electrons.

  The Journal of chemical physics 20041208

• Crystal structure of a photolyase bound to a CPD-like DNA lesion after in situ repair.

  Science (New York, N.Y.) 20041203

• Role of mismatch-specific uracil-DNA glycosylase in repair of 3,N4-ethenocytosine in vivo.

  DNA repair 20041202

• Inactivating mutations of the human base excision repair gene NEIL1 in gastric cancer.

  Carcinogenesis 20041201

• New elements of the termination of transcription in prokaryotes.

  Journal of biomolecular structure & dynamics 20041201

• Cardiovascular risk in type 2 diabetes is associated with variation at the PPARG locus: a Go-DARTS study.

  Arteriosclerosis, thrombosis, and vascular biology 20041201

• Investigation of the association between OPA1 polymorphisms and normal-tension glaucoma in Korea.

  Journal of glaucoma 20041201

• High-resolution structure of an extended A-tract: [d(CGCAAATTTGCG)]2.

  Journal of the American Chemical Society 20041201

• Genetic analysis of the thermolabile methylenetetrahydrofolate reductase variant in schizophrenia and mood disorders.

  Psychiatric genetics 20041201

• Genotype and allele frequencies of C3435T polymorphism of the MDR1 gene in various Jewish populations of Israel.

  Therapeutic drug monitoring 20041201

• Characterization of a temperature-sensitive DNA ligase from Escherichia coli.

  Microbiology (Reading, England) 20041201

• Methylenetetrahydrofolate reductase polymorphism (MTHFR C677T) and bone mineral density in Chinese men and women.

  Bone 20041201

• Association of peripheral and central arterial wave reflections with the CYP11B2 -344C allele and sodium excretion.

  Journal of hypertension 20041201

• Association analysis of the polymorphism T1128C in the signal peptide of neuropeptide Y in a Swedish hypertensive population.

  Journal of hypertension 20041201

• Role of base stacking and sequence context in the inhibition of yeast DNA polymerase eta by pyrene nucleotide.

  Biochemistry 20041123

• Functional allelic heterogeneity and pleiotropy of a repeat polymorphism in tyrosine hydroxylase: prediction of catecholamines and response to stress in twins.

  Physiological genomics 20041117

• Polymorphisms in the Fc epsilon RI beta promoter region affecting transcription activity: a possible promoter-dependent mechanism for association between Fc epsilon RI beta and atopy.

  Journal of immunology (Baltimore, Md. : 1950) 20041115

• Singlet excited-state interactions in naphthalene-thymine dyads.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20041112

• High-efficiency bypass of DNA damage by human DNA polymerase Q.

  The EMBO journal 20041110

• Synthesis and degradation of nucleobases and nucleic acids by formamide in the presence of montmorillonites.

  Chembiochem : a European journal of chemical biology 20041105

• Effects of adrenomedullin on aldosterone-induced cell proliferation in rat cardiac fibroblasts.

  Biochimica et biophysica acta 20041105

• Pre-steady-state kinetic studies of the fidelity of human DNA polymerase mu.

  Biochemistry 20041102

• BRAF mutations in anaplastic thyroid carcinoma: implications for tumor origin, diagnosis and treatment.

  Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 20041101

• Structure of an anti-DNA fab complexed with a non-DNA ligand provides insights into cross-reactivity and molecular mimicry.

  Proteins 20041101

• Common promoter C516T polymorphism in the ApoB gene is an independent predictor of carotid atherosclerotic disease in subjects presenting a broad range of plasma cholesterol levels.

  Arteriosclerosis, thrombosis, and vascular biology 20041101

• Structural mechanism of allosteric substrate specificity regulation in a ribonucleotide reductase.

  Nature structural & molecular biology 20041101

• Topographic changes in SARS coronavirus-infected cells at late stages of infection.

  Emerging infectious diseases 20041101

• Analogues of acyclic nucleosides derived from tris-(hydroxymethyl)phosphine oxide or bis-(hydroxymethyl)phosphinic acid coupled to DNA nucleobases.

  Antiviral chemistry & chemotherapy 20041101

• Mutations in a novel gene, encoding a single transmembrane domain protein are associated with familial glucocorticoid deficiency type 2.

  Endocrine research 20041101

• A rapid and simple detection method for the BRAF(T1796A) mutation in fine-needle aspirated thyroid carcinoma cells.

  Thyroid : official journal of the American Thyroid Association 20041101

• [Raman spectroscopic study on the influence of ultraviolet radiation on calf thymus DNA in aqueous solution].

  Guang pu xue yu guang pu fen xi = Guang pu 20041101

• Thiophene-based diamidine forms a 'super' at binding minor groove agent.

  Journal of the American Chemical Society 20041027

• UPS1 and UPS2 from Arabidopsis mediate high affinity transport of uracil and 5-fluorouracil.

  The Journal of biological chemistry 20041022

• Isothermal titration calorimetry studies on the binding of DNA bases and PNA base monomers to gold nanoparticles.

  Journal of the American Chemical Society 20041020

• Independent generation of the 5-hydroxy-5,6-dihydrothymidin-6-yl radical and its reactivity in dinucleoside monophosphates.

  Journal of the American Chemical Society 20041020

• The strong efficiency of the Escherichia coli gapA P1 promoter depends on a complex combination of functional determinants.

  The Biochemical journal 20041015

• The role of the reaction force to characterize local specific interactions that activate the intramolecular proton transfers in DNA basis.

  The Journal of chemical physics 20041015

• Genotoxicity of acrylamide in human lymphocytes.

  Chemico-biological interactions 20041015

• Characterization of nonspecific protein-DNA interactions by 1H paramagnetic relaxation enhancement.

  Journal of the American Chemical Society 20041013

• Use of chelating ligands to tune the reactive site of half-sandwich ruthenium(II)-arene anticancer complexes.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20041011

• An analogue of adenine that forms an 'A:T' base pair of comparable stability to G:C.

  Chemical communications (Cambridge, England) 20041007

• Chloroethylnitrosourea-derived ethano cytosine and adenine adducts are substrates for Escherichia coli glycosylases excising analogous etheno adducts.

  DNA repair 20041005

• Titration of poly(dA-dT) . poly(dA-dT) in solution at variable NaCl concentration.

  Biopolymers 20041005

• Accommodation of mispair aligned N3T-ethyl-N3T DNA interstrand cross link.

  Biochemistry 20041005

• Different methods to determine length heteroplasmy within the mitochondrial control region.

  International journal of legal medicine 20041001

• C-reactive protein genotypes affect baseline, but not exercise training-induced changes, in C-reactive protein levels.

  Arteriosclerosis, thrombosis, and vascular biology 20041001

• Synthesis and evaluation of thymine-derived carboxamides against mitochondrial thymidine kinase (TK-2) and related enzymes.

  Bioorganic & medicinal chemistry 20041001

• Two medium-chain acyl-coenzyme A synthetase genes, SAH and MACS1, are associated with plasma high-density lipoprotein cholesterol levels, but they are not associated with essential hypertension.

  Journal of hypertension 20041001

• Effects of adrenomedullin on cell proliferation in rat adventitia induced by aldosterone.

  Journal of hypertension 20041001

• Genetic response to climatic change: insights from ancient DNA and phylochronology.

  PLoS biology 20041001

• The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis.

  PLoS biology 20041001

• Simultaneous quantitation of zidovudine and zidovudine monophosphate from plasma, amniotic fluid and tissues by micellar capillary electrophoresis.

  Biomedical chromatography : BMC 20041001

• Association of pre-eclampsia with hyperhomocysteinaemia and methylenetetrahydrofolate reductase gene C677T polymorphism in a Turkish population.

  The Australian & New Zealand journal of obstetrics & gynaecology 20041001

• Evidence for association between endothelial nitric oxide synthase gene polymorphism (G894T) and inflammatory markers: the ATTICA study.

  American heart journal 20041001

• The midcell replication factory in Bacillus subtilis is highly mobile: implications for coordinating chromosome replication with other cell cycle events.

  Molecular microbiology 20041001

• Endothelial nitric oxide synthase and methylenetetrahydrofolate reductase gene polymorphisms are associated with endothelial dysfunction in young, healthy men.

  The Canadian journal of cardiology 20041001

• Absence of association between transforming growth factor-beta1 promoter polymorphisms and hypodontia.

  The Angle orthodontist 20041001

• Effects of zidovudine, stavudine and beta-aminoisobutyric acid on lipid homeostasis in mice: possible role in human fat wasting.

  Antiviral therapy 20041001

• Upregulation of platelet derived endothelial cell growth factor/thymidine phosphorylase by interferon alpha.

  Nucleosides, nucleotides & nucleic acids 20041001

• Role of platelet derived endothelial cell growth factor/thymidine phosphorylase in fluoropyrimidine sensitivity and potential role of deoxyribose-1-phosphate.

  Nucleosides, nucleotides & nucleic acids 20041001

• Detecting gradients of asymmetry in site-specific substitutions in mitochondrial genomes.

  DNA and cell biology 20041001

• Expanded-size bases in naturally sized DNA: evaluation of steric effects in Watson-Crick pairing.

  Journal of the American Chemical Society 20040929

• Demethylation of 3-methylthymine in DNA by bacterial and human DNA dioxygenases.

  The Journal of biological chemistry 20040924

• Crystal structure of an IdeR-DNA complex reveals a conformational change in activated IdeR for base-specific interactions.

  Journal of molecular biology 20040924

• Hydrogen-bonding-induced shifts of the excitation energies in nucleic acid bases: an interplay between electrostatic and electron density overlap effects.

  Journal of the American Chemical Society 20040922

• A single amino acid change in the first zinc finger of the DNA binding domain of the glucocorticoid receptor regulates differential promoter selectivity.

  The Journal of biological chemistry 20040917

• Sodium chloride-induced self-assembly of microfibers from nanofiber components.

  Journal of colloid and interface science 20040915

• Oxanine DNA glycosylase activity from Mammalian alkyladenine glycosylase.

  The Journal of biological chemistry 20040910

• Sensitive nonradiometric method for determining thymidine kinase 1 activity.

  Clinical chemistry 20040901

• Regulation in S phase by E2F.

  Cell cycle (Georgetown, Tex.) 20040901

• Cross sections of electron inelastic interactions in DNA.

  Radiation and environmental biophysics 20040901

• [Effects of genistein on cell proliferation and differentiation in human osteoblast].

  Wei sheng yan jiu = Journal of hygiene research 20040901

• Two modes of HIV-1 polypurine tract cleavage are affected by introducing locked nucleic acid analogs into the (-) DNA template.

  The Journal of biological chemistry 20040827

• Simple method for determining nucleobase pK(a) values by indirect labeling and demonstration of a pK(a) of neutrality in dsDNA.

  Journal of the American Chemical Society 20040825

• Double-proton transfer in adenine-thymine and guanine-cytosine base pairs. A post-Hartree-Fock ab initio study.

  Journal of the American Chemical Society 20040818

• Base-discriminating fluorescent (BDF) nucleoside: distinction of thymine by fluorescence quenching.

  Chemical communications (Cambridge, England) 20040807

• Increased dNTP binding affinity reveals a nonprocessive role for Escherichia coli beta clamp with DNA polymerase IV.

  The Journal of biological chemistry 20040806

• A novel method for the synthesis of dinucleoside boranophosphates by a boranophosphotriester method.

  The Journal of organic chemistry 20040806

• Preliminary characterization of light harvesting in E. coli DNA photolyase.

  Chembiochem : a European journal of chemical biology 20040806

• Adsorption of oligonucleotides on PMMA/PNIPAM core-shell latexes: polarity of the PNIPAM shell probed by fluorescence.

  Langmuir : the ACS journal of surfaces and colloids 20040803

• Silibinin prevents ultraviolet radiation-caused skin damages in SKH-1 hairless mice via a decrease in thymine dimer positive cells and an up-regulation of p53-p21/Cip1 in epidermis.

  Carcinogenesis 20040801

• Cellular repair of oxidatively induced DNA base lesions is defective in prostate cancer cell lines, PC-3 and DU-145.

  Carcinogenesis 20040801

• The fidelity of replication of the three-base-pair set adenine/thymine, hypoxanthine/cytosine and 6-thiopurine/5-methyl-2-pyrimidinone with T7 DNA polymerase.

  The Biochemical journal 20040801

• Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.

  Nature structural & molecular biology 20040801

• Low temperature Fourier transform infrared spectra and hydrogen bonding in polycrystalline uracil and thymine.

  Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy 20040801

• Studies on the synthesis and characterization of four trans-planaramineplatinum(II) complexes of the form trans-PtL(NH3)CL2 where L = 2-hydroxypyridine, 3-hydroxypyridine, imidazole, and imidazo(1,2-alpha)pyridine.

  European journal of medicinal chemistry 20040801

• The role of active arsenic species produced by metabolic reduction of dimethylarsinic acid in genotoxicity and tumorigenesis.

  Toxicology and applied pharmacology 20040801

• The -514 C->T hepatic lipase promoter region polymorphism and plasma lipids: a meta-analysis.

  The Journal of clinical endocrinology and metabolism 20040801

• X-linked sex-determining region Y box 3 (SOX3) gene mutations are uncommon in men with idiopathic oligoazoospermic infertility.

  The Journal of clinical endocrinology and metabolism 20040801

• Identification and functional analysis of dTDP-glucose-4,6-dehydratase gene and its linked gene cluster in an aminoglycoside antibiotics producer of Streptomyces tenebrarius H6.

  Current microbiology 20040801

• Intracellular metabolism and pharmacokinetics of 5'-hydrogenphosphonate of 3'-azido-2',3'-dideoxythymidine, a prodrug of 3'-azido-2',3'-dideoxythymidine.

  Antiviral research 20040801

• A focused and efficient genetic screening strategy in the mouse: identification of mutations that disrupt cortical development.

  PLoS biology 20040801

• Biochemical characterization of TT1383 from Thermus thermophilus identifies a novel dNTP triphosphohydrolase activity stimulated by dATP and dTTP.

  Journal of biochemistry 20040801

• A trojan horse approach for silencing thymidylate synthase.

  Biochemistry 20040720

• The HPV16 E6/E7 oncogene sensitizes human ovarian surface epithelial cells to low-dose but not high-dose 5-FU and 5-FUdR.

  Biochemical and biophysical research communications 20040716

• Replication by human DNA polymerase-iota occurs by Hoogsteen base-pairing.

  Nature 20040715

• Nonlinear breathing modes due to a defect in a DNA chain.

  Philosophical transactions. Series A, Mathematical, physical, and engineering sciences 20040715

• Gamma-radiolysis DNA products: synthesis of 6-(alpha-thyminyl)-5,6-dihydro-4-thiothymine derivatives.

  The Journal of organic chemistry 20040709

• Genotoxicity of acrylamide and glycidamide.

  Journal of the National Cancer Institute 20040707

• Adsorption/desorption of mono- and diblock copolymers on surfaces using specific hydrogen bonding interactions.

  Langmuir : the ACS journal of surfaces and colloids 20040706

• 2-Ureidoquinoline: a useful molecular element for stabilizing single cytosine and thymine bulges.

  Bioorganic & medicinal chemistry letters 20040705

• Methylation in the core-promoter region of the chondromodulin-I gene determines the cell-specific expression by regulating the binding of transcriptional activator Sp3.

  The Journal of biological chemistry 20040702

• Investigation of the GSalpha gene in the diagnosis of fibrous dysplasia.

  International journal of oral and maxillofacial surgery 20040701

• Lack of major involvement of human uroplakin genes in vesicoureteral reflux: implications for disease heterogeneity.

  Kidney international 20040701

• G protein beta3 subunit C825T polymorphism in primary IgA nephropathy.

  Kidney international 20040701

• Alpha1-adrenoceptor subtype substitution in knockout mice.

  British journal of pharmacology 20040701

• Hepatocytes from alpha1B-adrenoceptor knockout mice reveal compensatory adrenoceptor subtype substitution.

  British journal of pharmacology 20040701

• Identification of a new nonsense mutation (Tyr129Stop) of the SRY gene in a newborn infant with XY sex-reversal.

  American journal of medical genetics. Part A 20040701

• Polymorphisms in TDG and MGMT genes - epidemiological and functional study in lung cancer patients from Poland.

  Annals of human genetics 20040701

• Variation in dinucleotide (GT) repeat sequence in the first exon of the STAT6 gene is associated with atopic asthma and differentially regulates the promoter activity in vitro.

  Journal of medical genetics 20040701

• Association of the connexin36 gene with juvenile myoclonic epilepsy.

  Journal of medical genetics 20040701

• Editorial: Toward understanding variation in responsiveness to hormones.

  The Journal of clinical endocrinology and metabolism 20040701

• Vibrational spectra of 1-methylthymine: matrix isolation, solid state and theoretical studies.

  Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy 20040701

• Photosensitization of thymine nucleobase by benzophenone derivatives as models for photoinduced DNA damage: Paterno-Büchi vs energy and electron transfer processes.

  Chemical research in toxicology 20040701

• Electronic structures of A- and B-type DNA crystals.

  Physical review. E, Statistical, nonlinear, and soft matter physics 20040701

• Optical detection of thymine dinucleoside monophosphate and its cis-syn photodimer by inorganic nanoparticles.

  Journal of fluorescence 20040701

• Mechanistic explanation to the variable degradation behaviour of stavudine and zidovudine under hydrolytic, oxidative and photolytic conditions.

  Journal of pharmaceutical and biomedical analysis 20040629

• Synthesis and conformational analysis of 1-[2,4-dideoxy-4-C-hydroxymethyl-alpha-l-lyxopyranosyl]thymine.

  The Journal of organic chemistry 20040625

• A novel method for the preparation of nucleoside triphosphates from activated nucleoside phosphoramidates.

  Organic letters 20040624

• A theoretical study of structures and electron affinities of radical anions of guanine-cytosine, adenine-thymine, and hypoxanthine-cytosine base pairs.

  Journal of computational chemistry 20040601

• Interleukin 10 gene promoter polymorphisms are associated with chronic periodontitis.

  Journal of clinical periodontology 20040601

• Association of tumor necrosis factor receptor type 2 +587 gene polymorphism with severe chronic periodontitis.

  Journal of clinical periodontology 20040601

• Repair of UV-induced thymine dimers is compromised in cells expressing the E6 protein from human papillomaviruses types 5 and 18.

  British journal of cancer 20040601

• Multiplicity of strand incision at G:T base mismatches in DNA by human cell extracts.

  Biochemistry 20040601

• Pre-steady-state kinetic studies of the fidelity and mechanism of polymerization catalyzed by truncated human DNA polymerase lambda.

  Biochemistry 20040601

• A new mouse model of type 2 diabetes, produced by N-ethyl-nitrosourea mutagenesis, is the result of a missense mutation in the glucokinase gene.

  Diabetes 20040601

• Distribution of the serotonin 2C (5HT2C) receptor gene -759C/T polymorphism in patients with schizophrenia and normal controls.

  Psychiatric genetics 20040601

• 2-Pyrimidinone as a probe for studying the EcoRII DNA methyltransferase-substrate interaction.

  European journal of biochemistry 20040601

• Inhibition of DNA polymerization and antifungal specificity of furanocoumarins present in traditional medicines.

  Photochemistry and photobiology 20040601

• Molecular electron affinities and the calculation of the temperature dependence of the electron-capture detector response.

  Journal of chromatography. A 20040528

• C34T AMP deaminase 1 gene mutation protects cardiac function in donors.

  Transplantation 20040527

• Highly efficient photochemical 2'-deoxyribonolactone formation at the diagonal loop of a 5-iodouracil-containing antiparallel G-quartet.

  Journal of the American Chemical Society 20040526

• Validated liquid chromatographic determination of 5-fluorouracil in human plasma.

  Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 20040525

• 5-Formyluracil-induced perturbations of DNA function.

  Biochemistry 20040518

• Exon 15 BRAF mutations are uncommon in melanomas arising in nonsun-exposed sites.

  Clinical cancer research : an official journal of the American Association for Cancer Research 20040515

• Compositional nonrandomness upstream of start codons in archaebacteria.

  Gene 20040512

• Crystal structure of vancosaminyltransferase GtfD from the vancomycin biosynthetic pathway: interactions with acceptor and nucleotide ligands.

  Biochemistry 20040511

• Ni(II).Arg-Gly-His-DNA interactions: investigation into the basis for minor-groove binding and recognition.

  Journal of the American Chemical Society 20040505

• 2('),3(')-didehydro-2('),3(')-dideoxynucleosides are degraded to furfuryl alcohol under acidic conditions.

  Bioorganic & medicinal chemistry letters 20040503

• The effect of fluoropyrimidines with or without thymidine phosphorylase inhibitor on the expression of thymidine phosphorylase.

  European journal of pharmacology 20040503

• Characterisation of penciclovir resistant acyclovir sensitive herpes simplex virus type 2 isolated from an AIDS patient.

  Journal of medical virology 20040501

• Phylogeography of Aglais urticae (Lepidoptera) based on DNA sequences of the mitochondrial COI gene and control region.

  Molecular phylogenetics and evolution 20040501

• A promoter polymorphism in the CD14 gene is associated with elevated levels of soluble CD14 but not with IgE or atopic diseases.

  Allergy 20040501

• Neuronal nitric oxide synthase gene polymorphism and IgE-mediated allergy in the Central European population.

  Allergy 20040501

• The O-antigen gene cluster of Shigella boydii O11 and functional identification of its wzy gene.

  FEMS microbiology letters 20040501

• Investigation of the human ANP gene in type 1 diabetic nephropathy: case-control and follow-up studies.

  Diabetes 20040501

• Amelogenin p.M1T and p.W4S mutations underlying hypoplastic X-linked amelogenesis imperfecta.

  Journal of dental research 20040501

• Refinement of a therapeutic Shiga toxin-binding probiotic for human trials.

  The Journal of infectious diseases 20040501

• Efficiency, fidelity and enzymatic switching during translesion DNA synthesis.

  Cell cycle (Georgetown, Tex.) 20040501

• Autosomal-dominant pseudohypoaldosteronism type 1 in a Turkish family is associated with a novel nonsense mutation in the human mineralocorticoid receptor gene.

  The Journal of clinical endocrinology and metabolism 20040501

• BRAF(V599E) mutation is the leading genetic event in adult sporadic papillary thyroid carcinomas.

  The Journal of clinical endocrinology and metabolism 20040501

• Structural requirements for efficient phosphorylation of nucleotide analogs by human thymidylate kinase.

  Mini reviews in medicinal chemistry 20040501

• 'Lock-in'-cycloSal-pronucleotides - a new generation of chemical Trojan Horses?

  Mini reviews in medicinal chemistry 20040501

• Synthesis and X-ray study of the 6-(N-pyrrolyl)purine and thymine derivatives of 1-aminocyclopropane-1-carboxylic acid.

  The journal of peptide research : official journal of the American Peptide Society 20040501

• Plastid sequence evolution: a new pattern of nucleotide substitutions in the Cucurbitaceae.

  Journal of molecular evolution 20040501

• Selectivity of quadruplex DNA stationary phases toward amino acids in homodipeptides and alanyl dipeptides.

  Electrophoresis 20040501

• Dihydrothymine lesion in X-irradiated DNA: characterization at the molecular level and detection in cells.

  International journal of radiation biology 20040501

• [Population study of frequency of methylenetetrahydrofolate reductase C677T gene polymorphism in Yakutia].

  Genetika 20040501

• Glycosylation reaction of unprotected sugars with hydroxyalkylthymine.

  Nucleosides, nucleotides & nucleic acids 20040501

• Photo-irradiated titanium dioxide catalyzes site specific DNA damage via generation of hydrogen peroxide.

  Free radical research 20040501

• Single-stranded breaks in DNA but not oxidative DNA base damages block transcriptional elongation by RNA polymerase II in HeLa cell nuclear extracts.

  The Journal of biological chemistry 20040430

• Altered active site flexibility and a structural metal-binding site in eukaryotic dUTPase: kinetic characterization, folding, and crystallographic studies of the homotrimeric Drosophila enzyme.

  The Journal of biological chemistry 20040423

• Mitochondrial deoxyribonucleotides, pool sizes, synthesis, and regulation.

  The Journal of biological chemistry 20040423

• Reconstitution of F factor DNA replication in vitro with purified proteins.

  The Journal of biological chemistry 20040423

• Site-specific dissociation of DNA bases by slow electrons at early stages of irradiation.

  Physical review letters 20040423

• Preparation and antiviral properties of new acyclic, achiral nucleoside analogues: 1- or 9-[3-hydroxy-2-(hydroxymethyl)prop-1-enyl]nucleobases and 1- or 9-[2,3-dihydroxy-2-(hydroxymethyl)propyl]nucleobases.

  Organic & biomolecular chemistry 20040421

• AknK is an L-2-deoxyfucosyltransferase in the biosynthesis of the anthracycline aclacinomycin A.

  Biochemistry 20040420

• TDDFT investigation on nucleic acid bases: comparison with experiments and standard approach.

  Journal of computational chemistry 20040415

• Expression of integrin beta1 and its roles on adhesion between different cell cycle hepatocellular carcinoma cells (SMMC-7721) and human umbilical vein endothelial cells.

  Colloids and surfaces. B, Biointerfaces 20040415

• The alpha-helical peptide nucleic acid concept: merger of peptide secondary structure and codified nucleic acid recognition.

  Journal of the American Chemical Society 20040414

• Sequence and pH effects of LNA-containing triple helix-forming oligonucleotides: physical chemistry, biochemistry, and modeling studies.

  Biochemistry 20040413

• A molecular dissection of the interaction between the transcription factor Gata-1 zinc finger and DNA.

  Biochemical and biophysical research communications 20040409

• Exciplex formation between pyrene and guanine in highly polar solvents.

  Chemical communications (Cambridge, England) 20040407

• Azidothymidine promotes free radical generation by activated macrophages and hydrogen peroxide-iron-mediated oxidation in a cell-free system.

  Biochimica et biophysica acta 20040405

• Differential specificity of human and Escherichia coli endonuclease III and VIII homologues for oxidative base lesions.

  The Journal of biological chemistry 20040402

• New insights in dihydropyrimidine dehydrogenase deficiency: a pivotal role for beta-aminoisobutyric acid?

  The Biochemical journal 20040401

• Qualitative and quantitative analyses of the decomposition products that arise from the exposure of thymine to monochromatic ultrasoft X rays and 60Co gamma rays in the solid state.

  Radiation research 20040401

• Ion desorption from DNA components irradiated with 0.5 keV ultrasoft X-ray photons.

  Radiation research 20040401

• Familial myopathy: new insights into the T14709C mitochondrial tRNA mutation.

  Annals of neurology 20040401

• S-layer glycan-specific loci on the chromosome of Geobacillus stearothermophilus NRS 2004/3a and dTDP-L-rhamnose biosynthesis potential of G. stearothermophilus strains.

  Microbiology (Reading, England) 20040401

• Insertion of a thymine (+T) in the 13 base pair inverted repeat of the Neisseria gonorrhoeae mtr promoter region and antibiotic susceptibility.

  International journal of antimicrobial agents 20040401

• Novel mutations of the RNA-specific adenosine deaminase gene (DSRAD) in Chinese families with dyschromatosis symmetrica hereditaria.

  The Journal of investigative dermatology 20040401

• Phenotypic variations in patients with a 1630 A>T point mutation in the PAX6 gene.

  Canadian journal of ophthalmology. Journal canadien d'ophtalmologie 20040401

• Synthesis and evaluation of a conformationally constrained pyridazinone PNA-monomer for recognition of thymine in triple-helix structures.

  Bioorganic & medicinal chemistry letters 20040322

• Comparative kinetics of nucleotide analog incorporation by vent DNA polymerase.

  The Journal of biological chemistry 20040319

• Synthesis and evaluation of (1S,2R/1R,2S)-aminocyclohexylglycyl PNAs as conformationally preorganized PNA analogues for DNA/RNA recognition.

  The Journal of organic chemistry 20040319

• Synthetic creatinine receptor: imprinting of a Lewis acidic zinc(II)cyclen binding site to shape its molecular recognition selectivity.

  Journal of the American Chemical Society 20040317

• Nucleotide excision repair of 5-formyluracil in vitro is enhanced by the presence of mismatched bases.

  Biochemistry 20040316

• QSAR study on some anti-HIV HEPT analogues using physicochemical and topological parameters.

  Bioorganic & medicinal chemistry 20040315

• Metal-mediated oxidative damage to cellular and isolated DNA by gallic acid, a metabolite of antioxidant propyl gallate.

  Mutation research 20040314

• UV-visible spectral identification of the solution-phase and solid-phase permanganate oxidation reactions of thymine acetic acid.

  Bioorganic & medicinal chemistry letters 20040308

• Nucleic acid binding properties of thyminyl and adeninyl pyrrolidine-amide oligonucleotide mimics (POM).

  Chemical communications (Cambridge, England) 20040307

• Preferential cis-syn thymine dimer bypass by DNA polymerase eta occurs with biased fidelity.

  Nature 20040304

• Stereoselective excision of thymine glycol lesions by mammalian cell extracts.

  DNA repair 20040304

• A role for DNA polymerase V in G --> T mutations from the major benzo[a]pyrene N2-dG adduct when studied in a 5'-TGT sequence in E. coli.

  DNA repair 20040304

• Nucleophilic participation in the transition state for human thymidine phosphorylase.

  Journal of the American Chemical Society 20040303

• Long-range order of organized oligonucleotide monolayers on Au(111) electrodes.

  Langmuir : the ACS journal of surfaces and colloids 20040302

• Photochemical assembly of gold nanoparticles utilizing the photodimerization of thymine.

  Langmuir : the ACS journal of surfaces and colloids 20040302

• Association of the human adiponectin gene and insulin resistance.

  European journal of human genetics : EJHG 20040301

• High-level expression and purification of untagged and histidine-tagged HIV-1 reverse transcriptase.

  Protein expression and purification 20040301

• Inhibition of metastasis of tumor cells overexpressing thymidine phosphorylase by 2-deoxy-L-ribose.

  Cancer research 20040301

• DNA methylation as an epigenetic regulator of neural 5-lipoxygenase expression: evidence in human NT2 and NT2-N cells.

  Journal of neurochemistry 20040301

• Association of a programmed death 1 gene polymorphism with the development of rheumatoid arthritis, but not systemic lupus erythematosus.

  Arthritis and rheumatism 20040301

• Comparative study on Tp53 gene mutations in lung tumors from rats exposed to 239Pu, 237Np and 222Rn.

  Journal of radiation research 20040301

• A novel mutation in the PITX2 gene in a family with Axenfeld-Rieger syndrome.

  Ophthalmic genetics 20040301

• [Gene modification and high prokaryotic expression of porcine interferon alpha-1].

  Sheng wu gong cheng xue bao = Chinese journal of biotechnology 20040301

• A new method for analysis of AZT-triphosphate and nucleotide-triphosphates.

  Biochemical and biophysical research communications 20040227

• Whole-blood cultures from renal-transplant patients stimulated ex vivo show that the effects of cyclosporine on lymphocyte proliferation are related to P-glycoprotein expression.

  Transplantation 20040227

• Pre-steady-state kinetic studies of the fidelity of Sulfolobus solfataricus P2 DNA polymerase IV.

  Biochemistry 20040224

• Mechanism of DNA polymerization catalyzed by Sulfolobus solfataricus P2 DNA polymerase IV.

  Biochemistry 20040224

• 4'-pivaloyl substituted thymidine as a precursor for the thymyl radical: an EPR spectroscopic study.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20040220

• Disruption of dTDP-rhamnose biosynthesis modifies lipopolysaccharide core, exopolysaccharide production, and root colonization in Azospirillum brasilense.

  FEMS microbiology letters 20040216

• Association between the interleukin-1beta C(-511)T polymorphism and blood pressure in a Chinese hypertensive population.

  Immunology letters 20040215

• Excess electron-transfer-based repair of a Cis-Syn thymine dimer in DNA is not sequence dependent.

  Journal of the American Chemical Society 20040211

• Lysine directed cross-linking of viral DNA-RNA:DNA hybrid substrate to the isolated RNase H domain of HIV-1 reverse transcriptase.

  Biochemistry 20040210

• Substrate discrimination by formamidopyrimidine-DNA glycosylase: a mutational analysis.

  The Journal of biological chemistry 20040206

• Glycosidic bond cleavage of thymidine by low-energy electrons.

  Journal of the American Chemical Society 20040204

• Separation of purine and pyrimidine bases by capillary electrophoresis using beta-cyclodextrin as an additive.

  Journal of pharmaceutical and biomedical analysis 20040204

• Base J, found in nuclear DNA of Trypanosoma brucei, is not a target for DNA glycosylases.

  DNA repair 20040203

• Direct comparison of A- and T-strand minor groove interactions in DNA curvature at A tracts.

  Biochemistry 20040203

• Nephrolithiasis in a child with glucose-galactose malabsorption.

  Pediatric nephrology (Berlin, Germany) 20040201

• Structure of the Shigella dysenteriae 7 O antigen gene cluster and identification of its antigen specific genes.

  Microbial pathogenesis 20040201

• Conformational analysis of canonical 2-deoxyribonucleotides. 1. Pyrimidine nucleotides.

  Journal of biomolecular structure & dynamics 20040201

• Thermodynamic cooperativity and kinetic proofreading in DNA damage recognition and repair.

  Cell cycle (Georgetown, Tex.) 20040201

• Seasonal affective disorder and the G-protein beta-3-subunit C825T polymorphism.

  Biological psychiatry 20040201

• Metabolic block at early stages of the glycolytic pathway activates the Rcs phosphorelay system via increased synthesis of dTDP-glucose in Escherichia coli.

  Molecular microbiology 20040201

• Two distinct compound heterozygous constellations (R277X/IVS34-1G>C and R277X/R1511X) in the thyroglobulin (TG) gene in affected individuals of a Brazilian kindred with congenital goiter and defective TG synthesis.

  The Journal of clinical endocrinology and metabolism 20040201

• Self-assembling of cytosine nucleoside into triply-bound dimers in acid media. A comprehensive evaluation of proton-bound pyrimidine nucleosides by electrospray tandem mass spectrometry, X-rays diffractometry, and theoretical calculations.

  Journal of the American Society for Mass Spectrometry 20040201

• T-786C and G894T variants of the endothelial nitric oxide synthase gene and training-induced correction of endothelial dysfunction in coronary artery disease patient.

  Arteriosclerosis, thrombosis, and vascular biology 20040201

• Fluorescence studies of the interaction of pyrenylmethyl tributylphosphonium bromide with double-strand polynucleotides.

  Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 20040201

• DNA photosensitization by indoprofen - is DNA damage photoinduced by indoprofen or by its photoproducts?

  Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 20040201

• Association of oestrogen receptor alpha gene polymorphism with the angiographic extent of coronary artery disease.

  European heart journal 20040201

• Preparation and evaluation of molecularly imprinted polymers based on 9-ethyladenine for the recognition of nucleotide bases in capillary electrochromatography.

  Electrophoresis 20040201

• Bacterial programmed cell death systems as targets for antibiotics.

  Trends in microbiology 20040201

• Cloning, expression, and biological function of a dTDP-deoxyglucose epimerase (gerF) gene from Streptomyces sp. GERI-155.

  Biotechnology letters 20040201

• [Molecular differences in Adh1-F and Adh1-S alleles in the sugar beet Beta vulgaris L].

  Genetika 20040201

• Theoretical study on the excited states of psoralen compounds bonded to a thymine residue.

  Journal of computational chemistry 20040130

• Synthesis and antiviral activity of (Z)- and (E)-2,2-[bis(hydroxymethyl)cyclopropylidene]methylpurines and -pyrimidines: second-generation methylenecyclopropane analogues of nucleosides.

  Journal of medicinal chemistry 20040129

• Enzymatic synthesis of phosphoroselenoate DNA using thymidine 5'-(alpha-P-seleno)triphosphate and DNA polymerase for X-ray crystallography via MAD.

  Journal of the American Chemical Society 20040121

• Selective formation of stable triplexes including a TA or a CG interrupting site with new bicyclic nucleoside analogues (WNA).

  Journal of the American Chemical Society 20040121

• Effect of the methylenetetrahydrofolate reductase C677T polymorphism on chemosensitivity of colon and breast cancer cells to 5-fluorouracil and methotrexate.

  Journal of the National Cancer Institute 20040121

• Synthesis and antiviral activity of monofluorinated cyclopropanoid nucleosides.

  Organic & biomolecular chemistry 20040121

• Role of histidine-85 in the catalytic mechanism of thymidine phosphorylase as assessed by targeted molecular dynamics simulations and quantum mechanical calculations.

  Biochemistry 20040120

• High resolution X-ray structure of dTDP-glucose 4,6-dehydratase from Streptomyces venezuelae.

  The Journal of biological chemistry 20040116

• Systematic quantum chemical study of DNA-base tautomers.

  Journal of computational chemistry 20040115

• Ground- and excited-state properties of DNA base molecules from plane-wave calculations using ultrasoft pseudopotentials.

  Journal of computational chemistry 20040115

• Apoptosis triggered by DNA damage O6-methylguanine in human lymphocytes requires DNA replication and is mediated by p53 and Fas/CD95/Apo-1.

  Oncogene 20040115

• X-ray analyses of d(GCGAXAGC) containing G and T at X: the base-intercalated duplex is still stable even in point mutants at the fifth residue.

  Journal of synchrotron radiation 20040101

• A new mutation (intron 9 +1 G>T) in the SLC12A3 gene is linked to Gitelman syndrome in Gypsies.

  Kidney international 20040101

• Polymorphism of the MICA gene and risk for oral submucous fibrosis.

  Journal of oral pathology & medicine : official publication of the International Association of Oral Pathologists and the American Academy of Oral Pathology 20040101

• Characteristics of mutations at the D5S818 locus studied with a tightly linked marker.

  Transfusion 20040101

• Low-pass sequencing for microbial comparative genomics.

  BMC genomics 20040101

• Mitochondrial neurogastrointestinal encephalomyopathy (MNGIE): a disease of two genomes.

  The neurologist 20040101

• No evidence of an association between the T16189C mtDNA variant and late onset dementia.

  Journal of medical genetics 20040101

• Biodegradation of DNA and nucleotides to nucleosides and free bases.

  Farmaco (Societa chimica italiana : 1989) 20040101

• The C3435T MDR1 gene polymorphism is not associated with susceptibility for ulcerative colitis in Greek population.

  Gastroenterology 20040101

• Cyclosal-pronucleotides--development of first and second generation chemical trojan horses for antiviral chemotherapy.

  Frontiers in bioscience : a journal and virtual library 20040101

• Use of folic acid casei medium reveals trimethoprim susceptibility of Lactobacillus species.

  Letters in applied microbiology 20040101

• Artificial neural networks: non-linear QSAR studies of HEPT derivatives as HIV-1 reverse transcriptase inhibitors.

  Molecular diversity 20040101

• Urinary excretion of beta-aminoisobutyric acid in hematological diseases.

  Rinsho byori. The Japanese journal of clinical pathology 20040101

• Methylenetetrahydrofolate reductase and transcobalamin genetic polymorphisms in human spontaneous abortion: biological and clinical implications.

  Reproductive biology and endocrinology : RB&E 20040101

• Radiation-induced DNA damage: formation, measurement, and biochemical features.

  Journal of environmental pathology, toxicology and oncology : official organ of the International Society for Environmental Toxicology and Cancer 20040101

• A haplotype constituted of four MMP-2 promoter polymorphisms (-1575G/A, -1306C/T, -790T/G and -735C/T) is associated with coronary triple-vessel disease.

  Matrix biology : journal of the International Society for Matrix Biology 20040101

• In vitro mutagenesis of Xanthomonas campestris alpha-amylase gene by partially replacing deoxythymidine triphosphate with 5-bromo-2'-deoxyuridine-5'-triphosphate using a PCR technique.

  Biotechnology letters 20040101

• [Dynamics of charge transfer along an oligonucleotide at finite temperature].

  Biofizika 20040101

• Anti-cowpox virus activities of certain adenosine analogs, arabinofuranosyl nucleosides, and 2'-fluoro-arabinofuranosyl nucleosides.

  Nucleosides, nucleotides & nucleic acids 20040101

• Synthesis of D-altritol nucleosides with a 3'-O-tert-butyldimethylsilyl protecting group.

  Nucleosides, nucleotides & nucleic acids 20040101

• [Osteogenesis imperfecta Type 1: a case presentation with a new mutation in gene COL1A1].

  Klinische Padiatrie 20040101

• Mutation at the position 2058 of the 23S rRNA as a cause of macrolide resistance in Streptococcus pyogenes.

  Annals of clinical microbiology and antimicrobials 20040101

• The synthesis of [([beta-D-ribofuranosyloxy)methyl]nucleosides.

  Nucleosides, nucleotides & nucleic acids 20040101

• The MB2 gene family of Plasmodium species has a unique combination of S1 and GTP-binding domains.

  BMC bioinformatics 20040101

• Novel thymine-functionalized polystyrenes for applications in biotechnology. 2. Adsorption of model proteins.

  Biomacromolecules 20040101

• Retroviral and lentiviral vector titration by the analysis of the activity of viral reverse transcriptase.

  Methods in molecular biology (Clifton, N.J.) 20040101

• Inhibitory effect of topical applications of nondenatured soymilk on the formation and growth of UVB-induced skin tumors.

  Oncology research 20040101

• Head imaging abnormalities in dihydropyrimidine dehydrogenase deficiency.

  Journal of inherited metabolic disease 20040101

• Site-specific mutagenesis of Drosophila proliferating cell nuclear antigen enhances its effects on calf thymus DNA polymerase delta.

  BMC biochemistry 20040101

• Effect of matrix and solvent on the analysis of novel poly(phenylenevinylene) derivatives by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.

  Rapid communications in mass spectrometry : RCM 20040101

• Sequence periodicity of Escherichia coli is concentrated in intergenic regions.

  BMC molecular biology 20040101

• Glycogen synthase kinase-3 regulates IGFBP-1 gene transcription through the thymine-rich insulin response element.

  BMC molecular biology 20040101

• The C677T methylenetetrahydrofolate reductase variant and third trimester obstetrical complications in women with unexplained elevations of maternal serum alpha-fetoprotein.

  Reproductive biology and endocrinology : RB&E 20040101

• MTHFR C677T polymorphism, folic acid and hyperhomocysteinemia in levodopa treated patients with Parkinson's disease.

  Journal of neural transmission. Supplementum 20040101

• Pro-oxidant properties and cytotoxicity of AZT-monophosphate and AZT.

  Cardiovascular toxicology 20040101

• Phosphorylation of thymidine and AZT in heart mitochondria: elucidation of a novel mechanism of AZT cardiotoxicity.

  Cardiovascular toxicology 20040101

• Methods to find out the expression of activated genes.

  Reproductive biology and endocrinology : RB&E 20040101

• [Photoreactive dTTP analogues as substrates for thermostable DNA polymerase from Thermus thermophilus B35].

  Bioorganicheskaia khimiia 20040101

• A CpG island hypermethylation profile of primary colorectal carcinomas and colon cancer cell lines.

  Molecular cancer 20040101

• Mechanism of ganciclovir uptake by rabbit retina and human retinal pigmented epithelium cell line ARPE-19.

  Current eye research 20040101

• [Antisense oligonucleotides with antitumor activity].

  Magyar onkologia 20040101

• [The clinical importance of methylenetetrahydrofolate reductase (MTHFR) C677T polymorphism in the 5-fluoropyrimidine-based therapy of metastatic colorectal tumours].

  Magyar onkologia 20040101

• Characterization of novel nucleoside analogs by electrospray ionization mass spectra.

  European journal of mass spectrometry (Chichester, England) 20040101

• Characterization of G-rich and T-rich oligonucleotides using ion-pair reversed-phase high-performance liquid chromatography/tandem electrospray ionization mass spectrometry.

  European journal of mass spectrometry (Chichester, England) 20040101

• Genetics and variation in phenotype in Noonan syndrome.

  Hormone research 20040101

• [Polymethylene derivatives of nucleic bases with omega-functional groups. III. N-[7-(2-oxocyclohexyl)-7-oxoheptyl]-substituted pyrimidines].

  Bioorganicheskaia khimiia 20040101

• Mitochondrial inhibition of uracil-DNA glycosylase is not mutagenic.

  Molecular cancer 20040101

• The ASRG database: identification and survey of Arabidopsis thaliana genes involved in pre-mRNA splicing.

  Genome biology 20040101

• Novel PS1 mutation in a Bavarian kindred with familial Alzheimer disease.

  Alzheimer disease and associated disorders 20040101

• Association between transforming growth factor beta1 gene polymorphisms and IgA nephropathy.

  Journal of nephrology 20040101

• The association of Alu repeats with the generation of potential AU-rich elements (ARE) at 3' untranslated regions.

  BMC genomics 20040101

• The exceptionally high rate of spontaneous mutations in the polymerase delta proofreading exonuclease-deficient Saccharomyces cerevisiae strain starved for adenine.

  BMC genetics 20040101

• [C825T polymorphism of the GNB3 gene codifying the G-protein beta3-subunit and cardiovascular risk].

  Annali italiani di medicina interna : organo ufficiale della Societa italiana di medicina interna 20040101

• Low-energy Auger- and photo-electron effects on the degradation of thymine by ultrasoft X-irradiation.

  International journal of radiation biology 20040101

• Is coulomb explosion a damaging mechanism for (125)IUdR?

  International journal of radiation biology 20040101

• Direct measurement of nucleoside monophosphate delivery from a phosphoramidate pronucleotide by stable isotope labeling and LC-ESI(-)-MS/MS.

  Molecular pharmaceutics 20040101

• Damage specificity of human DNA glycosylases for oxidative pyrimidine lesions.

  Nucleic acids symposium series (2004) 20040101

• Synthesis of pyrrolidine-based oxy-peptide nucleic acids that contain four bases and their properties.

  Nucleic acids symposium series (2004) 20040101

• Synthesis of ferrocenyl carbodiimide as a novel ferrocenyl reagent of single stranded DNA.

  Nucleic acids symposium series (2004) 20040101

• NMR study on the photoresponsive DNA tethering an azobenzene. Assignment of the absolute configuration of two diastereomers and structure determination of their duplexes in the trans-form.

  Journal of the American Chemical Society 20031231

• Tight binding of deoxyribonucleotide triphosphates to human thymidine kinase 2 expressed in Escherichia coli. Purification and partial characterization of its dimeric and tetrameric forms.

  Biochemistry 20031230

• Thermolytic carbonates for potential 5'-hydroxyl protection of deoxyribonucleosides.

  The Journal of organic chemistry 20031226

• Cathodic adsorptive stripping voltammetric behaviour of guanine in the presence of copper at the static mercury drop electrode.

  Talanta 20031223

• Identification and characterization of an intermediate in the alkali degradation of (6-4) photoproduct-containing DNA.

  The Journal of biological chemistry 20031219

• Novel lavendamycin analogues as potent HIV-reverse transcriptase inhibitors: synthesis and evaluation of anti-reverse transcriptase activity of amide and ester analogues of lavendamycin.

  Journal of medicinal chemistry 20031218

• True stabilization energies for the optimal planar hydrogen-bonded and stacked structures of guanine...cytosine, adenine...thymine, and their 9- and 1-methyl derivatives: complete basis set calculations at the MP2 and CCSD(T) levels and comparison with experiment.

  Journal of the American Chemical Society 20031217

• Association of DNA quadruplexes through G:C:G:C tetrads. Solution structure of d(GCGGTGGAT).

  Biochemistry 20031216

• 1,3-dihydrobenzo[c]furan nucleoside analogues: additional studies of the thymine derivative.

  Bioorganic & medicinal chemistry letters 20031215

• Mouse Rev1 protein interacts with multiple DNA polymerases involved in translesion DNA synthesis.

  The EMBO journal 20031215

• Gene expression array profile of human osteosarcoma.

  British journal of cancer 20031215

• In vitro and in vivo dimerization of human endonuclease III stimulates its activity.

  The Journal of biological chemistry 20031212

• Efficiency of extension of mismatched primer termini across from cisplatin and oxaliplatin adducts by human DNA polymerases beta and eta in vitro.

  Biochemistry 20031209

• Different modes of interaction between hydrated magnesium ion and DNA functional groups: database analysis and ab initio studies.

  Journal of biomolecular structure & dynamics 20031201

• The production of 6-deoxy-L-talan from Actinobacillus actinomycetemcomitans via bacterial coupling in vitro.

  Oral microbiology and immunology 20031201

• Why are there four letters in the genetic alphabet?

  Nature reviews. Genetics 20031201

• Exon 6 and 2 peroxisome proliferator-activated receptor-gamma polymorphisms in polycystic ovary syndrome.

  The Journal of clinical endocrinology and metabolism 20031201

• CTLA-4 AT-repeat polymorphism reduces the inhibitory function of CTLA-4 in Graves' disease.

  Thyroid : official journal of the American Thyroid Association 20031201

• Water soluble vitamin E (TMG) as a radioprotector.

  Indian journal of experimental biology 20031201

• Strand-specific processing of 8-oxoguanine by the human mismatch repair pathway: inefficient removal of 8-oxoguanine paired with adenine or cytosine.

  DNA repair 20031121

• The disappearance of thymine dimers from DNA: an error-correcting mechanism. 1963.

  DNA repair 20031121

• One-pot enzymatic production of dTDP-4-keto-6-deoxy-D-glucose from dTMP and glucose-1-phosphate.

  Biotechnology and bioengineering 20031120

• Minor groove binding DNA ligands with expanded A/T sequence length recognition, selective binding to bent DNA regions and enhanced fluorescent properties.

  Biochemistry 20031118

• Thymine-rich single-stranded DNA activates Mcm4/6/7 helicase on Y-fork and bubble-like substrates.

  The EMBO journal 20031117

• The essential C family DnaE polymerase is error-prone and efficient at lesion bypass.

  The Journal of biological chemistry 20031107

• Deoxyribonucleotide pool imbalance stimulates deletions in HeLa cell mitochondrial DNA.

  The Journal of biological chemistry 20031107

• Synthesis of hydroxymethyl branched [3.2.0]bicyclic nucleosides using a regioselective oxetane ring-formation.

  Organic & biomolecular chemistry 20031107

• Synthesis and biological evaluation of 5-substituted derivatives of the potent antiherpes agent (north)-methanocarbathymine.

  Journal of medicinal chemistry 20031106

• Identification of a novel class of inhibitor of human and Escherichia coli thymidine phosphorylase by in silico screening.

  Bioorganic & medicinal chemistry letters 20031103

• Dihydropyrimidine dehydrogenase in normal and malignant endometrium: relationship with cell proliferation and thymidine phosphorylase.

  Virchows Archiv : an international journal of pathology 20031101

• Dizygotic twinning is not associated with methylenetetrahydrofolate reductase haplotypes.

  Human reproduction (Oxford, England) 20031101

• Constitutional mutation of keratin 13 gene in familial white sponge nevus.

  Oral surgery, oral medicine, oral pathology, oral radiology, and endodontics 20031101

• Differential induction of topoisomerase I-DNA cleavage complexes by the indenoisoquinoline MJ-III-65 (NSC 706744) and camptothecin: base sequence analysis and activity against camptothecin-resistant topoisomerases I.

  Cancer research 20031101

• Molecular characterization of thymidine kinase from Ureaplasma urealyticum: nucleoside analogues as potent inhibitors of mycoplasma growth.

  Molecular microbiology 20031101

• Rapid development of gene-tagged microsatellite markers from bacterial artificial chromosome clones using anchored TAA repeat primers.

  BioTechniques 20031101

• Evolutionary optimization, backpropagation, and data preparation issues in QSAR modeling of HIV inhibition by HEPT derivatives.

  Bio Systems 20031101

• The C(-260)>T gene polymorphism in the promoter of the CD14 monocyte receptor gene is not associated with acute myocardial infarction.

  Clinical and experimental medicine 20031101

• Vitamin A exerts a photoprotective action in skin by absorbing ultraviolet B radiation.

  The Journal of investigative dermatology 20031101

• Electrospray tandem mass-spectrometric analysis of diastereo- and stereoisomeric pyrimidine nucleoside analogues based on the 1,3-dihydrobenzo[c]furan core.

  Carbohydrate research 20031031

• On the aromatic character of the heterocyclic bases of DNA and RNA.

  The Journal of organic chemistry 20031031

• Conformational restriction of nucleosides by spirocyclic annulation at C4' including synthesis of the complementary dideoxy and didehydrodideoxy analogues.

  The Journal of organic chemistry 20031031

• A four-base paired genetic helix with expanded size.

  Science (New York, N.Y.) 20031031

• Chemical rearrangement and repair pathways of 1,N6-ethenoadenine.

  Mutation research 20031029

• Enzymology of repair of etheno-adducts.

  Mutation research 20031029

• Non-nucleoside inhibitors of HIV-1 reverse transcriptase inhibit phosphorolysis and resensitize the 3'-azido-3'-deoxythymidine (AZT)-resistant polymerase to AZT-5'-triphosphate.

  The Journal of biological chemistry 20031024

• Independent generation of 5-(2'-deoxycytidinyl)methyl radical and the formation of a novel cross-link lesion between 5-methylcytosine and guanine.

  Journal of the American Chemical Society 20031022

• Synthesis and biological evaluation of thymine nucleosides fused with 3',4'-tetrahydrofuran ring.

  Bioorganic & medicinal chemistry letters 20031020

• Both gene expression for orotate phosphoribosyltransferase and its ratio to dihydropyrimidine dehydrogenase influence outcome following fluoropyrimidine-based chemotherapy for metastatic colorectal cancer.

  British journal of cancer 20031020

• O6-methylguanine-DNA-methyltransferase expression and gene polymorphisms in relation to chemotherapeutic response in metastatic melanoma.

  British journal of cancer 20031020

• The Y181C substitution in 3'-azido-3'-deoxythymidine-resistant human immunodeficiency virus, type 1, reverse transcriptase suppresses the ATP-mediated repair of the 3'-azido-3'-deoxythymidine 5'-monophosphate-terminated primer.

  The Journal of biological chemistry 20031017

• MBD4 deficiency reduces the apoptotic response to DNA-damaging agents in the murine small intestine.

  Oncogene 20031016

• Recognition and repair of the cyclobutane thymine dimer, a major cause of skin cancers, by the human excision nuclease.

  Genes & development 20031015

• DNA sequence recognition by bispyrazinonaphthalimides antitumor agents.

  Biochemistry 20031014

• Fluorescent supramolecular liquid crystalline polymers from nucleobase-terminated monomers.

  Chemical communications (Cambridge, England) 20031007

• Rigid, conjugated, fluoresceinated thymidine triphosphates: syntheses and polymerase mediated incorporation into DNA analogues.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20031006

• C174T polymorphism in the CNTF receptor gene is associated with fat-free mass in men and women.

  Journal of applied physiology (Bethesda, Md. : 1985) 20031001

• Structure and the energy of base pairing in non-natural bases of nucleic acids: the azaguanine-cytosine and azaadenine-thymine base pairs.

  Bioorganic chemistry 20031001

• Theoretical Ab initio study of the effects of methylation on the nature of hydrogen bonding in A:T base pair.

  Journal of biomolecular structure & dynamics 20031001

• Comparison of interleukin-1 genotypes in two populations with aggressive periodontitis.

  European journal of oral sciences 20031001

• Shape selective recognition of T.A base pairs by hairpin polyamides containing N-terminal 3-methoxy (and 3-chloro) thiophene residues.

  Bioorganic & medicinal chemistry 20031001

• Bacteriophage T4-encoded Stp can be replaced as activator of anticodon nuclease by a normal host cell metabolite.

  Molecular microbiology 20031001

• Pharmacogenetics of antidepressant medication intolerance.

  The American journal of psychiatry 20031001

• Cross section calculations for electron scattering from DNA and RNA bases.

  Radiation and environmental biophysics 20031001

• Exclusion of the human collagen type XVII (COL17A1) gene as the cause of Thiel-Behnke corneal dystrophy (CDB2) on chromosome 10q23-q25.

  Current eye research 20031001

• PNA-DNA chimeras containing 5-alkynyl-pyrimidine PNA units. Synthesis, binding properties, and enzymatic stability.

  Nucleosides, nucleotides & nucleic acids 20031001

• Changes in DNA base sequences in the mutant of Arabidopsis thaliana induced by low-energy N(+) implantation.

  Science in China. Series C, Life sciences 20031001

• Localizing cell division in spherical Escherichia coli by nucleoid occlusion.

  FEMS microbiology letters 20030926

• Molecular and functional analysis of the (6-4) photolyase from the hexactinellid Aphrocallistes vastus.

  Biochimica et biophysica acta 20030923

• Thymidine and thymidine-5'-O-monophosphate analogues as inhibitors of Mycobacterium tuberculosis thymidylate kinase.

  Bioorganic & medicinal chemistry letters 20030915

• Compromised incision of oxidized pyrimidines in liver mitochondria of mice deficient in NTH1 and OGG1 glycosylases.

  The Journal of biological chemistry 20030905

• Use of 2-aminopurine fluorescence to examine conformational changes during nucleotide incorporation by DNA polymerase I (Klenow fragment).

  Biochemistry 20030902

• Hologram quantitative structure-activity relationships investigations of non-nucleoside reverse transcriptase inhibitors.

  Current medicinal chemistry 20030901

• Gene-gene interaction between fetal MTHFR 677C>T and transcobalamin 776C>G polymorphisms in human spontaneous abortion.

  Human reproduction (Oxford, England) 20030901

• Purine and pyrimidine metabolites in children's urine.

  Clinica chimica acta; international journal of clinical chemistry 20030901

• Inhibition of telomerase activity in malignant glioma cells correlates with their sensitivity to temozolomide.

  British journal of cancer 20030901

• Contribution of phenolic compounds to the UV-B screening capacity of developing barley primary leaves in relation to DNA damage and repair under elevated UV-B levels.

  Phytochemistry 20030901

• The variation of dTDP-L-rhamnose pathway genes in Vibrio cholerae.

  Microbiology (Reading, England) 20030901

• Thiyl radical reaction with thymine: absolute rate constant for hydrogen abstraction and comparison to benzylic C-H bonds.

  Chemical research in toxicology 20030901

• Identification of DNA adducts derived from riddelliine, a carcinogenic pyrrolizidine alkaloid.

  Chemical research in toxicology 20030901

• Immunochemical detection of UV-induced DNA damage and repair.

  Journal of immunological methods 20030901

• Permanganate oxidation reactions of DNA: perspective in biological studies.

  Nucleosides, nucleotides & nucleic acids 20030901

• A comparative immunohistochemistry of O6-methylguanine-DNA methyltransferase and p53 in diffusely infiltrating astrocytomas.

  Neuropathology : official journal of the Japanese Society of Neuropathology 20030901

• The common 677C>T gene polymorphism of methylenetetrahydrofolate reductase gene is not associated with breast cancer risk.

  Breast cancer research and treatment 20030901

• Structure-activity relationship studies on a novel family of specific HIV-1 reverse transcriptase inhibitors.

  Antiviral chemistry & chemotherapy 20030901

• C18orf1 located on chromosome 18p11.2 may confer susceptibility to schizophrenia.

  Journal of medical and dental sciences 20030901

• Hyperhomocysteinemia in central retinal vein occlusion in young adults.

  Seminars in ophthalmology 20030901

• DNA recognition by the EcoRV restriction endonuclease probed using base analogues.

  Journal of molecular biology 20030829

• Replication of a cis-syn thymine dimer at atomic resolution.

  Nature 20030828

• (1S,2R/1R,2S)-ainocyclohexyl glycyl thymine PNA: synthesis, monomer crystal structures, and DNA/RNA hybridization studies.

  Organic letters 20030821

• High frequency of mitochondrial genome instability in human endometrial carcinomas.

  British journal of cancer 20030818

• Pairing of isolated nucleobases: double resonance laser spectroscopy of adenine-thymine.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20030818

• Interaction of T4 endonuclease V with DNA: importance of the flexible loop regions in protein-DNA interaction.

  The Journal of biological chemistry 20030815

• A novel -66T/C polymorphism in Fc epsilon RI alpha-chain promoter affecting the transcription activity: possible relationship to allergic diseases.

  Journal of immunology (Baltimore, Md. : 1950) 20030815

• Minimal effect of a low-fat/high soy diet for asymptomatic, hormonally naive prostate cancer patients.

  Clinical cancer research : an official journal of the American Association for Cancer Research 20030815

• Different mechanisms are used by insulin to repress three genes that contain a homologous thymine-rich insulin response element.

  FEBS letters 20030814

• Yeast pol eta holds a cis-syn thymine dimer loosely in the active site during elongation opposite the 3'-T of the dimer, but tightly opposite the 5'-T.

  Biochemistry 20030812

• Design of base-discriminating fluorescent nucleoside and its application to t/c SNP typing.

  Journal of the American Chemical Society 20030806

• Integrin beta3 Leu33Pro homozygosity and risk of cancer.

  Journal of the National Cancer Institute 20030806

• Bipyrimidine photoproducts rather than oxidative lesions are the main type of DNA damage involved in the genotoxic effect of solar UVA radiation.

  Biochemistry 20030805

• Increased variation in mtDNA in patients with familial sensorineural hearing impairment.

  Human genetics 20030801

• Free energy calculations for the relative binding affinity between DNA and lambda-repressor.

  Proteins 20030801

• Radical formation in pyrimidine bases after X, proton and alpha-particle irradiation.

  Radiation research 20030801

• Molecular genetic analysis for the Ae1 and A3 alleles.

  Transfusion 20030801

• Identification of different isoforms of eEF1A in the nuclear fraction of human T-lymphoblastic cancer cell line specifically binding to aptameric cytotoxic GT oligomers.

  European journal of biochemistry 20030801

• The root of the mammalian tree inferred from whole mitochondrial genomes.

  Molecular phylogenetics and evolution 20030801

• Single-nucleotide polymorphism in the CD14 promoter and periodontal disease expression in a Japanese population.

  Journal of dental research 20030801

• Vascular endothelial growth factor gene-460 C/T polymorphism is a biomarker for prostate cancer.

  Urology 20030801

• The -159 C-->T polymorphism of CD14 is associated with nonatopic asthma and food allergy.

  The Journal of allergy and clinical immunology 20030801

• Lack of association between the 7888 C/T polymorphism in the AID gene and atopy in a Spanish population.

  The Journal of allergy and clinical immunology 20030801

• Enantiomeric separation of chiral peptide nucleic acid monomers by capillary electrophoresis with charged cyclodextrins.

  Electrophoresis 20030801

• Distinct mechanisms of site-specific oxidative DNA damage by doxorubicin in the presence of copper(II) and NADPH-cytochrome P450 reductase.

  Cancer science 20030801

• Charge driven fragmentation of nucleobases.

  Physical review letters 20030801

• On the formation of cyclobutane pyrimidine dimers in UV-irradiated DNA: why are thymines more reactive?

  Photochemistry and photobiology 20030801

• Catechins induce oxidative damage to cellular and isolated DNA through the generation of reactive oxygen species.

  Free radical research 20030801

• Allele frequencies of +874T --> A single nucleotide polymorphism at the first intron of IFN-gamma gene in Alzheimer's disease patients.

  Aging clinical and experimental research 20030801

• Affinity labeling of a single guanine bulge.

  Journal of the American Chemical Society 20030730

• Base-dependent competitive adsorption of single-stranded DNA on gold.

  Journal of the American Chemical Society 20030730

• Surface salt bridges modulate DNA wrapping by the type II DNA-binding protein TF1.

  Biochemistry 20030729

• Properties of and substrate determinants for the exonuclease activity of human apurinic endonuclease Ape1.

  Journal of molecular biology 20030725

• 2'-chloro-2',3'-dideoxy-3'-fluoro-d-ribonucleosides: synthesis, stereospecificity, some chemical transformations, and conformational analysis.

  The Journal of organic chemistry 20030725

• Thermal analysis of the antiretroviral zidovudine (AZT) and evaluation of the compatibility with excipients used in solid dosage forms.

  International journal of pharmaceutics 20030724

• Increased temperature and 2-methyl-2,4-pentanediol change the DNA structure of both curved and uncurved adenine/thymine-rich sequences.

  Biochemistry 20030722

• Excess electron transfer in flavin-capped, thymine dimer-containing DNA hairpins.

  Chemical communications (Cambridge, England) 20030721

• Oxidative DNA damage following exposure to dimethylarsinous iodide: the formation of cis-thymine glycol.

  Toxicology letters 20030720

• Nonpolar thymine isosteres in the Ty3 polypurine tract DNA template modulate processing and provide a model for its recognition by Ty3 reverse transcriptase.

  The Journal of biological chemistry 20030718

• Biosynthesis of dTDP-3-acetamido-3,6-dideoxy-alpha-D-galactose in Aneurinibacillus thermoaerophilus L420-91T.

  The Journal of biological chemistry 20030718

• Rapid gas chromatographic-mass spectrometric diagnosis of dihydropyrimidine dehydrogenase deficiency and dihydropyrimidinase deficiency.

  Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 20030715

• Raman spectroscopy study of the interaction between biogenic polyamines and an alternating AT oligodeoxyribonucleotide.

  Biochimica et biophysica acta 20030709

• Associations between cardiorespiratory responses to exercise and the C34T AMPD1 gene polymorphism in the HERITAGE Family Study.

  Physiological genomics 20030707

• Structures and stabilities of small DNA dumbbells with Watson-Crick and Hoogsteen base pairs.

  Chembiochem : a European journal of chemical biology 20030707

• Sensitive method for the quantification of urinary pyrimidine metabolites in healthy adults by gas chromatography-tandem mass spectrometry.

  Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 20030705

• Use of HIV-1 reverse transcriptase recovered from human plasma for phenotypic drug susceptibility testing.

  AIDS (London, England) 20030704

• Handling and detection of 25 amol of near-infrared dye deoxynucleotide conjugates by capillary electrophoresis with laser-induced fluorescence detection.

  Journal of chromatography. A 20030704

• Design of artificial nucleobases for the recognition of the AT inversion by triple-helix forming oligonucleotides: a structure-stability relationship study and neighbour bases effect.

  Bioorganic & medicinal chemistry 20030703

• A de novo R589C mutation of anion exchanger 1 causing distal renal tubular acidosis.

  Pediatric nephrology (Berlin, Germany) 20030701

• Hereditary systemic amyloidosis associated with a new apolipoprotein AII stop codon mutation Stop78Arg.

  Kidney international 20030701

• Biological containment of genetically modified Lactococcus lactis for intestinal delivery of human interleukin 10.

  Nature biotechnology 20030701

• Nonnucleoside HIV-1 reverse transcriptase inhibitors: Part I. Synthesis and structure-activity relationship of 1-alkoxymethyl-5-alkyl-6-naphthylmethyl uracils as HEPT analogues.

  Chemical & pharmaceutical bulletin 20030701

• Effect of the C825T polymorphism of the G protein beta 3 subunit on the systolic blood pressure-lowering effect of clonidine in young, healthy male subjects.

  Clinical pharmacology and therapeutics 20030701

• Shifts in community composition provide a mechanism for maintenance of activity of soil yeasts in the presence of elevated copper levels.

  Canadian journal of microbiology 20030701

• Phagocytes produce 5-chlorouracil and 5-bromouracil, two mutagenic products of myeloperoxidase, in human inflammatory tissue.

  The Journal of biological chemistry 20030627

• Structure of the large subunit of class Ib ribonucleotide reductase from Salmonella typhimurium and its complexes with allosteric effectors.

  Journal of molecular biology 20030627

• Binding discrimination of MutS to a set of lesions and compound lesions (base damage and mismatch) reveals its potential role as a cisplatin-damaged DNA sensing protein.

  The Journal of biological chemistry 20030606

• Mismatch uracil glycosylase from Escherichia coli: a general mismatch or a specific DNA glycosylase?

  The Journal of biological chemistry 20030606

• Oxidative damage to cellular and isolated DNA by homocysteine: implications for carcinogenesis.

  Oncogene 20030605

• Ethidium probing of the parallel double- and four-stranded structures formed by the telomeric DNA sequences dG(GT)4G and d(GT)5.

  Journal of biomolecular structure & dynamics 20030601

• Genetics of familial amyloidotic polyneuropathy in a Hong Kong Chinese kindred.

  Acta neurologica Scandinavica 20030601

• Clinical features and genetic analysis of autosomal recessive hypercholesterolemia.

  The Journal of clinical endocrinology and metabolism 20030601

• UV photoprotection by combination topical antioxidants vitamin C and vitamin E.

  Journal of the American Academy of Dermatology 20030601

• Analysis of the TGF-beta1 promoter polymorphism (C-509T) in patients with chronic periodontitis.

  Journal of clinical periodontology 20030601

• Two pathogenic mutations in the mitochondrial DNA tRNA Leu(UUR) gene (T3258C and A3280G) resulting in variable clinical phenotypes.

  Neuromuscular disorders : NMD 20030601

• Quantification of UVR-induced DNA damage: global- versus gene-specific levels of thymine dimers.

  Journal of immunological methods 20030601

• Methylenetetrahydrofolate reductase (MTHFR) 677C>T and methionine synthase reductase (MTRR) 66A>G polymorphisms: association with serum homocysteine and angiographic coronary artery disease in the era of flour products fortified with folic acid.

  Atherosclerosis 20030601

• Structure and specificity of the vertebrate anti-mutator uracil-DNA glycosylase SMUG1.

  Molecular cell 20030601

• Is there additional effect of MTHFR C677T mutation on lipid abnormalities in renal allograft recipients?

  Transplantation proceedings 20030601

• New manzamine alkaloids with activity against infectious and tropical parasitic diseases from an Indonesian sponge.

  Journal of natural products 20030601

• Theoretical investigation of the triphosphate forms of azidothymidine and thymidine.

  Journal of biochemistry and molecular biology 20030531

• Synthesis and incorporation into PNA of fluorinated olefinic PNA (F-OPA) monomers.

  Organic letters 20030529

• Reversal of the apparent regiospecificity of NAD(P)H-dependent hydride transfer: the properties of the difluoromethylene group, a carbonyl mimic.

  Journal of the American Chemical Society 20030528

• The Gly-952 residue of Saccharomyces cerevisiae DNA polymerase alpha is important in discriminating correct deoxyribonucleotides from incorrect ones.

  The Journal of biological chemistry 20030523

• Dioxolane guanosine 5'-triphosphate, an alternative substrate inhibitor of wild-type and mutant HIV-1 reverse transcriptase. Steady state and pre-steady state kinetic analyses.

  The Journal of biological chemistry 20030523

• 8-Oxoguanine enhances bending of DNA that favors binding to glycosylases.

  Journal of the American Chemical Society 20030521

• Structural basis for feedback inhibition of the deoxyribonucleoside salvage pathway: studies of the Drosophila deoxyribonucleoside kinase.

  Biochemistry 20030520

• Absence of cyclin D2 expression is associated with promoter hypermethylation in gastric cancer.

  British journal of cancer 20030519

• DNA damage by ethylbenzenehydroperoxide formed from carcinogenic ethylbenzene by sunlight irradiation.

  Biochemical and biophysical research communications 20030516

• Endonuclease IV enhances base excision repair of endonuclease III from Methanobacterium thermoautotrophicum.

  DNA repair 20030513

• The novel DNA glycosylase, NEIL1, protects mammalian cells from radiation-mediated cell death.

  DNA repair 20030513

• Application of the nucleotidylyltransferase Ep toward the chemoenzymatic synthesis of dTDP-desosamine analogues.

  Chembiochem : a European journal of chemical biology 20030509

• Mammalian 5-formyluracil-DNA glycosylase. 1. Identification and characterization of a novel activity that releases 5-formyluracil from DNA.

  Biochemistry 20030506

• Minor groove site coordination of adenine by platinum group metal ions: effects on basicity, base pairing, and electronic structure.

  Inorganic chemistry 20030505

• Highly potent and selective inhibition of varicella-zoster virus replication by bicyclic furo[2,3-d]pyrimidine nucleoside analogues.

  Medicinal research reviews 20030501

• Interleukin-1 genotype and outcome of unrelated donor bone marrow transplantation.

  British journal of haematology 20030501

• Metabolic transformation of AZTp4A by Ap4A hydrolase regenerates AZT triphosphate.

  Antiviral research 20030501

• [Preliminary study on measurement of human fecundity applicability of time to pregnancy with Japanese subjects].

  [Nihon koshu eisei zasshi] Japanese journal of public health 20030501

• Cloning and sequence analysis of the spike gene of porcine epidemic diarrhea virus Chinju99.

  Virus genes 20030501

• Ntg1 and Ntg2 proteins as 5-formyluracil-DNA glycosylases/AP lyases in Saccharomyces cerevisiae.

  International journal of radiation biology 20030501

• Correlation between cardiac involvement and CTG repeat amplification in myotonic dystrophy type 1.

  Acta myologica : myopathies and cardiomyopathies : official journal of the Mediterranean Society of Myology 20030501

• Quantitative analysis and characterization of DNA immobilized on gold.

  Journal of the American Chemical Society 20030430

• Carcinogenic semicarbazide induces sequence-specific DNA damage through the generation of reactive oxygen species and the derived organic radicals.

  Mutation research 20030420

• BRAF mutation in papillary thyroid carcinoma.

  Journal of the National Cancer Institute 20030416

• Effects of the G protein beta 3-subunit gene C825T polymorphism: should hypotheses regarding the molecular mechanisms underlying enhanced G protein activation be revised? Focus on 'A splice variant of the G protein beta 3-subunit implicated in disease states does not modulate ion channels'.

  Physiological genomics 20030416

• Kinetic analysis of sequence-specific recognition of ssDNA by an autoantibody.

  Biochemistry 20030415

• RNA DNA discrimination by the antitermination protein NusB.

  Journal of molecular biology 20030411

• Molecular dynamics simulations of A. T-rich oligomers: sequence-specific binding of Na+ in the minor groove of B-DNA.

  Biopolymers 20030401

• Diagnosis of dihydropyrimidine dehydrogenase deficiency in a neonate with thymine-uraciluria.

  Hong Kong medical journal = Xianggang yi xue za zhi 20030401

• Investigation of IL4 gene polymorphism in individuals with different levels of chronic periodontitis in a Brazilian population.

  Journal of clinical periodontology 20030401

• Association study of the vitamin D: 1alpha-hydroxylase (CYP1alpha) gene and type 2 diabetes mellitus in a Polish population.

  Diabetes & metabolism 20030401

• Formation of the spore photoproduct and other dimeric lesions between adjacent pyrimidines in UVC-irradiated dry DNA.

  Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 20030401

• Leigh syndrome with cytochrome-c oxidase deficiency and a single T insertion nt 5537 in the mitochondrial tRNATrp gene.

  Neuropediatrics 20030401

• The analogue of thymidine triphosphate containing a methylene group in place of the 5' oxygen can serve as a substrate for reverse transcriptase.

  Nucleosides, nucleotides & nucleic acids 20030401

• Role of platelet-derived endothelial cell growth factor/thymidine phosphorylase in fluoropyrimidine sensitivity.

  British journal of cancer 20030324

• HU binding to bent DNA: a fluorescence resonance energy transfer and anisotropy study.

  Biochemistry 20030318

• The complex between a four-way DNA junction and T7 endonuclease I.

  The EMBO journal 20030317

• Potentiation of TRAIL-induced apoptosis in primary effusion lymphoma through azidothymidine-mediated inhibition of NF-kappa B.

  Blood 20030315

• The herpes simplex virus type 1 DNA polymerase processivity factor increases fidelity without altering pre-steady-state rate constants for polymerization or excision.

  The Journal of biological chemistry 20030314

• Mode of inhibition of short-patch base excision repair by thymine glycol within clustered DNA lesions.

  The Journal of biological chemistry 20030314

• Substrate specificity of human endonuclease III (hNTH1). Effect of human APE1 on hNTH1 activity.

  The Journal of biological chemistry 20030314

• Structures of human thymidylate kinase in complex with prodrugs: implications for the structure-based design of novel compounds.

  Biochemistry 20030311

• Oligonucleotides containing a new type of acyclic, achiral nucleoside analogue: 1-[3-hydroxy-2-(hydroxymethyl)prop-1-enyl]thymine.

  Bioorganic & medicinal chemistry letters 20030310

• The main role of human thymine-DNA glycosylase is removal of thymine produced by deamination of 5-methylcytosine and not removal of ethenocytosine.

  The Journal of biological chemistry 20030307

• Oligonucleotide-templated self-assembly of nucleotide bolaamphiphiles: DNA-like nanofibers edged by a double-helical arrangement of A-T base pairs.

  Angewandte Chemie (International ed. in English) 20030303

• Oligosymptomatic cornea verticillata in a heterozygote for Fabry disease: a novel mutation in the alpha-galactosidase gene.

  Cornea 20030301

• The methylentetrahydrofolate reductase C677T point mutation is a risk factor for vascular access thrombosis in hemodialysis patients.

  American journal of kidney diseases : the official journal of the National Kidney Foundation 20030301

• Na+ gradient-dependent transport of hypoxanthine by calf intestinal brush border membrane vesicles.

  Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology 20030301

• Erroneous incorporation of oxidized DNA precursors by Y-family DNA polymerases.

  EMBO reports 20030301

• Gas-phase theoretical prediction of the metal affinity of copper(I) ion for DNA and RNA bases.

  Journal of mass spectrometry : JMS 20030301

• Delayed repletion of O6-methylguanine-DNA methyltransferase resulting in failure to protect the human glioblastoma cell line SF767 from temozolomide-induced cytotoxicity.

  Journal of neurosurgery 20030301

• Disposition and oral bioavailability in rats of an antiviral and antitumor amino acid phosphoramidate prodrug of AZT-monophosphate.

  Pharmaceutical research 20030301

• Investigation of postjunctional alpha1- and alpha2-adrenoceptor subtypes in vas deferens from wild-type and alpha(2A/D)-adrenoceptor knockout mice.

  British journal of pharmacology 20030301

• Significance of dihydropyrimidine dehydrogenase activity in renal cell carcinoma.

  European journal of cancer (Oxford, England : 1990) 20030301

• Stacking conformation of 9-[omega-(thymin-1-yl)alkyl]adenine in aqueous solution.

  Nucleosides, nucleotides & nucleic acids 20030301

• Angiotensin II-acetylcholine noncovalent complexes analyzed with MALDI-ion mobility-TOF MS.

  Journal of biomolecular techniques : JBT 20030301

• Isolation and characterization of bluensomycin biosynthetic genes from Streptomyces bluensis.

  FEMS microbiology letters 20030227

• Reactivity of substituted charged phenyl radicals toward components of nucleic acids.

  Journal of the American Chemical Society 20030226

• Redox active macrocyclic receptors for neutral guests.

  Inorganic chemistry 20030224

• Synthesis of purine- and pyrimidine-substituted heptadienes. The stereochemistry of cyclization and cyclopolymerization products.

  The Journal of organic chemistry 20030221

• 'Action-at-a distance' of a new DNA oxidative damage product 6-furfuryl-adenine (kinetin) on template properties of modified DNA.

  Biochimica et biophysica acta 20030220

• Comprehensive model for allosteric regulation of mammalian ribonucleotide reductase: refinements and consequences.

  Biochemistry 20030218

• Translesion synthesis past platinum DNA adducts by human DNA polymerase mu.

  Biochemistry 20030218

• Disruption of a novel regulatory element in the erythroid-specific promoter of the human PKLR gene causes severe pyruvate kinase deficiency.

  Blood 20030215

• Enzymatic and structural analysis of inhibitors designed against Mycobacterium tuberculosis thymidylate kinase. New insights into the phosphoryl transfer mechanism.

  The Journal of biological chemistry 20030214

• Rapid disappearance of deoxyribose-1-phosphate in platelet derived endothelial cell growth factor/thymidine phosphorylase overexpressing cells.

  Biochemical and biophysical research communications 20030214

• Temozolomide induces apoptosis and senescence in glioma cells cultured as multicellular spheroids.

  British journal of cancer 20030210

• Structure of a G-quadruplex-ligand complex.

  Journal of molecular biology 20030207

• Highly efficient recognition of native TpT by artificial ditopic hydrogen-bonding receptors possessing a conformationally well-defined linkage.

  The Journal of organic chemistry 20030207

• An expeditious and efficient procedure for the synthesis of unsaturated acyclonucleosides of Z configuration related to D4T.

  The Journal of organic chemistry 20030207

• The pathogenic A3243G mutation in human mitochondrial tRNALeu(UUR) decreases the efficiency of aminoacylation.

  Biochemistry 20030204

• Repair of the mutagenic DNA oxidation product, 5-formyluracil.

  DNA repair 20030203

• Neighbouring bases in template influence base-pairing of isoguanine.

  The Biochemical journal 20030201

• Interaction of cyclic cytosine-, guanine-, thymine-, uracil- and mixed guanine-cytosine base tetrads with K+, Na+ and Li+ ions -- a density functional study.

  Journal of biomolecular structure & dynamics 20030201

• Thallium-DNA complexes in aqueous solution. Major or minor groove binding.

  Journal of biomolecular structure & dynamics 20030201

• In situ hybridization AT-tailing with catalyzed signal amplification for sensitive and specific in situ detection of human immunodeficiency virus-1 mRNA in formalin-fixed and paraffin-embedded tissues.

  The American journal of pathology 20030201

• Frequency distribution of C3435T mutation in exon 26 of the MDR1 gene in a Spanish population.

  Therapeutic drug monitoring 20030201

• The thermodynamic contribution of the 5-methyl group of thymine in the two- and three-stranded complexes formed by poly(dU) and poly(dT) with poly(dA).

  Biopolymers 20030201

• Association of the CD14 gene -159C polymorphism with progression of IgA nephropathy.

  Journal of medical genetics 20030201

• Methylenetetrahydrofolate reductase 677 C-->T polymorphism and risk of proximal colon cancer in north Italy.

  Clinical cancer research : an official journal of the American Association for Cancer Research 20030201

• Gas-phase conformations of deprotonated trinucleotides (dGTT-, dTGT-, and dTTG-): the question of zwitterion formation.

  Journal of the American Society for Mass Spectrometry 20030201

• Deuterium isotope effects and fractionation factors of hydrogen-bonded A:T base pairs of DNA.

  Journal of biomolecular NMR 20030201

• [Isolation of MPB63 in the culture fluid of Mycobacterium bovis BCG Tokyo: genetical and immunological characterization].

  Kekkaku : [Tuberculosis] 20030201

• Genomes at the interface between bacteria and organelles.

  Philosophical transactions of the Royal Society of London. Series B, Biological sciences 20030129

• Evolution of the chloroplast genome.

  Philosophical transactions of the Royal Society of London. Series B, Biological sciences 20030129

• Formation of a methide derivative upon photolysis of thymidine bromohydrins.

  The Journal of organic chemistry 20030124

• Features in short guanine-rich sequences that stimulate DNA polymerization in vitro.

  Biochemistry 20030121

• Methylphosphonate LNA: a locked nucleic acid with a methylphosphonate linkage.

  Bioorganic & medicinal chemistry letters 20030120

• Macrolide-resistant pneumococcal endocarditis and epidural abscess that develop during erythromycin therapy.

  Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 20030115

• Effect of a modified thymine on the structure and stability of [d(TGGGT)]4 quadruplex.

  International journal of biological macromolecules 20030115

• Mutational analysis of a sequence-specific ssDNA binding lupus autoantibody.

  Biochemistry 20030114

• A new and efficient strategy for the synthesis of shimofuridin analogs: 2'-O-(4-O-stearoyl-alpha-L-fucopyranosyl)thymidine and -uridine.

  Carbohydrate research 20030102

• Xeroderma pigmentosum group C protein interacts physically and functionally with thymine DNA glycosylase.

  The EMBO journal 20030102

• Kinetics and binding of the thymine-DNA mismatch glycosylase, Mig-Mth, with mismatch-containing DNA substrates.

  DNA repair 20030102

• Mutation analysis of K-ras and beta-catenin genes related to O6-methylguanin-DNA methyltransferase and mismatch repair protein status in human gallbladder carcinoma.

  International journal of molecular medicine 20030101

• Precore and core promoter mutations of hepatitis B virus and hepatitis B e antigen-negative chronic hepatitis B in Korea.

  Journal of hepatology 20030101

• Yeast DNA polymerase zeta (zeta) is essential for error-free replication past thymine glycol.

  Genes & development 20030101

• Estrogen receptor thymine-adenine dinucleotide repeat polymorphism is associated with susceptibility to leiomyoma.

  Fertility and sterility 20030101

• Binding of actinomycin D to single-stranded DNA of sequence motifs d(TGTCT(n)G) and d(TGT(n)GTCT).

  Biophysical journal 20030101

• Contrasting associations between aldosterone synthase gene polymorphisms and essential hypertension in blacks and in whites.

  Journal of hypertension 20030101

• Implications of a RAD54L polymorphism (2290C/T) in human meningiomas as a risk factor and/or a genetic marker.

  BMC cancer 20030101

• Cloning and nucleotide analysis of segment A gene of infectious bursal disease virus detected in Korea.

  Virus genes 20030101

• Synthesis and HIV-1 reverse transcriptase inhibitor activity of some 2,5,6-substituted benzoxazole, benzimidazole, benzothiazole and oxazolo(4,5-b)pyridine derivatives.

  Arzneimittel-Forschung 20030101

• [Compositae dermatitis].

  Medicinski pregled 20030101

• C766T low-density lipoprotein receptor-related protein 1 (LRP1) gene polymorphism and susceptibility to breast cancer.

  Breast cancer research : BCR 20030101

• Functional expression of a sodium dependent nucleoside transporter on rabbit cornea: Role in corneal permeation of acyclovir and idoxuridine.

  Current eye research 20030101

• [DNA duplexes containing 2'-deoxy-2'-iodoacetamidouridine as reagents for affinity modification of proteins].

  Molekuliarnaia biologiia 20030101

• Cathepsin D polymorphism in Italian elderly subjects with sporadic late-onset Alzheimer's disease.

  Dementia and geriatric cognitive disorders 20030101

• Recognition of thymine by triazine fluorescent probe through intermolecular multiple hydrogen bonding.

  Biopolymers 20030101

• Chemical and photolytical transformation of biomedically significant compounds in the presence of deuterated solvents.

  Journal of photochemistry and photobiology. B, Biology 20030101

• Neural networks: Accurate nonlinear QSAR model for HEPT derivatives.

  Journal of chemical information and computer sciences 20030101

• Comparative QSAR based on neural networks for the anti-HIV activity of HEPT derivatives.

  Current pharmaceutical design 20030101

• Particle beam glow discharge mass spectrometry: spectral characteristics of nucleobases.

  Rapid communications in mass spectrometry : RCM 20030101

• UV-absorbing substance in the red alga Porphyra yezoensis (Bangiales, Rhodophyta) block thymine photodimer production.

  Marine biotechnology (New York, N.Y.) 20030101

• Induction of thymidine phosphorylase expression and enhancement of Furtulon sensitivity by Taxol in a human ovarian carcinoma cell line.

  Anticancer research 20030101

• Enhanced epidermal ultraviolet responses in chronically sun-exposed skin are dependent on previous sun exposure.

  Acta dermato-venereologica 20030101

• CblE type of homocystinuria: mild clinical phenotype in two patients homozygous for a novel mutation in the MTRR gene.

  Journal of inherited metabolic disease 20030101

• Relationship of SARS-CoV to other pathogenic RNA viruses explored by tetranucleotide usage profiling.

  BMC bioinformatics 20030101

• Anti-HIV activity of HEPT, TIBO, and cyclic urea derivatives: structure-property studies, focused combinatorial library generation, and hits selection using substructural molecular fragments method.

  Journal of chemical information and computer sciences 20030101

• Syntheses and structural studies of calix[4]arene-nucleoside and calix[4]arene-oligonucleotide hybrids.

  Nucleic acids research. Supplement (2001) 20030101

• Synthesis of antisense oligonucleotides containing photocleavable protecting groups on the thymine bases and their photoinduced duplex formation.

  Nucleic acids research. Supplement (2001) 20030101

• 2,6-Diaminonaphthyridine derivatives bind to a single nucleotide bulge in DNA.

  Nucleic acids research. Supplement (2001) 20030101

• Deoxyribozymes that catalyze photochemistry: cofactor-dependent and -independent photorepair of thymine dimers.

  Nucleic acids research. Supplement (2001) 20030101

• Highly selective binding of metal ions to thymine-thymine and cytosine-cytosine base pairs in DNA duplexes.

  Nucleic acids research. Supplement (2001) 20030101

• Identification and characterization of mammalian 5-formyluracil-DNA glycosylase.

  Nucleic acids research. Supplement (2001) 20030101

• Protein binding to expanded telomere repeats in Tetrahymena thermophila.

  The Journal of eukaryotic microbiology 20030101

• Pyrazolo[3,4-d]pyrimidine nucleic acids: adjustment of the dA-dT to the dG-dC base pair stability.

  Nucleosides, nucleotides & nucleic acids 20030101

• Synthesis of thymine derivatives of 4-hydroxyvaline.

  Nucleosides, nucleotides & nucleic acids 20030101

• Synthesis and biological evaluation of pyrimidine nucleosides fused with 3',4'-tetrahydrofuran ring.

  Nucleosides, nucleotides & nucleic acids 20030101

• Novel nucleotide analogues as potential substrates for TMPK, a key enzyme in the metabolism of AZT.

  Nucleosides, nucleotides & nucleic acids 20030101

• d4TMP delivery from 7-substituted cycloSal-d4TMPs.

  Nucleosides, nucleotides & nucleic acids 20030101

• SATE (aryl) phosphotriester series. I. Synthesis and biological evaluation.

  Nucleosides, nucleotides & nucleic acids 20030101

• SATE (aryl) phosphotriester series. II. Stability studies and physicochemical parameters.

  Nucleosides, nucleotides & nucleic acids 20030101

• Towards new thymidine phosphorylase/PD-ECGF inhibitors based on the transition state of the enzyme reaction.

  Nucleosides, nucleotides & nucleic acids 20030101

• Novel base-labile protecting groups for 5'-hydroxy function in solid-phase oligonucleotide synthesis.

  Nucleosides, nucleotides & nucleic acids 20030101

• Pyrrolidine PNA-DNA chimeric oligonucleotides with extended backbone.

  Nucleosides, nucleotides & nucleic acids 20030101

• xylo-configured oligonucleotides (XNA, xylo nucleic acids): synthesis and hybridization studies.

  Nucleosides, nucleotides & nucleic acids 20030101

• Fluorinated peptide nucleic acid.

  Nucleosides, nucleotides & nucleic acids 20030101

• Synthesis of a cyclopentane amide DNA analogue and its base pairing properties.

  Nucleosides, nucleotides & nucleic acids 20030101

• Olefinic peptide nucleic acid (OPA).

  Nucleosides, nucleotides & nucleic acids 20030101

• Synthesis and triplex binding properties of oligonucleotides containing a novel nucleobase.

  Nucleosides, nucleotides & nucleic acids 20030101

• Synthesis of trans-L/D-2-(tert-butoxycarbonyl-aminomethyl)-4-(thymin-1-yl) pyrrolidin-1-yl acetic acid.

  Nucleosides, nucleotides & nucleic acids 20030101

• A novel PNA-monomer for recognition of thymine in triple-helix structures.

  Nucleosides, nucleotides & nucleic acids 20030101

• Synthesis and properties of oligonucleotide chimeras containing 5'-amino-2'-deoxy-2'-fluoroarabinonucleosides.

  Nucleosides, nucleotides & nucleic acids 20030101

• Alpha-cycloPNA: 1-aminocylopentane-1-carboxylic acid-derived peptide nucleic acid.

  Nucleosides, nucleotides & nucleic acids 20030101

• Inhibition of vertebrate telomerases by the triphosphate derivatives of some biologically active nucleosides.

  Nucleosides, nucleotides & nucleic acids 20030101

• 1H-NMR study of the quadruplex [d(TGGGT)]4 containing a modified thymine.

  Nucleosides, nucleotides & nucleic acids 20030101

• Extending knowledge of Escherichia coli metabolism by modeling and experiment.

  Genome biology 20030101

• Thrombophilia and pregnancy.

  Reproductive biology and endocrinology : RB&E 20030101

• Radiofrequency exposure and mammalian cell toxicity, genotoxicity, and transformation.

  Bioelectromagnetics 20030101

• Association of p53 codon Arg72Pro and p73 G4C14-to-A4T14 at exon 2 genetic polymorphisms with the risk of Japanese breast cancer.

  Breast cancer (Tokyo, Japan) 20030101

• Homozygous C677T mutation in the MTHFR gene as an independent risk factor for multiple small-artery occlusions.

  Thrombosis research 20030101

• Application of the C4'-alkylated deoxyribose primer system (CAPS) in allele-specific real-time PCR for increased selectivity in discrimination of single nucleotide sequence variants.

  Biological chemistry 20030101

• Targeted molecular imaging.

  Korean journal of radiology 20030101

• Photopheresis. Therapeutic potential in preventing restenosis after percutaneous transluminal coronary angioplasty.

  American journal of cardiovascular drugs : drugs, devices, and other interventions 20030101

• combination of vascular endothelial growth factor (VEGF) and thymidine phosphorylase (TP) to improve angiogenic gene therapy.

  Angiogenesis 20030101

• Cysticercosis/taeniasis: recent advances in serological and molecular diagnoses.

  The Southeast Asian journal of tropical medicine and public health 20030101

• Repair of dihydrouracil supported by base excision repair in mNTH1 knock-out cell extracts.

  The Journal of biological chemistry 20021227

• Specific interactions of complementary mono- and multivalent guests with recognition-induced polymersomes.

  Journal of the American Chemical Society 20021225

• Uracil in DNA--occurrence, consequences and repair.

  Oncogene 20021216

• Direct isolation of purines and pyrimidines from nucleic acids using sublimation.

  Analytical chemistry 20021215

• UV stimulation of nucleophosmin/B23 expression is an immediate-early gene response induced by damaged DNA.

  The Journal of biological chemistry 20021213

• Template-assisted preferential formation of a syn photodimer in a pyrophosphate-induced self-assembly of a thymine-functionalized isothiouronium receptor.

  Organic letters 20021212

• PTEN/MMAC1 expression in melanoma resection specimens.

  British journal of cancer 20021202

• Structures of HIV-1 reverse transcriptase with pre- and post-translocation AZTMP-terminated DNA.

  The EMBO journal 20021202

• Polymerization on solid supports.

  Angewandte Chemie (International ed. in English) 20021202

• Oxidative DNA damage by a common metabolite of carcinogenic nitrofluorene and N-acetylaminofluorene.

  International journal of cancer 20021201

• Structural basis for uracil recognition by archaeal family B DNA polymerases.

  Nature structural biology 20021201

• Matrix analysis for the dissection of interactions of G-protein beta3 subunit C825T genotype, allograft function, and posttransplant hypertension in kidney transplantation.

  American journal of kidney diseases : the official journal of the National Kidney Foundation 20021201

• Influence of local duplex stability and N6-methyladenine on uracil recognition by mismatch-specific uracil-DNA glycosylase (Mug).

  Chemical research in toxicology 20021201

• PvuII-endonuclease induces structural alterations at the scissile phosphate group of its cognate DNA.

  Journal of molecular biology 20021129

• Synthesis, incorporation into triplex-forming oligonucleotide, and binding properties of a novel 2'-deoxy-C-nucleoside featuring a 6-(thiazolyl-5)benzimidazole nucleobase.

  Organic letters 20021128

• Synthesis of chiral chromium tricarbonyl labeled thymine PNA monomers via the Ugi reaction.

  Organic letters 20021128

• Efficient interstrand excess electron transfer in PNA:DNA hybrids.

  Journal of the American Chemical Society 20021127

• LNAzymes: incorporation of LNA-type monomers into DNAzymes markedly increases RNA cleavage.

  Journal of the American Chemical Society 20021120

• Pyrazolylborate-zinc-nucleobase-complexes, 2:(1) preparations and structures of Tp(Cum,Me)Zn and Tp(Ph,Me)Zn complexes.

  Inorganic chemistry 20021118

• Crystal structure of Escherichia coli glucose-1-phosphate thymidylyltransferase (RffH) complexed with dTTP and Mg2+.

  The Journal of biological chemistry 20021115

• Kinetic pathway of dTTP hydrolysis by hexameric T7 helicase-primase in the absence of DNA.

  The Journal of biological chemistry 20021115

• Subtype- and species-specific knockdown of PKC using short interfering RNA.

  Biochemical and biophysical research communications 20021115

• Thymidine 3',5'-diphosphoric acid derived cations and radicals: ab initio study.

  Organic letters 20021114

• Organization of microcrystals on glass by adenine-thymine hydrogen bonding.

  Journal of the American Chemical Society 20021113

• Role of base flipping in specific recognition of damaged DNA by repair enzymes.

  Journal of molecular biology 20021108

• Far-infrared vibrational modes of DNA components studied by terahertz time-domain spectroscopy.

  Physics in medicine and biology 20021107

• Intrinsic lifetimes of the excited state of DNA and RNA bases.

  Journal of the American Chemical Society 20021106

• 2-Aminopurine electronic structure and fluorescence properties in DNA.

  Biochemistry 20021105

• Site-specific labeling of supercoiled DNA at the A+T rich sequences.

  Biochemistry 20021105

• Electron injection into DNA: synthesis and spectroscopic properties of pyrenyl-modified oligonucleotides.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20021104

• The molecular mechanism of multidrug resistance by the Q151M human immunodeficiency virus type 1 reverse transcriptase and its suppression using alpha-boranophosphate nucleotide analogues.

  The Journal of biological chemistry 20021101

• Weak strand displacement activity enables human DNA polymerase beta to expand CAG/CTG triplet repeats at strand breaks.

  The Journal of biological chemistry 20021101

• A back-up glycosylase in Nth1 knock-out mice is a functional Nei (endonuclease VIII) homologue.

  The Journal of biological chemistry 20021101

• Role of C-terminal region of Staphylococcal nuclease for foldability, stability, and activity.

  Proteins 20021101

• Development of a pharmacodynamic model for HIV treatment with nucleoside reverse transcriptase and protease inhibitors.

  Antiviral research 20021101

• A novel homozygous missense mutation in the myotubularin-related protein 2 gene associated with recessive Charcot-Marie-Tooth disease with irregularly folded myelin sheaths.

  Neuromuscular disorders : NMD 20021101

• Association of (-)786T-C mutation of endothelial nitric oxide synthase gene with insulin resistance.

  Diabetologia 20021101

• Effect of sunscreen application on UV-induced thymine dimers.

  Archives of dermatology 20021101

• Excess dNTPs minimize RNA hydrolysis during reverse transcription.

  BioTechniques 20021101

• Epidermal reconstructs: a new tool to study topical and systemic photoprotective molecules.

  Journal of photochemistry and photobiology. B, Biology 20021101

• Hb Rampa [alpha 95(G2)pro-->Ser (alpha 2)] in a family of European ancestry: DNA analysis confirms the CCG-->TCG mutation at codon 95 of the alpha 2-globin gene; clinical and laboratory features.

  Hemoglobin 20021101

• Adhesive properties of hepatoma cells to collagen IV coated surfaces.

  Hepatobiliary & pancreatic diseases international : HBPD INT 20021101

• Suppression of UVC-induced cell damage and enhancement of DNA repair by the fermented milk, Kefir.

  Cytotechnology 20021101

• On the origin of p53 G:C --> T:A transversions in lung cancers.

  Mutation research 20021031

• Neighboring base identity affects N-ethyl-N-nitrosourea-induced mutagenesis in Escherichia coli.

  Mutation research 20021031

• Using 2-aminopurine fluorescence to measure incorporation of incorrect nucleotides by wild type and mutant bacteriophage T4 DNA polymerases.

  The Journal of biological chemistry 20021025

• Human DNA polymerase kappa bypasses and extends beyond thymine glycols during translesion synthesis in vitro, preferentially incorporating correct nucleotides.

  The Journal of biological chemistry 20021004

• Evidence for 'unseen' transposase--DNA contacts.

  Journal of molecular biology 20021004

• cycloSal-d4TMP pronucleotides structural variations, mechanistic insights and antiviral activity.

  Current topics in medicinal chemistry 20021001

• Evidence for a spontaneous C1840-T mutation in the RYR1 gene after DNA fingerprinting in a malignant hyperthermia susceptible family.

  Naunyn-Schmiedeberg's archives of pharmacology 20021001

• J-binding protein increases the level and retention of the unusual base J in trypanosome DNA.

  Molecular microbiology 20021001

• Splicing of the maize Sh1 first intron is essential for enhancement of gene expression, and a T-rich motif increases expression without affecting splicing.

  Plant physiology 20021001

• Heme oxygenase-1 gene promoter polymorphism is associated with coronary artery disease in Japanese patients with coronary risk factors.

  Arteriosclerosis, thrombosis, and vascular biology 20021001

• Mutations in the 23S rRNA gene of Helicobacter pylori associated with clarithromycin resistance.

  Journal of Korean medical science 20021001

• Teleost introns are characterized by a high A+T content.

  Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology 20021001

• Fragmentation of deprotonated ions of oligodeoxynucleotides carrying a 5-formyluracil or 2-aminoimidazolone.

  Journal of the American Society for Mass Spectrometry 20021001

• H-NMR studies of duplex DNA decamer containing a uracil cyclobutane dimer: implications regarding the high UV mutagenecity of CC photolesions.

  Photochemistry and photobiology 20021001

• QSAR for anti-HIV activity of HEPT derivatives.

  SAR and QSAR in environmental research 20021001

• Thermal desorption behavior and binding properties of DNA bases and nucleosides on gold.

  Journal of the American Chemical Society 20020925

• Dynamics of electron injection in DNA hairpins.

  Journal of the American Chemical Society 20020925

• Charge transfer through DNA triggered by site selective charge injection into adenine.

  Chemical communications (Cambridge, England) 20020921

• Use of 2-aminopurine and tryptophan fluorescence as probes in kinetic analyses of DNA polymerase beta.

  Biochemistry 20020917

• Informatics. The genome chose its alphabet with care.

  Science (New York, N.Y.) 20020913

• Acyclic nucleoside analogues as novel inhibitors of human mitochondrial thymidine kinase.

  Journal of medicinal chemistry 20020912

• Insulin-like growth factor-1-mediated AKT activation postpones the onset of ultraviolet B-induced apoptosis, providing more time for cyclobutane thymine dimer removal in primary human keratinocytes.

  The Journal of biological chemistry 20020906

• Thymidine phosphorylase expression in oral squamous cell carcinoma.

  Oral oncology 20020901

• Exposure to UV light causes increased biotinylation of histones in Jurkat cells.

  American journal of physiology. Cell physiology 20020901

• High frequency of matrix attachment regions and cut-like protein x/CCAAT-displacement protein and B cell regulator of IgH transcription binding sites flanking Ig V region genes.

  Journal of immunology (Baltimore, Md. : 1950) 20020901

• A strong effect of AT mutational bias on amino acid usage in Buchnera is mitigated at high-expression genes.

  Molecular biology and evolution 20020901

• The extent of nucleotide polymorphism is highly variable across a 3-kb region on Plasmodium falciparum chromosome 2.

  Molecular biology and evolution 20020901

• 5-Methyl-2-thiouracil.

  Acta crystallographica. Section C, Crystal structure communications 20020901

• Metabolism of carcinogenic urethane to nitric oxide is involved in oxidative DNA damage.

  Free radical biology & medicine 20020901

• Novel neuropeptide Y1 and Y5 receptor gene variants: associations with serum triglyceride and high-density lipoprotein cholesterol levels.

  Clinical genetics 20020901

• Screening and diagnosis of beta-ureidopropionase deficiency by gas chromatographic/mass spectrometric analysis of urine.

  Journal of mass spectrometry : JMS 20020901

• Structural requirements of the mRNA for intracistronic translation initiation of the enterobacterial infB gene.

  Genes to cells : devoted to molecular & cellular mechanisms 20020901

• A study of fast and metastable dissociations of adenine-thymine binary-base oligonucleotides by using positive-ion MALDI-TOF mass spectrometry.

  Journal of the American Society for Mass Spectrometry 20020901

• [Effect of mutations for the ruvABC genes on recombination between direct DNA repairs in Escherichia coli strains carrying extended tandem duplication].

  Genetika 20020901

• Effects of hydrogen bonding within a damaged base pair on the activity of wild type and DNA-intercalating mutants of human alkyladenine DNA glycosylase.

  The Journal of biological chemistry 20020830

• Loss of oxidized and chlorinated bases in DNA treated with reactive oxygen species: implications for assessment of oxidative damage in vivo.

  Biochemical and biophysical research communications 20020830

• T7 DNA helicase: a molecular motor that processively and unidirectionally translocates along single-stranded DNA.

  Journal of molecular biology 20020830

• Identification and characterization of a novel human DNA glycosylase for repair of cytosine-derived lesions.

  The Journal of biological chemistry 20020823

• A highly effective nonpolar isostere of deoxyguanosine: synthesis, structure, stacking, and base pairing.

  The Journal of organic chemistry 20020823

• Stereoselective synthesis of the beta-anomer of 4'-thionucleosides based on electrophilic glycosidation to 4-thiofuranoid glycals.

  The Journal of organic chemistry 20020823

• Nucleophilic addition of benzenethiol to 1',2'-unsaturated nucleosides: 1'-C-phenylthio-2'-deoxynucleosides as anomeric radical precursors.

  The Journal of organic chemistry 20020823

• Development of a direct assay for measuring intracellular AZT triphosphate in humans peripheral blood mononuclear cells.

  Analytical chemistry 20020815

• RecQ helicases and genome stability: lessons from model organisms and human disease.

  Swiss medical weekly 20020810

• The influence of the thymine C5 methyl group on spontaneous base pair breathing in DNA.

  The Journal of biological chemistry 20020809

• Base excision repair and nucleotide excision repair contribute to the removal of N-methylpurines from active genes.

  DNA repair 20020806

• Base pairing properties of 8-oxo-7,8-dihydroadenosine in cDNA synthesis by reverse transcriptases.

  Bioorganic & medicinal chemistry letters 20020805

• Site-specific interactions of JBP with base and sugar moieties in duplex J-DNA. Evidence for both major and minor groove contacts.

  The Journal of biological chemistry 20020802

• Development and characterization of a monoclonal antibody with cross-reactivity towards uracil and thymine, and its potential use in screening patients treated with 5-fluorouracil for possible risks.

  Clinica chimica acta; international journal of clinical chemistry 20020801

• Ribonucleotide reductase and thymidine phosphorylation: two potential targets of azodicarbonamide.

  Biochemical pharmacology 20020801

• Substrate recognition by a family of uracil-DNA glycosylases: UNG, MUG, and TDG.

  Chemical research in toxicology 20020801

• Identification of a single nucleotide polymorphism showing no insulin-mediated suppression of the promoter activity in the human insulin receptor substrate 2 gene.

  Diabetologia 20020801

• DNA repair in resistance to alkylating anticancer drugs.

  International journal of clinical pharmacology and therapeutics 20020801

• Development of a transformation system for the flavinogenic yeast Candida famata.

  FEMS yeast research 20020801

• The solution structure of d(G(4)T(4)G(3))(2): a bimolecular G-quadruplex with a novel fold.

  Journal of molecular biology 20020726

• Depleted uranium-catalyzed oxidative DNA damage: absence of significant alpha particle decay.

  Journal of inorganic biochemistry 20020725

• Substrate specificity and sequence preference of G:T mismatch repair: incision at G:T, O6-methylguanine:T, and G:U mispairs in DNA by human cell extracts.

  Biochemistry 20020723

• Surface modification via 'lock and key' specific self-assembly of polyhedral oligomeric silsequioxane (POSS) derivatives to modified gold surfaces.

  Chemical communications (Cambridge, England) 20020721

• Enhanced CpG mutability and tumorigenesis in MBD4-deficient mice.

  Science (New York, N.Y.) 20020719

• Binding efficiency and transport properties of molecularly imprinted polymer thin films.

  Journal of the American Chemical Society 20020717

• A novel human DNA glycosylase that removes oxidative DNA damage and is homologous to Escherichia coli endonuclease VIII.

  DNA repair 20020717

• Embryonic extracts derived from the nematode Caenorhabditis elegans remove uracil from DNA by the sequential action of uracil-DNA glycosylase and AP (apurinic/apyrimidinic) endonuclease.

  The Biochemical journal 20020715

• Functional and molecular characterization of nucleobase transport by recombinant human and rat equilibrative nucleoside transporters 1 and 2. Chimeric constructs reveal a role for the ENT2 helix 5-6 region in nucleobase translocation.

  The Journal of biological chemistry 20020712

• RNA hairpin invasion and ribosome elongation arrest by mixed base PNA oligomer.

  Journal of molecular biology 20020712

• Thymidine phosphorylase suppresses Fas-induced apoptotic signal transduction independent of its enzymatic activity.

  Biochemical and biophysical research communications 20020712

• Crystal structure of the potassium form of an Oxytricha nova G-quadruplex.

  Journal of molecular biology 20020705

• Purification, crystallization and preliminary structural studies of dTDP-4-keto-6-deoxy-glucose-5-epimerase (EvaD) from Amycolatopsis orientalis, the fourth enzyme in the dTDP-L-epivancosamine biosynthetic pathway.

  Acta crystallographica. Section D, Biological crystallography 20020701

• Paradoxical expression of cell cycle inhibitor p27 in endometrioid adenocarcinoma of the uterine corpus - correlation with proliferation and clinicopathological parameters.

  British journal of cancer 20020701

• Biological consequences of free radical-damaged DNA bases.

  Free radical biology & medicine 20020701

• Novel nuclear and mitochondrial glycosylases revealed by disruption of the mouse Nth1 gene encoding an endonuclease III homolog for repair of thymine glycols.

  The EMBO journal 20020701

• Clustering of nucleobases with alkali metals studied by electrospray ionization tandem mass spectrometry: implications for mechanisms of multistrand DNA stabilization.

  Journal of mass spectrometry : JMS 20020701

• Antimicrobial DNA-binding photosensitizers from the common rush, Juncus effusus.

  Photochemistry and photobiology 20020701

• A single thymine nucleotide deletion responsible for congenital deficiency of plasmin inhibitor.

  Thrombosis and haemostasis 20020701

• Solution structure of a DNA duplex containing a formamide-adenine base pair.

  Canadian journal of physiology and pharmacology 20020701

• Investigation of an IL-2 polymorphism in patients with different levels of chronic periodontitis.

  Journal of clinical periodontology 20020701

• [Determination of the base contents of liver DNA of rats by reversed-phase high performance liquid chromatography].

  Se pu = Chinese journal of chromatography 20020701

• Stereoselective synthesis of novel types of cyclopropyl carbocyclic nucleosides containing quaternary stereogenic centers.

  The Journal of organic chemistry 20020628

• Endogenous DNA lesions can inhibit the binding of the AP-1 (c-Jun) transcription factor.

  Biochemistry 20020625

• Substitutions of Phe61 located in the vicinity of template 5'-overhang influence polymerase fidelity and nucleoside analog sensitivity of HIV-1 reverse transcriptase.

  The Journal of biological chemistry 20020621

• Excision of 8-methylguanine site-specifically incorporated into oligonucleotide substrates by the AlkA protein of Escherichia coli.

  DNA repair 20020621

• Determination of laser-induced thymine-thymine dimer in DNA by LC.

  Journal of pharmaceutical and biomedical analysis 20020620

• The role of surface-exposed lysines in wrapping DNA about the bacterial histone-like protein HU.

  Biochemistry 20020618

• Asymmetric synthesis of 4'-ethoxy-2',3'-didehydro-2',3'-dideoxynucleosides by palladium-catalyzed kinetic discrimination between the corresponding diastereoisomeric lactol acetates.

  The Journal of organic chemistry 20020614

• Mouse aquaporin 10 gene (AQP10) is a pseudogene.

  Biochemical and biophysical research communications 20020614

• Synergistic induction of the senescence-associated genes by 5-bromodeoxyuridine and AT-binding ligands in HeLa cells.

  Experimental cell research 20020610

• Loss of Hoogsteen pairing ability upon N1 adenine platinum binding.

  Inorganic chemistry 20020603

• A novel mutant allele of the CYP2A6 gene (CYP2A6*11 ) found in a cancer patient who showed poor metabolic phenotype towards tegafur.

  Pharmacogenetics 20020601

• Shear stress induces expression of vascular endothelial growth factor receptor Flk-1/KDR through the CT-rich Sp1 binding site.

  Arteriosclerosis, thrombosis, and vascular biology 20020601

• Application of a colorimetric chain-termination assay for characterization of reverse transcriptase from 3'-azido-2',3'-deoxythymidine-resistant HIV isolates.

  Biotechnology and applied biochemistry 20020601

• Profiling DNA methylation by melting analysis.

  Methods (San Diego, Calif.) 20020601

• Enhanced analysis of purine and pyrimidine bases by the use of double-strand polyaniline coatings in micellar electrokinetic capillary chromatography.

  Electrophoresis 20020601

• A rapid phenotypic assay for detecting multiple nucleoside analogue reverse transcriptase inhibitor-resistant HIV-1 in plasma.

  Antiviral therapy 20020601

• Inhibition of gamma-radiation induced DNA damage in plasmid pBR322 by TMG, a water-soluble derivative of vitamin E.

  Journal of radiation research 20020601

• Condensation of nucleobases at mercury/aqueous solution interface--a structural perspective using hydrogen bonding considerations.

  Journal of colloid and interface science 20020601

• Locked nucleic acid (LNA) recognition of RNA: NMR solution structures of LNA:RNA hybrids.

  Journal of the American Chemical Society 20020529

• Structural differences in the NOE-derived structure of G-T mismatched DNA relative to normal DNA are correlated with differences in (13)C relaxation-based internal dynamics.

  Journal of molecular biology 20020524

• 5-Methyldeoxycytidine monophosphate deaminase and 5-methylcytidyl-DNA deaminase activities are present in human mature sperm cells.

  FEBS letters 20020522

• The A167Y mutation converts the herpes simplex virus type 1 thymidine kinase into a guanosine analogue kinase.

  Biochemistry 20020521

• Weak distance dependence of excess electron transfer in DNA.

  Angewandte Chemie (International ed. in English) 20020517

• Novel disease-causing mutations in the dihydropyrimidine dehydrogenase gene interpreted by analysis of the three-dimensional protein structure.

  The Biochemical journal 20020515

• Suppression of thymidine phosphorylase-mediated angiogenesis and tumor growth by 2-deoxy-L-ribose.

  Cancer research 20020515

• Translesion synthesis by human DNA polymerase eta across thymine glycol lesions.

  Biochemistry 20020514

• Pre-existing distortions in nucleic acid structure aid polypurine tract selection by HIV-1 reverse transcriptase.

  The Journal of biological chemistry 20020510

• Diastereocontrolled synthesis of dinucleoside phosphorothioates using a novel class of activators, dialkyl(cyanomethyl)ammonium tetrafluoroborates.

  Journal of the American Chemical Society 20020508

• Thymidine phosphorylase expression in normal, hyperplastic and neoplastic prostates: correlation with tumour associated macrophages, infiltrating lymphocytes, and angiogenesis.

  British journal of cancer 20020506

• Regulation of apoptosis by p53 in UV-irradiated human epidermis, psoriatic plaques and senescent keratinocytes.

  Oncogene 20020502

• Synthesis and biological evaluation of novel thioapio dideoxynucleosides.

  Bioorganic & medicinal chemistry 20020501

• DNA oligonucleotide treatment corrects the age-associated decline in DNA repair capacity.

  FASEB journal : official publication of the Federation of American Societies for Experimental Biology 20020501

• Lack of susceptibility of bicyclic nucleoside analogs, highly potent inhibitors of varicella-zoster virus, to the catabolic action of thymidine phosphorylase and dihydropyrimidine dehydrogenase.

  Molecular pharmacology 20020501

• Characterization of Streptococcus pneumoniae thymidylate kinase: steady-state kinetics of the forward reaction and isothermal titration calorimetry.

  The Biochemical journal 20020501

• Formation of modified DNA bases in cells exposed either to gamma radiation or to high-LET particles.

  Radiation research 20020501

• Repeated ultraviolet exposure affords the same protection against DNA photodamage and erythema in human skin types II and IV but is associated with faster DNA repair in skin type IV.

  The Journal of investigative dermatology 20020501

• Haplotype-specific effects on endothelial NO synthase promoter efficiency: modifiable by cigarette smoking.

  Arteriosclerosis, thrombosis, and vascular biology 20020501

• Oxidation of 5'-site guanine at GG and GGG sequences induced by a metabolite of carcinogenic heterocyclic amine PhIP in the presence of Cu(II) and NADH.

  Carcinogenesis 20020501

• HPLC isolation and mass spectrometric characterization of two isomers of thymine glycols in oligodeoxynucleotides.

  Chemical research in toxicology 20020501

• Aldosterone synthase (CYP11B2) -344 C/T polymorphism is related to antihypertensive response: result from the Swedish Irbesartan Left Ventricular Hypertrophy Investigation versus Atenolol (SILVHIA) trial.

  American journal of hypertension 20020501

• Improvement of the MALDI-TOF analysis of DNA with thin-layer matrix preparation.

  Analytical chemistry 20020501

• Cloning and functional analysis of the allelic polymorphism in the transcription regulatory region of interleukin-1 alpha.

  Immunogenetics 20020501

• Porous graphitic carbon shows promise for the rapid screening partial DPD deficiency in lymphocyte dihydropyrimidine dehydrogenase in Chinese, Indian and Malay in Singapore by using semi-automated HPLC-radioassay.

  Clinical biochemistry 20020501

• Ambiguous coding is required for the lethal interaction between methylated DNA bases and DNA mismatch repair.

  DNA repair 20020429

• The effect of IL4 +33C/T polymorphism on risk of Japanese sporadic Alzheimer's disease.

  Neuroscience letters 20020426

• Determination of purine and pyrimidine bases in DNA by micellar electrokinetic capillary chromatography with electrochemical detection.

  Journal of chromatography. A 20020419

• Control of liquid-crystalline properties by base pairing of adenine and thymine.

  Chemphyschem : a European journal of chemical physics and physical chemistry 20020415

• Reduced 5-FU clearance in a patient with low DPD activity due to heterozygosity for a mutant allele of the DPYD gene.

  British journal of cancer 20020408

• Substituted 1,8-naphthyridin-2(1H)-ones are superior to thymine in the recognition of adenine in duplex as well as triplex structures.

  Journal of the American Chemical Society 20020403

• Intercalators. 1. Nature of stacking interactions between intercalators (ethidium, daunomycin, ellipticine, and 4',6-diaminide-2-phenylindole) and DNA base pairs. Ab initio quantum chemical, density functional theory, and empirical potential study.

  Journal of the American Chemical Society 20020403

• Site-resolved energetics in DNA triple helices containing G*TA and T*CG triads.

  Biochemistry 20020402

• Endoreduplication is not inhibited but induced by aphidicolin in cultured cells of tobacco.

  Journal of experimental botany 20020401

• [Deletion of thymine at position 2298 in exon 5 of the androgenic receptor gene causing complete androgen insensitivity syndrome].

  Anales espanoles de pediatria 20020401

• Cross-linked thymine-purine base tandem lesions: synthesis, characterization, and measurement in gamma-irradiated isolated DNA.

  Chemical research in toxicology 20020401

• X-irradiation effects on thymidine kinase (TK): II. The significance of deoxythymidine triphosphate for inhibition of TK1 activity.

  Cell proliferation 20020401

• Effect of the mutation (C3435T) at exon 26 of the MDR1 gene on expression level of MDR1 messenger ribonucleic acid in duodenal enterocytes of healthy Japanese subjects.

  Clinical pharmacology and therapeutics 20020401

• Demonstration of UV-dimers in human skin DNA in situ 3 weeks after exposure.

  Carcinogenesis 20020401

• Comparative study of permanganate oxidation reactions of nucleotide bases by spectroscopy.

  Bioorganic chemistry 20020401

• DNA thermodynamic pressure: a potential contributor to genome evolution.

  Transactions of the Royal Society of Tropical Medicine and Hygiene 20020401

• Recent progress in artificial receptors for phosphate anions in aqueous solution.

  Journal of biotechnology 20020401

• HEPT derivatives as non-nucleoside inhibitors of HIV-1 reverse transcriptase: QSAR studies agree with the crystal structures.

  Journal of computer-aided molecular design 20020401

• Mutational analysis of the base flipping event found in Tn5 transposition.

  The Journal of biological chemistry 20020329

• Direct H atom abstraction from spore photoproduct C-6 initiates DNA repair in the reaction catalyzed by spore photoproduct lyase: evidence for a reversibly generated adenosyl radical intermediate.

  Journal of the American Chemical Society 20020327

• Binding properties of oligonucleotides containing a modified 2'-deoxyuridine with a thymine ended linker to pair with 2'-deoxyadenosine.

  Bioorganic & medicinal chemistry letters 20020325

• Further insight in the photochemistry of DNA: structure of a 2-imidazolone (5-4) pyrimidone adduct derived from the mutagenic pyrimidine (6-4) pyrimidone photolesion by UV irradiation.

  Journal of the American Chemical Society 20020320

• Differential patterns of methylation of the IFN-gamma promoter at CpG and non-CpG sites underlie differences in IFN-gamma gene expression between human neonatal and adult CD45RO- T cells.

  Journal of immunology (Baltimore, Md. : 1950) 20020315

• Self-complementary metal complexes containing a DNA base pair.

  Angewandte Chemie (International ed. in English) 20020315

• Photoreactivity of 5-iodouracil-containing DNA-Sso7d complex in solution: the protein-induced DNA kink causes intrastrand hydrogen abstraction from the 5-methyl of thymine at the 5' side.

  Journal of the American Chemical Society 20020313

• Loss of DNA polymerase beta stacking interactions with templating purines, but not pyrimidines, alters catalytic efficiency and fidelity.

  The Journal of biological chemistry 20020308

• One-pot two-step enzymatic coupling of pyrimidine bases to 2-deoxy-D-ribose-5-phosphate. A new strategy in the synthesis of stable isotope labeled deoxynucleosides.

  The Journal of organic chemistry 20020308

• Relations between clusters of oxidatively damaged nucleotides and active or open nucleosomes in the rat Nth 1 gene.

  Oncogene 20020307

• Ab initio GB study of methylation reaction of adenine, cytosine, guanine, and thymine by methanediazonium ion.

  Journal of theoretical biology 20020307

• New examples of mixed seleno-sulfides; reactions with triphenylphosphine.

  Chemical communications (Cambridge, England) 20020307

• Evaluation of antibodies to thymine ROS-modified DNA poly(dT), in patients with immunologic disorders: relationships to anti n-DNA and anti ENA autoantibodies.

  Panminerva medica 20020301

• Defective repair of 8-hydroxyguanine in mitochondria of MCF-7 and MDA-MB-468 human breast cancer cell lines.

  Cancer research 20020301

• DNA tandem lesions containing 8-oxo-7,8-dihydroguanine and formamido residues arise from intramolecular addition of thymine peroxyl radical to guanine.

  Chemical research in toxicology 20020301

• [From new molecular science to new supramolecular science with macrocyclic polyamines].

  Yakugaku zasshi : Journal of the Pharmaceutical Society of Japan 20020301

• Charge effects for differentiation of oligodeoxynucleotide isomers containing 8-oxo-dG residues.

  Journal of the American Society for Mass Spectrometry 20020301

• Identification of binding sites for the group A streptococcal global regulator CovR.

  Molecular microbiology 20020301

• Comparative study of bis(benzyl)phosphate triesters of 2',3'-dideoxy-2',3'-didehydrothymidine (d4T) and cyclosal-d4TMP--hydrolysis, mechanistic insights and anti-HIV activity.

  Antiviral chemistry & chemotherapy 20020301

• Aryl-substituted and benzo-annulated cyc/osal-derivatives of 2',3'-dideoxy-2',3'-didehydrothymidine monophosphate--correlation of structure, hydrolysis properties and anti-HIV activity.

  Antiviral chemistry & chemotherapy 20020301

• Redox-active metal-containing nucleotides: synthesis, tunability, and enzymatic incorporation into DNA.

  Journal of the American Chemical Society 20020227

• A solid-state (17)O nuclear magnetic resonance study of nucleic acid bases.

  Journal of the American Chemical Society 20020227

• Binding of 5-bromouracil-containing S/MAR DNA to the nuclear matrix.

  DNA research : an international journal for rapid publication of reports on genes and genomes 20020227

• Novel DNA sensor for guanine content.

  Inorganic chemistry 20020225

• Trans-hydrogen-bond (h2)J(NN) and (h1)J(NH) couplings in the DNA A-T base pair: natural bond orbital analysis.

  Journal of the American Chemical Society 20020220

• Vitamin A-related compounds, all-trans retinal and retinoic acids, selectively inhibit activities of mammalian replicative DNA polymerases.

  Biochimica et biophysica acta 20020220

• Novel activity of Escherichia coli mismatch uracil-DNA glycosylase (Mug) excising 8-(hydroxymethyl)-3,N4-ethenocytosine, a potential product resulting from glycidaldehyde reaction.

  Biochemistry 20020219

• Biosynthetic studies on the alpha-glucosidase inhibitor acarbose: the chemical synthesis of dTDP-4-amino-4,6-dideoxy-alpha-D-glucose.

  Carbohydrate research 20020218

• Radiative decay engineering. 2. Effects of Silver Island films on fluorescence intensity, lifetimes, and resonance energy transfer.

  Analytical biochemistry 20020215

• Altered thymidine metabolism due to defects of thymidine phosphorylase.

  The Journal of biological chemistry 20020208

• Structural investigation of the hedamycin:d(ACCGGT)2 complex by NMR and restrained molecular dynamics.

  Biochemical and biophysical research communications 20020208

• Disruption of HIV-1 integrase-DNA complexes by short 6-oxocytosine-containing oligonucleotides.

  Biochemistry 20020205

• The genome factor in region-specific DNA damage: the DNA-reactive drug U-78779 prefers mixed A/T-G/C sequences at the nucleotide level but is region-specific for long pure AT islands at the genomic level.

  Biochemistry 20020205

• Fragmentation of short single DNA strands by 1-30 eV electrons: dependence on base identity and sequence.

  International journal of radiation biology 20020201

• Gas-phase reactions of charged phenyl radicals with neutral biomolecules evaporated by laser-induced acoustic desorption.

  Journal of the American Society for Mass Spectrometry 20020201

• Cytosines do it, thymines do it, even pseudouridines do it--base flipping by an enzyme that acts on RNA.

  Structure (London, England : 1993) 20020201

• The role of UV-B radiation in aquatic and terrestrial ecosystems--an experimental and functional analysis of the evolution of UV-absorbing compounds.

  Journal of photochemistry and photobiology. B, Biology 20020201

• Association of CBP/p300 acetylase and thymine DNA glycosylase links DNA repair and transcription.

  Molecular cell 20020201

• Epidermolysis bullosa simplex Dowling-Meara due to an arginine to cysteine substitution in exon 1 of keratin 14.

  The Australasian journal of dermatology 20020201

• Immunofluorescence detection of radiation-induced DNA base damage.

  Military medicine 20020201

• Inhibiting effect of beta-cyclodextrin on thymine dimerization photosensitized by para-aminobenzoic acid.

  Photochemistry and photobiology 20020201

• [Study of RecA-independent homologous recombination and a chromosomal rearrangement in the Escherichia coli strain carrying an extended tandem duplication].

  Genetika 20020201

• Effect of strand orientation on the interaction of berenil with DNA triple helices.

  European biophysics journal : EBJ 20020201

• A revised model for U4atac/U6atac snRNA base pairing.

  RNA (New York, N.Y.) 20020201

• Molecular, immunological, enzymatic and biochemical studies of coproporphyrinogen oxidase deficiency in a family with hereditary coproporphyria.

  Cellular and molecular biology (Noisy-le-Grand, France) 20020201

• [Effect of jiangu erxian pill on proliferation and cell cycle of human osteoblast].

  Zhongguo Zhong xi yi jie he za zhi Zhongguo Zhongxiyi jiehe zazhi = Chinese journal of integrated traditional and Western medicine 20020201

• Mechanisms of dCMP transferase reactions catalyzed by mouse Rev1 protein.

  The Journal of biological chemistry 20020125

• Determination of active site residues in Escherichia coli endonuclease VIII.

  The Journal of biological chemistry 20020125

• The kinetics of hypoxanthine transport across the perfused choroid plexus of the sheep.

  Brain research 20020125

• Hydrophobic interaction chromatography of homo-oligonucleotides on derivatized Sepharose CL-6B. Application of the solvophobic theory.

  Journal of chromatography. A 20020125

• Structure and activity of a thermostable thymine-DNA glycosylase: evidence for base twisting to remove mismatched normal DNA bases.

  Journal of molecular biology 20020118

• 2-Amino-7-deazaadenine forms stable base pairs with cytosine and thymine.

  Bioorganic & medicinal chemistry letters 20020107

• Comparison of the NMR spectroscopy solution structures of pyranosyl-rNA and its nucleo-delta-peptide analogue.

  Chembiochem : a European journal of chemical biology 20020104

• Lack of correlation between AT frequency and genome size in higher plants and the effect of nonrandomness of base sequences on dye binding.

  Cytometry 20020101

• Methylation-specific oligonucleotide microarray: a new potential for high-throughput methylation analysis.

  Genome research 20020101

• Characterization of the substrate specificity of a human 5-hydroxymethyluracil glycosylase activity.

  Chemical research in toxicology 20020101

• Catechol and hydroquinone have different redox properties responsible for their differential DNA-damaging ability.

  Chemical research in toxicology 20020101

• Repair of oxidized purines and damaged pyrimidines by E. coli Fpg protein: different roles of proline 2 and lysine 57 residues.

  Environmental and molecular mutagenesis 20020101

• Repair of damaged DNA by Arabidopsis cell extract.

  The Plant cell 20020101

• [Modified oligonucleotides containing 1-beta-D-galactopyranosylthymine: synthesis and substrate properties].

  Bioorganicheskaia khimiia 20020101

• CTG repeat polymorphism in DMPK gene in healthy Yugoslav population.

  Acta neurologica Scandinavica 20020101

• Association of a missense mutation in the bovine leptin gene with carcass fat content and leptin mRNA levels.

  Genetics, selection, evolution : GSE 20020101

• Synthesis and in vitro cytotoxic and antiviral activities of 1-(2,5,6-trideoxy-6-halogenohept-5-enofuranurononitrile)thymine and derivatives.

  Nucleosides, nucleotides & nucleic acids 20020101

• Structural features of two distinct molecular complexes of copper(II) cationic porphyrin and deoxyribonucleotides.

  Biopolymers 20020101

• Mutation analysis of the CHK2 gene in breast carcinoma and other cancers.

  Breast cancer research : BCR 20020101

• Effects of bile acids on base hydroxylation in a model of human colonic mucosal DNA.

  Cancer detection and prevention 20020101

• Structure-cytotoxicity relationships for a series of HEPT derivatives.

  Journal of molecular modeling 20020101

• Bench-to-bedside review: fulfilling promises of the Human Genome Project.

  Critical care (London, England) 20020101

• Quantitative assessment of the use of modified nucleoside triphosphates in expression profiling: differential effects on signal intensities and impacts on expression ratios.

  BMC biotechnology 20020101

• [Analysis of factors shaping S. pneumoniae codon usage].

  Yi chuan xue bao = Acta genetica Sinica 20020101

• NMR characterization of the DNA binding properties of a novel Hoechst 33258 analogue peptide building block.

  Bioconjugate chemistry 20020101

• Asymmetric directional mutation pressures in bacteria.

  Genome biology 20020101

• Haplotype analysis of the PPARgamma Pro12Ala and C1431T variants reveals opposing associations with body weight.

  BMC genetics 20020101

• Involvement of a substrate cycle between thymidine and thymidylate in the regulation of DNA precursor pool in ehrlich ascites tumour.

  Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology 20020101

• Total sequence decomposition distinguishes functional modules, 'molegos' in apurinic/apyrimidinic endonucleases.

  BMC bioinformatics 20020101

• Group I aptazymes as genetic regulatory switches.

  BMC biotechnology 20020101

• [Interaction of replication protein A and flap endonuclease 1 with DNA duplexes containing a nick or flap].

  Molekuliarnaia biologiia 20020101

• Life under solar UV radiation in aquatic organisms.

  Advances in space research : the official journal of the Committee on Space Research (COSPAR) 20020101

• Alpha-helix substitution: novel approach for the design of a new zinc finger peptides for AT-rich sequence.

  Nucleic acids research. Supplement (2001) 20020101

• Telomerase-inhibitory effects of sugar-modified nucleotide analogs.

  Nucleic acids research. Supplement (2001) 20020101

• Kinetic analysis of nucleotides incorporated opposite oxidized thymine bases on template DNA.

  Nucleic acids research. Supplement (2001) 20020101

• Role of DNA polymerase II in the tolerance of thymine dimers remaining unexcised in UV-irradiated Escherichia coli exposed to pre-UV nutritional stress.

  Journal of photochemistry and photobiology. B, Biology 20011231

• Disruption of Xpg increases spontaneous mutation frequency, particularly A:T to C:G transversion.

  Mutation research 20011219

• Mutations in human DNA polymerase eta motif II alter bypass of DNA lesions.

  The EMBO journal 20011217

• Influence of sodium ions on the dynamics and structure of single-stranded DNA oligomers: a molecular dynamics study.

  Journal of the American Chemical Society 20011212

• Asymmetric recognition of DNA local distortion. Structure-based functional studies of eukaryotic Msh2-Msh6.

  The Journal of biological chemistry 20011207

• Three-dimensional structures of the Mn and Mg dTDP complexes of the family GT-2 glycosyltransferase SpsA: a comparison with related NDP-sugar glycosyltransferases.

  Journal of molecular biology 20011207

• Mechanism and cleavage specificity of the H-N-H endonuclease colicin E9.

  Journal of molecular biology 20011207

• Crystal structure of an antigen-binding fragment bound to single-stranded DNA.

  Journal of molecular biology 20011207

• Alpha-homo-DNA and RNA form a parallel oriented non-A, non-B-type double helical structure.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20011203

• A direct determination of thymidine triphosphate concentrations without dephosphorylation in peripheral blood mononuclear cells by LC/MS/MS.

  Journal of pharmaceutical and biomedical analysis 20011201

• NMR study of a heterochiral DNA hairpin:impact of L-enantiomery in the loop.

  Journal of biomolecular structure & dynamics 20011201

• Detection of beta-ureidopropionase deficiency with HPLC-electrospray tandem mass spectrometry and confirmation of the defect at the enzyme level.

  Journal of inherited metabolic disease 20011201

• Alpha-anomeric configuration of GT oligodeoxynucleotide leads to loss of the specific aptameric and cytotoxic properties retained by the beta-anomeric analog.

  Antisense & nucleic acid drug development 20011201

• Nucleotide excision repair genes are upregulated by low-dose artificial ultraviolet B: evidence of a photoprotective SOS response?

  The Journal of investigative dermatology 20011201

• Combination of thymidine phosphorylase gene transfer and deoxyinosine treatment greatly enhances 5-fluorouracil antitumor activity in vitro and in vivo.

  Molecular cancer therapeutics 20011201

• [Raman spectroscopic study of microscopic damage on the space structure of DNA with acetic acid].

  Guang pu xue yu guang pu fen xi = Guang pu 20011201

• Effect of thymine glycol on transcription elongation by T7 RNA polymerase and mammalian RNA polymerase II.

  The Journal of biological chemistry 20011130

• The negative ion states of molecules: adenine and guanine.

  Biochemical and biophysical research communications 20011130

• UV laser photolysis of DNA: effect of duplex stability on charge-transfer efficiency.

  Journal of the American Chemical Society 20011121

• AU binding proteins recruit the exosome to degrade ARE-containing mRNAs.

  Cell 20011116

• Inhibition of purified recombinant reverse transcriptase from wild-type and zidovudine-resistant clinical isolates of human immunodeficiency virus type 1 by zidovudine, stavudine, and lamivudine triphosphates.

  The Journal of infectious diseases 20011115

• AT-rich islands in genomic DNA as a novel target for AT-specific DNA-reactive antitumor drugs.

  The Journal of biological chemistry 20011102

• Kinetic and crystallographic analyses support a sequential-ordered bi bi catalytic mechanism for Escherichia coli glucose-1-phosphate thymidylyltransferase.

  Journal of molecular biology 20011102

• Overexpression of Ogt reduces MNU and ENU induced transition, but not transversion, mutations in E. coli.

  Mutation research 20011101

• Repair of O(6)-methylguanine is not affected by thymine base pairing and the presence of MMR proteins.

  Mutation research 20011101

• Protonation studies and multivariate curve resolution on oligodeoxynucleotides carrying the mutagenic base 2-aminopurine.

  Biophysical journal 20011101

• Micropenis and the AR Gene: mutation and CAG repeat-length analysis.

  The Journal of clinical endocrinology and metabolism 20011101

• Hydroxyurea induces site-specific DNA damage via formation of hydrogen peroxide and nitric oxide.

  Japanese journal of cancer research : Gann 20011101

• Fragmentation of photomodified oligodeoxynucleotides adducted with metal ions in an electrospray-ionization ion-trap mass spectrometer.

  Journal of the American Society for Mass Spectrometry 20011101

• Structural characterization of isoxazolidinyl nucleosides by fast atom bombardment tandem mass spectrometry.

  Journal of mass spectrometry : JMS 20011101

• Thymidine phosphorylase as a target for imaging and therapy with thymine analogs.

  Cancer chemotherapy and pharmacology 20011101

• Skin, sun, and vitamin A: from aging to cancer.

  The Journal of dermatology 20011101

• Hb Antalya [codons 3-5 (Leu-Thr-Pro-->Ser-Asp-Ser)]: a new unstable variant leading to chronic microcytic anemia and high Hb A2.

  Hemoglobin 20011101

• A novel point mutation (C571T) in the tissue-non-specific alkaline phosphatase gene in a case of adult-type hypophosphatasia.

  Oral diseases 20011101

• Disease severity associated with cystic fibrosis mutations deltaF508 and S549R(T-->G).

  Eastern Mediterranean health journal = La revue de sante de la Mediterranee orientale = al-Majallah al-sihhiyah li-sharq al-mutawassit 20011101

• Bond energies and attachments sites of sodium and potassium cations to DNA and RNA nucleic acid bases in the gas phase.

  Journal of the American Chemical Society 20011024

• Thymidine phosphorylase and dihydropyrimidine dehydrogenase protein expression in colorectal cancer.

  International journal of cancer 20011015

• Synthesis and thermodynamic studies of oligonucleotides containing the two isomers of thymine glycol.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20011015

• RNA-DNA hybrids containing damaged DNA are substrates for RNase H.

  Bioorganic & medicinal chemistry letters 20011008

• Crystal structure of a Y-family DNA polymerase in action: a mechanism for error-prone and lesion-bypass replication.

  Cell 20011005

• Use of a combined enzymatic digestion/ESI mass spectrometry assay to study the effect of TATA-binding protein on photoproduct formation in a TATA box.

  Biochemistry 20011002

• Does cytosine-thymine-guanine (CTG) expansion size predict cardiac events and electrocardiographic progression in myotonic dystrophy?

  Heart (British Cardiac Society) 20011001

• Hydration heat capacity of nucleic acid constituents determined from the random network model.

  Biophysical journal 20011001

• Preliminary observation of 99mTc-thymine imaging in breast neoplasms.

  Nuclear medicine communications 20011001

• A G577R mutation in the human AR P box results in selective decreases in DNA binding and in partial androgen insensitivity syndrome.

  Molecular endocrinology (Baltimore, Md.) 20011001

• Acrylonitrile enhances H2O2-mediated DNA damage via nitrogen-centered radical formation.

  Chemical research in toxicology 20011001

• Interaction of fission yeast ORC with essential adenine/thymine stretches in replication origins.

  Genes to cells : devoted to molecular & cellular mechanisms 20011001

• DNA affinity chromatography.

  Molecular biotechnology 20011001

• Killing effects of ganciclovir on human pulmonary adenocarcinoma cell A549 transduced with HSV1-TK gene in vitro and in vivo.

  Acta pharmacologica Sinica 20011001

• Pyrimidine base catabolism in Pseudomonas putida biotype B.

  Antonie van Leeuwenhoek 20011001

• (Chemo)enzymatic synthesis of dTDP-activated 2,6-dideoxysugars as building blocks of polyketide antibiotics.

  Carbohydrate research 20010921

• The DNA glycosylase T:G mismatch-specific thymine DNA glycosylase represses thyroid transcription factor-1-activated transcription.

  The Journal of biological chemistry 20010907

• The HAP1 protein stimulates the turnover of human mismatch-specific thymine-DNA-glycosylase to process 3,N(4)-ethenocytosine residues.

  Mutation research 20010901

• Strand displacement recognition of mixed adenine-cytosine sequences in double stranded DNA by thymine-guanine PNA (peptide nucleic acid).

  Bioorganic & medicinal chemistry 20010901

• Recognition and cleavage at the DNA major groove.

  Bioorganic & medicinal chemistry 20010901

• The contribution of the methyl groups on thymine bases to binding specificity and affinity by alanine-rich mutants of the bZIP motif.

  Bioorganic & medicinal chemistry 20010901

• Escherichia coli DNA glycosylase Mug: a growth-regulated enzyme required for mutation avoidance in stationary-phase cells.

  Molecular microbiology 20010901

• Comparison of Tc-99m THY and Tc-99m MIBI scans for diagnosis of breast lesions.

  Journal of experimental & clinical cancer research : CR 20010901

• Interleukin 10 inhibits the rat VSMC proliferation and collagen secretion stimulated by angiotensin II.

  Chinese medical sciences journal = Chung-kuo i hsueh k'o hsueh tsa chih 20010901

• DNA chain length dependence of formation and dynamics of hMutSalpha.hMutLalpha.heteroduplex complexes.

  The Journal of biological chemistry 20010831

• Ultratrace determination of adenine in the presence of copper by adsorptive stripping voltammetry.

  Talanta 20010830

• High-affinity DNA binding of HU protein from the hyperthermophile Thermotoga maritima.

  Journal of molecular biology 20010817

• A new type of potent inhibitors of HIV-1 TAR RNA-Tat peptide binding by zinc(II)-macrocyclic tetraamine complexes.

  Journal of the American Chemical Society 20010815

• Biochemical characterization of uracil processing activities in the hyperthermophilic archaeon Pyrobaculum aerophilum.

  The Journal of biological chemistry 20010810

• Mechanism of metal-mediated DNA damage induced by metabolites of carcinogenic 2-nitropropane.

  Mutation research 20010808

• Mechanistic roles of Thr134, Tyr160, and Lys 164 in the reaction catalyzed by dTDP-glucose 4,6-dehydratase.

  Biochemistry 20010807

• Structure-based design, synthesis, and biological evaluation of conformationally restricted novel 2-alkylthio-6-[1-(2,6-difluorophenyl)alkyl]-3,4-dihydro-5-alkylpyrimidin-4(3H)-ones as non-nucleoside inhibitors of HIV-1 reverse transcriptase.

  Journal of medicinal chemistry 20010802

• Mutation in the gene for bone morphogenetic protein receptor II as a cause of primary pulmonary hypertension in a large kindred.

  The New England journal of medicine 20010802

• Sequence-specific damage induced by the impact of 3-30 eV electrons on oligonucleotides.

  Radiation research 20010801

• Site specificity and mechanism of oxidative DNA damage induced by carcinogenic catechol.

  Carcinogenesis 20010801

• Abrogation of the Chk1-mediated G(2) checkpoint pathway potentiates temozolomide-induced toxicity in a p53-independent manner in human glioblastoma cells.

  Cancer research 20010801

• Haplotype analysis of the myotonic dystrophy type 1 (DM1) locus in Taiwan: implications for low prevalence and founder mutations of Taiwanese myotonic dystrophy type 1.

  European journal of human genetics : EJHG 20010801

• Synthesis of unnatural 7-substituted-1-(2-deoxy-beta-D-ribofuranosyl)isocarbostyrils: 'thymine replacement' analogs of deoxythymidine for evaluation as antiviral and anticancer agents.

  Nucleosides, nucleotides & nucleic acids 20010801

• Hyperintensity of posterior pituitary on MR T1WI in a boy with central diabetes insipidus caused by missense mutation of neurophysin II gene.

  Endocrine journal 20010801

• Selective interaction of tirapazamine with DNA bases and DNA. A comparison of cyclic voltammetry and electrolysis techniques.

  Free radical research 20010801

• Photo-cross-linked oligonucleotide duplex as a decoy-DNA for inhibition of restriction endonuclease activity.

  Bioorganic chemistry 20010801

• Imino proton exchange and base-pair kinetics in RNA duplexes.

  Biochemistry 20010731

• Mitochondrial genomes of a bandicoot and a brushtail possum confirm the monophyly of australidelphian marsupials.

  Proceedings. Biological sciences 20010722

• Cellular effects of 5-formyluracil in DNA.

  Mutation research 20010712

• Simple gas chromatographic-mass spectrometric procedure for diagnosing pyrimidine degradation defects for prevention of severe anticancer side effects.

  Journal of chromatography. B, Biomedical sciences and applications 20010705

• Mutagenesis by O(6)-methyl-, O(6)-ethyl-, and O(6)-benzylguanine and O(4)-methylthymine in human cells: effects of O(6)-alkylguanine-DNA alkyltransferase and mismatch repair.

  Chemical research in toxicology 20010701

• Identification of a stop codon mutation in the CBFA1 runt domain from a patient with cleidocranial dysplasia and cleft lip.

  Journal of oral pathology & medicine : official publication of the International Association of Oral Pathologists and the American Academy of Oral Pathology 20010701

• Spectroscopic studies on molecular recognition capabilities of a nucleolipid bearing thymine headgroup to adenosine.

  Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy 20010701

• Predicting anti-HIV activity: computational approach using a novel topological descriptor.

  Journal of computer-aided molecular design 20010701

• Differential incorporation and removal of antiviral deoxynucleotides by human DNA polymerase gamma.

  The Journal of biological chemistry 20010629

• Internucleobase-interaction-directed self-assembly of nanofibers from homo- and heteroditopic 1,omega-nucleobase bolaamphiphiles.

  Journal of the American Chemical Society 20010627

• Preimplantation diagnosis for Fanconi anemia combined with HLA matching.

  JAMA 20010627

• Laser-induced photo-cross-linking of cisplatin-modified DNA to HMG-domain proteins.

  Biochemistry 20010626

• A stem-loop of Tetrahymena telomerase RNA distant from the template potentiates RNA folding and telomerase activity.

  Biochemistry 20010619

• Stimulation of human endonuclease III by Y box-binding protein 1 (DNA-binding protein B). Interaction between a base excision repair enzyme and a transcription factor.

  The Journal of biological chemistry 20010615

• Association between the T29-->C polymorphism in the transforming growth factor beta1 gene and breast cancer among elderly white women: The Study of Osteoporotic Fractures.

  JAMA 20010613

• Probing catalysis by Escherichia coli dTDP-glucose-4,6-dehydratase: identification and preliminary characterization of functional amino acid residues at the active site.

  Biochemistry 20010605

• Base sequence dependence of in vitro translesional DNA replication past a bulky lesion catalyzed by the exo- Klenow fragment of Pol I.

  Biochemistry 20010605

• Crystal structures of a ddATP-, ddTTP-, ddCTP, and ddGTP- trapped ternary complex of Klentaq1: insights into nucleotide incorporation and selectivity.

  Protein science : a publication of the Protein Society 20010601

• Structure, mechanism and engineering of a nucleotidylyltransferase as a first step toward glycorandomization.

  Nature structural biology 20010601

• Monoclonal antibody to single-stranded DNA: a potential tool for DNA repair studies.

  Biochemical and biophysical research communications 20010601

• Exploring the role of the 5'-position of TSAO-T. Synthesis and anti-HIV evaluation of novel TSAO-T derivatives.

  Antiviral research 20010601

• Impact of Cu(II) and Ni(II) on a structure of chiral peptide nucleic acids having four, six and eight thymines in a peptide side chain.

  Journal of inorganic biochemistry 20010601

• Explaining photodermatosis: cyclopentenone vs. alpha-methylene-gamma-lactone natural products.

  Fitoterapia 20010601

• [Oxidative DNA damage].

  Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 20010601

• [Repair networks for base damage and single-strand breaks].

  Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 20010601

• Sequence and organization of the mitochondrial genome of the Chagas disease vector, Triatoma dimidiata.

  Insect molecular biology 20010601

• Application of capillary electrophoresis in the analysis of novel synthetic dideoxynucleoside analogues with potential anti-HIV activity.

  Biomedical chromatography : BMC 20010601

• Reviewing efficacy of alternative water treatment techniques.

  Health estate 20010601

• Evaluation of oral ro70-0004/003, an alpha1A-adrenoceptor antagonist, in the treatment of male erectile dysfunction.

  International journal of impotence research 20010601

• Ether phospholipid-AZT conjugates possessing anti-HIV and antitumor cell activity. Synthesis, conformational analysis, and study of their thermal effects on membrane bilayers.

  Journal of medicinal chemistry 20010524

• DNA repair mechanism by photolyase: electron transfer path from the photolyase catalytic cofactor FADH(-) to DNA thymine dimer.

  Journal of theoretical biology 20010521

• Backbone modifications of aromatic peptide nucleic acid (APNA ) monomers and their hybridization properties with DNA and RNA.

  The Journal of organic chemistry 20010518

• At nonzero temperatures, stacked structures of methylated nucleic acid base pairs and microhydrated nonmethylated nucleic acid base pairs are favored over planar hydrogen-bonded structures: a molecular dynamics simulations study.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20010518

• Metal-modified nucleobase pairs and triplets as cytosine receptors.

  Chemistry (Weinheim an der Bergstrasse, Germany) 20010518

• Recognition and kinetics for excision of a base lesion within clustered DNA damage by the Escherichia coli proteins Fpg and Nth.

  Biochemistry 20010515

• Oxidation of thymine to 5-formyluracil in DNA promotes misincorporation of dGMP and subsequent elongation of a mismatched primer terminus by DNA polymerase.

  The Journal of biological chemistry 20010511

• Characterization of functional interactions among the Escherichia coli mismatch repair proteins using a bacterial two-hybrid assay.

  Mutation research 20010510

• Mutations induced by 5-formyl-2'-deoxyuridine in Escherichia coli include base substitutions that can arise from mispairs of 5-formyluracil with guanine, cytosine and thymine.

  Mutation research 20010509

• Insight into the catalytic mechanism of DNA polymerase beta: structures of intermediate complexes.

  Biochemistry 20010508

• Pyrrolidine nucleic acids: DNA/PNA oligomers with 2-hydroxy/aminomethyl- 4-(thymin-1-yl)pyrrolidine-N-acetic acid.

  Organic letters 20010503

• Aminoethylprolyl (aep) PNA: mixed purine/pyrimidine oligomers and binding orientation preferences for PNA:DNA duplex formation.

  Organic letters 20010503

• Electron affinities of the DNA and RNA bases.

  Journal of the American Chemical Society 20010502

• Role of MED1 (MBD4) Gene in DNA repair and human cancer.

  Journal of cellular physiology 20010501

• Catechol estrogens induce oxidative DNA damage and estradiol enhances cell proliferation.

  International journal of cancer 20010501

• Role of spinal alpha1-adrenoceptor subtypes in the bladder reflex in anesthetized rats.

  American journal of physiology. Regulatory, integrative and comparative physiology 20010501

• Actinomycin D binds strongly to d(TGTCATTG), a single-stranded DNA devoid of GpC sites.

  Biochemistry 20010501

• Numerous gene rearrangements in the mitochondrial genome of the wallaby louse, Heterodoxus macropus (Phthiraptera).

  Molecular biology and evolution 20010501

• Microuli, a family of miniature subterminal inverted-repeat transposable elements (MSITEs): transposition without terminal inverted repeats.

  Molecular biology and evolution 20010501

• An integrated system to study multiply substituted human immunodeficiency virus type 1 reverse transcriptase.

  Analytical biochemistry 20010501

• Fragmentation mechanisms of oligodeoxynucleotides: effects of replacing phosphates with methylphosphonates and thymines with other bases in T-rich sequences.

  Journal of the American Society for Mass Spectrometry 20010501

• Lethal outcome of a patient with a complete dihydropyrimidine dehydrogenase (DPD) deficiency after administration of 5-fluorouracil: frequency of the common IVS14+1G>A mutation causing DPD deficiency.

  Clinical cancer research : an official journal of the American Association for Cancer Research 20010501

• Oxidative DNA damage induced by a metabolite of carcinogenic o-anisidine: enhancement of DNA damage and alteration in its sequence specificity by superoxide dismutase.

  Archives of biochemistry and biophysics 20010501

• Construction of peptide conjugates with peptide nucleic acids containing an anthracene probe and their interactions with DNA.

  Bioorganic & medicinal chemistry 20010501

• Transcription of essential cell division genes is linked to chromosome replication in Escherichia coli.

  Molecular microbiology 20010501

• CTLA-4 gene expression is influenced by promoter and exon 1 polymorphisms.

  Genes and immunity 20010501

• Analysis of a polycytosine tract and heteroplasmic length variation in the mitochondrial DNA D-loop of patients with diabetes, MELAS syndrome and race-matched controls.

  Diabetic medicine : a journal of the British Diabetic Association 20010501

• Epidermal p53 response and repair of thymine dimers in human skin after a single dose of ultraviolet radiation: effects of photoprotection.

  Acta dermato-venereologica 20010501

• [Cloning of the sugar related biosynthesis gene cluster from Streptomyces tenebrarius H6].

  Sheng wu gong cheng xue bao = Chinese journal of biotechnology 20010501

• Oligonucleotide-directed mutagenesis without phenotypic selection.

  Current protocols in molecular biology 20010501

• Oligonucleotide-directed mutagenesis without phenotypic selection.

  Current protocols in neuroscience 20010501

• Superoxide dismutases enhance H2O2-induced DNA damage and alter its site specificity.

  FEBS letters 20010427

• The crystal structures of psoralen cross-linked DNAs: drug-dependent formation of Holliday junctions.

  Journal of molecular biology 20010420

• Binding of nucleotides to nucleoside diphosphate kinase: a calorimetric study.

  Biochemistry 20010417

• Association study of CAG repeats in the KCNN3 gene in Japanese patients with schizophrenia, schizoaffective disorder and bipolar disorder.

  Psychiatry research 20010415

• N(1)-C(5')-linked dimer hydrates of 5-substituted uracils produced by anodic oxidation in aqueous solution.

  The Journal of organic chemistry 20010406

• Photolysis of thymine oxetanes produces triplet excited carbonyl compounds with high efficiency.

  Journal of the American Chemical Society 20010404

• 15-mer DNA duplexes containing an abasic site are thermodynamically more stable with adjacent purines than with pyrimidines.

  Biochemistry 20010403

• Low-energy (5-40 eV) electron-stimulated desorption of anions from physisorbed DNA bases.

  Radiation research 20010401

• Phylogeny, function, and evolution of the cupins, a structurally conserved, functionally diverse superfamily of proteins.

  Molecular biology and evolution 20010401

• Mechanism of oxidative DNA damage induced by carcinogenic 4-aminobiphenyl.

  Free radical biology & medicine 20010401

• Inheritance of a stable mutation in a family with early-onset disease.

  Nephron 20010401

• Mass spectrometric evidence for mechanisms of fragmentation of charge-derivatized peptides.

  Journal of the American Society for Mass Spectrometry 20010401

• Genotyping the -521C/T functional polymorphism in the promoter region of dopamine D4 receptor (DRD4) gene.

  Electrophoresis 20010401

• Thymine-metal ion interactions: relevance for thymine quartet structures.

  Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 20010401

• Design and characterization of asparagine- and lysine-containing alanine-based helical peptides that bind selectively to A.T base pairs of oligonucleotides immobilized on a 27 mhz quartz crystal microbalance.

  Biochemistry 20010327

• The crystal structure of dTDP-D-Glucose 4,6-dehydratase (RmlB) from Salmonella enterica serovar Typhimurium, the second enzyme in the dTDP-l-rhamnose pathway.

  Journal of molecular biology 20010316

• Affinity of mismatch-binding protein MutS for heteroduplexes containing different mismatches.

  The Biochemical journal 20010315

• Significance of nucleobase shape complementarity and hydrogen bonding in the formation and stability of the closed polymerase-DNA complex.

  Biochemistry 20010313

• Solution structure of an A-tract DNA bend.

  Journal of molecular biology 20010309

• Patterns of p53 G-->T transversions in lung cancers reflect the primary mutagenic signature of DNA-damage by tobacco smoke.

  Carcinogenesis 20010301

• No detectable DNA excision repair in UV-exposed hepatocytes from two catfish species.

  Comparative biochemistry and physiology. Toxicology & pharmacology : CBP 20010301

• A seminested PCR test for simultaneous detection of two common mutations (35delG and 167delT) in the connexin-26 gene.

  Molecular diagnosis : a journal devoted to the understanding of human disease through the clinical application of molecular biology 20010301

• p53 effects both the duration of G2/M arrest and the fate of temozolomide-treated human glioblastoma cells.

  Cancer research 20010301

• The significance of dihydropyrimidine dehydrogenase (DPD) activity in bladder cancer.

  European journal of cancer (Oxford, England : 1990) 20010301

• Rapid detection of a common dihydropyrimidine dehydrogenase mutation associated with 5-fluorouracil toxicity and congenital thymine uraciluria using fluorogenic hybridization probes.

  Clinical biochemistry 20010301

• Low-dose, sublingual AZT-monophosphate therapy for HIV+ patients?

  Medical hypotheses 20010301

• The production and evaluation of antibodies for enzyme immunoassay of AZTTP.

  Nucleosides, nucleotides & nucleic acids 20010301

• Role of the Escherichia coli and human DNA glycosylases that remove 5-formyluracil from DNA in the prevention of mutations.

  Journal of radiation research 20010301

• Mosaic structure of the DNA molecules of the human chromosomes 21 and 22.

  Molecular biology reports 20010301

• Individual determination of the yield of the main UV-induced dimeric pyrimidine photoproducts in DNA suggests a high mutagenicity of CC photolesions.

  Biochemistry 20010227

• Determination of high-energy phosphate compounds and inorganic phosphate by reversed-phase high-performance liquid chromatography: evaluation of myocardial metabolic status in aerobically perfused and hypoxic mouse heart.

  Journal of chromatography. B, Biomedical sciences and applications 20010225

• The eosinophil peroxidase-hydrogen peroxide-bromide system of human eosinophils generates 5-bromouracil, a mutagenic thymine analogue.

  Biochemistry 20010220

• Crystal structure of dihydropyrimidine dehydrogenase, a major determinant of the pharmacokinetics of the anti-cancer drug 5-fluorouracil.

  The EMBO journal 20010215

• 5-Formyluracil and its nucleoside derivatives confer toxicity and mutagenicity to mammalian cells by interfering with normal RNA and DNA metabolism.

  Toxicology letters 20010203

• Molecular diversity of quinolone resistance in genetically related clinical isolates of Staphylococcus aureus and susceptibility to newer quinolones.

  The Journal of antimicrobial chemotherapy 20010201

• Characterization of plant beta-ureidopropionase and functional overexpression in Escherichia coli.

  Plant physiology 20010201

• Stimulation of melanogenesis by DNA oligonucleotides: effect of size, sequence and 5' phosphorylation.

  Journal of dermatological science 20010201

• Differences in DNA synthesis in vitro using isolated nuclei from regenerating livers of young and aged rats.

  Mechanisms of ageing and development 20010201

• Structure of the N6-adenine DNA methyltransferase M.TaqI in complex with DNA and a cofactor analog.

  Nature structural biology 20010201

• Induction and excretion of ultraviolet-induced 8-oxo-2'-deoxyguanosine and thymine dimers in vivo: implications for PUVA.

  The Journal of investigative dermatology 20010201

• Enhanced S phase delay and inhibition of replication of an undamaged shuttle vector in UVC-irradiated xeroderma pigmentosum variant.

  Carcinogenesis 20010201

• Metastable decay of negatively charged oligodeoxynucleotides analyzed with ultraviolet matrix-assisted laser desorption/ionization post-source decay and deuterium exchange.

  Journal of the American Society for Mass Spectrometry 20010201

• Haplotype analyses with the human leucocyte antigen and tumour necrosis factor-alpha genes in narcolepsy families.

  Psychiatry and clinical neurosciences 20010201

• Confounded cytosine! Tinkering and the evolution of DNA.

  Nature reviews. Molecular cell biology 20010201

• Characterization of DNA damage at purine residues in oligonucleotides and calf thymus DNA induced by the mutagen 1-nitrosoindole-3-acetonitrile.

  Chemical research in toxicology 20010201

• Isolation and frontier molecular orbital investigation of bioactive quinone-methide triterpenoids from the bark of Salacia petenensis.

  Planta medica 20010201

• Crystal structure of 2-[N-(t-butoxycarbonyl)amino]-4-(thymin-1-yl)-butyric acid methyl ester.

  Analytical sciences : the international journal of the Japan Society for Analytical Chemistry 20010201

• Conformation and dynamics of abasic sites in DNA investigated by time-resolved fluorescence of 2-aminopurine.

  Biochemistry 20010130

• Minor groove functional groups are critical for the B-form conformation of duplex DNA.

  Biochemistry 20010130

• Structure and organization of bacteriophage Pf3 probed by Raman and ultraviolet resonance Raman spectroscopy.

  Biochemistry 20010116

• Interferon gamma-dependent induction of thymidine phosphorylase/platelet-derived endothelial growth factor through gamma-activated sequence-like element in human macrophages.

  Cancer research 20010115

• The characteristics of nucleobase transport and metabolism by the perfused sheep choroid plexus.

  Brain research 20010105

• The transport of a reversible proton pump antagonist, 5, 6-dimethyl-2-(4-Fluorophenylamino)-4-(1-methyl-1,2,3, 4-tetrahydroisoquinoline-2-yl) pyrimidine hydrochloride (YH1885), across caco-2 cell monolayers.

  Drug metabolism and disposition: the biological fate of chemicals 20010101

• CD81 nucleotide mutation in hepatocellular carcinoma and lack of CD81 polymorphism in patients at stages of hepatitis C virus infection.

  Journal of medical virology 20010101

• Ionization mechanism of oligonucleotides in matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.

  Rapid communications in mass spectrometry : RCM 20010101

• T>C transition in codon 72 (TCG-->CCG), S72P, a putative hotspot in PMP22.

  Human mutation 20010101

• Identification of genetic variants (g789C>T and G111S) in the human HSPB2 gene.

  Human mutation 20010101

• A novel polymorphism (c288C>T) of the NPHS2 gene identified in a Taiwan Chinese family.

  Human mutation 20010101

• A novel polymorphism IVS2+843C>T in the alternate promoter b1 of the human AE2 anion exchanger gene.

  Human mutation 20010101

• A study of peptide--peptide interaction by matrix-assisted laser desorption/ionization.

  Journal of the American Society for Mass Spectrometry 20010101

• MNGIE: from nuclear DNA to mitochondrial DNA.

  Neuromuscular disorders : NMD 20010101

• Mechanisms of nitric oxide-induced cytotoxicity in normal human hepatocytes.

  Environmental and molecular mutagenesis 20010101

• An electrochemical evidence of free radicals formation from flutamide and its reactivity with endo/xenobiotics of pharmacological relevance.

  Bioelectrochemistry (Amsterdam, Netherlands) 20010101

• Mutagenic effects of 5-formyluracil on a plasmid vector during replication in Escherichia coli.

  International journal of radiation biology 20010101

• Enhanced loop DNA folding induced by thymine-CH3 group contact and perpendicular guanine-thymine interaction.

  Journal of biomolecular NMR 20010101

• Synthesis of 1-(2-deoxy-beta-D-ribofuranosyl)-2,4-difluoro-5-substituted-benzenes: 'thymine replacement' analogs of thymidine for evaluation as anticancer and antiviral agents.

  Nucleosides, nucleotides & nucleic acids 20010101

• Myotonic dystrophy protein kinase (DMPK) gene expression in lymphocytes of patients with myotonic dystrophy.

  Archives of medical research 20010101

• A novel nonsense mutation of the GTP cyclohydrolase I gene in a family with dopa-responsive dystonia.

  Human heredity 20010101

• Utilization of amino acids in growing kidney proximal tubule cell cultures.

  Cell biology international 20010101

• Mouse models of alpha-synucleinopathy and Lewy pathology. Alpha-synuclein expression in transgenic mice.

  Advances in experimental medicine and biology 20010101

• Survey of human mitochondrial diseases using new genomic/proteomic tools.

  Genome biology 20010101

• pncA mutations in clinical Mycobacterium tuberculosis isolates from Korea.

  BMC infectious diseases 20010101

• Unique mutations in mitochondrial DNA of senescence-accelerated mouse (SAM) strains.

  The Journal of heredity 20010101

• Factors influencing the removal of thymine glycol from DNA in gamma-irradiated human cells.

  Progress in nucleic acid research and molecular biology 20010101

• DNA substrates containing defined oxidative base lesions and their application to study substrate specificities of base excision repair enzymes.

  Progress in nucleic acid research and molecular biology 20010101

• Thymine DNA glycosylase.

  Progress in nucleic acid research and molecular biology 20010101

• Base excision repair in nuclear and mitochondrial DNA.

  Progress in nucleic acid research and molecular biology 20010101

• Properties and functions of human uracil-DNA glycosylase from the UNG gene.

  Progress in nucleic acid research and molecular biology 20010101

• Synthesis and properties of novel triphosphate analogues: ribonucleoside and deoxyribonucleoside (alpha-P-borano, alpha-P-thio)triphosphates.

  Nucleosides, nucleotides & nucleic acids 20010101

• Inhibition of human telomerase by L-enantiomers of natural 2'-deoxyribonucleoside 5'-triphosphates.

  Nucleosides, nucleotides & nucleic acids 20010101

• 1,2-disubstituted cyclohexane carbocyclic analogues of nucleosides.

  Nucleosides, nucleotides & nucleic acids 20010101

• Understanding the mode of action of L-nucleosides as antiviral agents: a molecular modeling approach.

  Nucleosides, nucleotides & nucleic acids 20010101

• Synthesis and antiproliferative activity of some 4'-C-hydroxymethyl-alpha- and -beta-D-arabino-pentofuranosyl pyrimidine nucleosides.

  Nucleosides, nucleotides & nucleic acids 20010101

• Synthesis and evaluation of alpha-LNA.

  Nucleosides, nucleotides & nucleic acids 20010101

• Synthesis of 3'-thioamido-modified 3'-deoxythymidine-5'-triphosphates and their use as chain terminators in Sanger-DNA sequencing.

  Nucleosides, nucleotides & nucleic acids 20010101

• Benzyl-functionalized cycloSal-d4T monophosphates.

  Nucleosides, nucleotides & nucleic acids 20010101

• Effect of triplet repeat expansion on chromatin structure and expression of DMPK and neighboring genes, SIX5 and DMWD, in myotonic dystrophy.

  Molecular genetics and metabolism 20010101

• Hypoxia and oxidative stress in breast cancer. Oxidative stress: its effects on the growth, metastatic potential and response to therapy of breast cancer.

  Breast cancer research : BCR 20010101

• The rates of hydrolysis of thymidyl-3',5'-thymidine-H-phosphonate: the possible role of nucleic acids linked by diesters of phosphorous acid in the origins of life.

  Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life 20010101

• [Conformational polymorphism and extensibility of DNA quadruplexes formed from d(GT)n repeats].

  Molekuliarnaia biologiia 20010101

• The expression of thymidine phosphorylase suppresses spontaneous apoptosis of cancer cells in esophageal squamous cell carcinoma.

  Pathobiology : journal of immunopathology, molecular and cellular biology 20010101

• Prevalence of the methylenetetrahydrofolate reductase 677C > T mutation in the Mediterranean Spanish population. Association with cardiovascular risk factors.

  European journal of epidemiology 20010101

• Potential of (GATA)n microsatellites from rice for inter- and intra-specific variability studies.

  BMC evolutionary biology 20010101

• Detection of mutations in the dystrophin gene via automated DHPLC screening and direct sequencing.

  BMC genetics 20010101

• The loop pattern of chromosomal DNA may significantly differ in AT-rich and GC-rich isochores.

  Doklady. Biochemistry and biophysics 20010101

• TT dinucleotides containing an isoxazoline moiety: synthesis and binding affinity study.

  Nucleosides, nucleotides & nucleic acids 20010101

• Discrimination of three mutational events that result in a disruption of the R122 primary autolysis site of the human cationic trypsinogen (PRSS1) by denaturing high performance liquid chromatography.

  BMC genetics 20010101

• Long term adaptation of a microbial population to a permanent metabolic constraint: overcoming thymineless death by experimental evolution of Escherichia coli.

  BMC biotechnology 20010101

• Small GTP-binding proteins in the nuclei of human placenta.

  Journal of cellular biochemistry 20010101

• Resistance of spores of Bacillus species to ultraviolet light.

  Environmental and molecular mutagenesis 20010101

• Cloning and characterisation of the Hint homologue of the thermophile Thermus thermophilus.

  DNA sequence : the journal of DNA sequencing and mapping 20010101

• High correlation between the turnover of nucleotides under mutational pressure and the DNA composition.

  BMC evolutionary biology 20010101

• A quantum-dynamics study of the prototropic tautomerism of guanine and its contribution to spontaneous point mutations in Escherichia coli.

  Biopolymers 20010101

• Specific interactions of deprotonated carboxylic group with uracil and thymine provoke diketo-->keto-enol tautomeric transition in bases.

  Ukrains'kyi biokhimichnyi zhurnal (1999 ) 20010101

• Synthesis of carbocyclic nucleosides as potential antiviral agents.

  Nucleic acids research. Supplement (2001) 20010101

• Transfection of fluorescent probed antisense compounds: L-cysteine derivatives of nucleic acid bases.

  Nucleic acids research. Supplement (2001) 20010101

• Binding activity of replication protein A to single-stranded DNA containing oxidized pyrimidine base.

  Nucleic acids research. Supplement (2001) 20010101

• Synthesis of a new type of artificial nucleic acid derived from optically active serine.

  Nucleic acids research. Supplement (2001) 20010101

• Telomerase-inhibitory effects of the triphosphate derivatives of some biologically active nucleosides.

  Nucleic acids research. Supplement (2001) 20010101

• Structural transition of d(G4T4G4) from antiparallel to parallel G-quartet induced by divalent cations.

  Nucleic acids research. Supplement (2001) 20010101

• X-ray analyses of DNA dodecamers containing 2'-deoxy-5-formyluridine.

  Nucleic acids research. Supplement (2001) 20010101

• A single gene (yes) controls pigmentation of eyes and scales in Heliothis virescens.

  Journal of insect science (Online) 20010101

• Transcription start-site mapping.

  Methods in molecular medicine 20010101

• Thymidine phosphorylase induces carcinoma cell oxidative stress and promotes secretion of angiogenic factors.

  Cancer research 20001115

• Synthesis and biological evaluation of L- and D-configuration 1,3-dioxolane 5-azacytosine and 6-azathymine nucleosides.

  Bioorganic & medicinal chemistry letters 20000918

• Adenine-induced selective apoptosis toward HIV chronically infected cells in vitro.

  Biochemical and biophysical research communications 20000714

• TSAO-T analogues bearing amino acids at position N-3 of thymine: synthesis and anti-human immunodeficiency virus activity.

  Antiviral chemistry & chemotherapy 20000101

• Synthesis and antiviral evaluation of the beta-L-enantiomers of some thymine 3'-deoxypentofuranonucleoside derivatives.

  Nucleosides, nucleotides & nucleic acids 20000101

• In vitro alpha1-adrenoceptor pharmacology of Ro 70-0004 and RS-100329, novel alpha1A-adrenoceptor selective antagonists.

  British journal of pharmacology 19990501

• Synthesis and antiviral activity of 1-[1,5-dialkyl-1H-1,2,4-triazol-3-yl)methyl]thymines.

  Archiv der Pharmazie 19990401

• Synthesis of [(2'S, 3'S)-bis(hydroxylmethyl)pyrrolidin-1-yl] purine and pyrimidine nucleosides as potential antiviral agents.

  Bioorganic & medicinal chemistry letters 19980519

• Synthesis and anti-HIV-1 activity of novel 2,3-dihydro-7H-thiazolo[3,2-a]pyrimidin-7-ones.

  Journal of medicinal chemistry 19980115

• Actinomycin D amplifies site-specific DNA cleavage induced by neocarzinostatin.

  Biochemical and biophysical research communications 19971009

• Synthesis and potent anti-HIV-1 activity of novel 6-benzyluracil analogues of 1-[(2-hydroxyethoxy)methyl]-6-(phenylthio)thymine.

  Journal of medicinal chemistry 19960607

• Synthesis and biological evaluation of1',2'-seconucleo-5'- phosphonates.

  Journal of medicinal chemistry 19960301

• Stereoselective synthesis, chemistry and antiviral evaluation of 1-(2,3-dideoxy-3-C-hydroxymethyl-beta-D-threo-pentofuranosyl)thymine derivatives.

  Bioorganic & medicinal chemistry 19950901

• Synthesis and antiviral activity of 6-benzyl analogs of 1-[(2-hydroxyethoxy)methyl]-6-(phenylthio)thymine (HEPT) as potent and selective anti-HIV-1 agents.

  Journal of medicinal chemistry 19950721

• Resistance to 1-[(2-hydroxyethoxy)methyl]-6-(phenylthio)thymine derivatives is generated by mutations at multiple sites in the HIV-1 reverse transcriptase.

  Virology 19950620

• Synthesis and anti-HIV activity of [AZT]-[TSAO-T] and [AZT]-[HEPT] dimers as potential multifunctional inhibitors of HIV-1 reverse transcriptase.

  Journal of medicinal chemistry 19950512

• Differential activities of 1-[(2-hydroxyethoxy)methyl]-6-(phenylthio)thymine derivatives against different human immunodeficiency virus type 1 mutant strains.

  Antimicrobial agents and chemotherapy 19950401

• Structure-activity relationship of ligands of uracil phosphoribosyltransferase from Toxoplasma gondii.

  Biochemical pharmacology 19940817

• HIV resistance to reverse transcriptase inhibitors.

  Biochemical pharmacology 19940120

• Substrate specificity of the Escherichia coli endonuclease III: excision of thymine- and cytosine-derived lesions in DNA produced by radiation-generated free radicals.

  Biochemistry 19931116

• Knocking-out concentrations of HIV-1-specific inhibitors completely suppress HIV-1 infection and prevent the emergence of drug-resistant virus.

  Virology 19931001

• Human immunodeficiency virus type 1 drug-resistance patterns with different 1-[(2-hydroxyethoxy)methyl]-6-(phenylthio)thymine derivatives.

  Molecular pharmacology 19931001

• Effect of human serum on the in vitro anti-HIV-1 activity of 1-[(2-hydroxyethoxy)methyl]-6-(phenylthio)thymine (HEPT) derivatives as related to their lipophilicity and serum protein binding.

  Biochemical pharmacology 19930622

• Analysis of nonnucleoside drug-resistant variants of human immunodeficiency virus type 1 reverse transcriptase.

  Journal of virology 19930401

• Synthesis and antiviral activity of deoxy analogs of 1-[(2-hydroxyethoxy)methyl]-6-(phenylthio)thymine (HEPT) as potent and selective anti-HIV-1 agents.

  Journal of medicinal chemistry 19921211

• Kinetics of inhibition of endogenous human immunodeficiency virus type 1 reverse transcription by 2',3'-dideoxynucleoside 5'-triphosphate, tetrahydroimidazo-[4,5,1-jk][1,4]-benzodiazepin-2(1H)-thion e, and 1-[(2-hydroxyethoxy)methyl]-6-(phenylthio)thymine derivatives.

  The Journal of biological chemistry 19920615

• Structure-activity relationships of 1-[(2-hydroxyethoxy)methyl]-6-(phenylthio)thymine analogues: effect of substitutions at the C-6 phenyl ring and at the C-5 position on anti-HIV-1 activity.

  Journal of medicinal chemistry 19920124

• Specific HIV-1 reverse transcriptase inhibitors.

  Journal of enzyme inhibition 19920101

• Highly potent and selective inhibition of human immunodeficiency virus type 1 by a novel series of 6-substituted acyclouridine derivatives.

  Molecular pharmacology 19910601

• Synthesis and anti-HIV activity of 2-, 3-, and 4-substituted analogues of 1-[(2-hydroxyethoxy)methyl]-6-(phenylthio)thymine (HEPT).

  Journal of medicinal chemistry 19910401

• Specific anti-HIV-1 'acyclonucleosides' which cannot be phosphorylated: synthesis of some deoxy analogues of 1-[(2-hydroxyethoxy)methyl]-6-(phenylthio)thymine.

  Journal of medicinal chemistry 19910401

• Potent and selective inhibition of human immunodeficiency virus type 1 (HIV-1) by 5-ethyl-6-phenylthiouracil derivatives through their interaction with the HIV-1 reverse transcriptase.

  Proceedings of the National Academy of Sciences of the United States of America 19910315

• Processing of DNA base damage by DNA polymerases. Dihydrothymine and beta-ureidoisobutyric acid as models for instructive and noninstructive lesions.

  The Journal of biological chemistry 19910125

• A new class of HIV-1-specific 6-substituted acyclouridine derivatives: synthesis and anti-HIV-1 activity of 5- or 6-substituted analogues of 1-[(2-hydroxyethoxy)methyl]-6-(phenylthio)thymine (HEPT).

  Journal of medicinal chemistry 19910101

• Anti-human immunodeficiency virus type 1 activities and pharmacokinetics of novel 6-substituted acyclouridine derivatives.

  Antimicrobial agents and chemotherapy 19901201

• Inhibition of bioluminescence in Photobacterium phosphoreum by sulfamethizole and its stimulation by thymine.

  Biochimica et biophysica acta 19900626

• Synthesis of biologically active derivatives of D-glucosamine-4-phosphate and 1-thyminyl-D-glucosamine-4,6-disulfate.

  Chemical & pharmaceutical bulletin 19900601

• Mutational specificity of the carcinogen 3-amino-1-methyl-5H-pyrido[4,3-b]-indole in mammalian cells.

  Carcinogenesis 19900501

• Highly specific inhibition of human immunodeficiency virus type 1 by a novel 6-substituted acyclouridine derivative.

  Biochemical and biophysical research communications 19891229

• A novel lead for specific anti-HIV-1 agents: 1-[(2-hydroxyethoxy)methyl]-6-(phenylthio)thymine.

  Journal of medicinal chemistry 19891201

• Synthesis of DNA fragments containing 5,6-dihydrothymine, a major product of thymine gamma radiolysis.

  Nucleic acids research 19880111

• Potentiating effects of N1,N3-diallyluracil, N1,N3-diallylthymine and N1,N3-diallyl-6-methyluracil on pentobarbital-induced sleep and diazepam-induced motor incoordination.

  Chemical & pharmaceutical bulletin 19871201

• Thymine and guanine base specificity of human myeloma proteins with anti-DNA activity.

  The Journal of clinical investigation 19861101

• Synthesis and antiviral activity of (E)-5-(2-bromovinyl)uracil and (E)-5-(2-bromovinyl)uridine.

  Journal of medicinal chemistry 19860201

• Radiation-induced reactions of thymine, thymidine and thymidine-5'-monophosphate in aqueous solutions.

  Nucleic acids symposium series 19820101

• Crystal and molecular structure of a thymine phototrimer.

  Science (New York, N.Y.) 19700911

• Mechanism of triamterene-induced megaloblastosis.

  Annals of internal medicine 19700901

• Crystal and molecular structure of a thymine-thymine adduct.

  Science (New York, N.Y.) 19690411

• A STUDY OF THE CROSS-REACTIVITY OF ANTIPURIN-6-OYL SERUM WITH DEOXYRIBONUCLEIC ACID (DNA).

  The Journal of experimental medicine 19650101

• Thymine and thymidine synthesis.

  Biochimica et biophysica acta 19561001